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Summary Expression Phenotypes Gene Literature (0) GO Terms (1) Nucleotides (180) Proteins (41) Interactants (23) Wiki
XB-GENEPAGE-1006089

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for thoc3 - All

RefSeq mRNAs(0)
Models - Gene (28)
Models - mRNA (32)
mRNAs (3)
ESTs (94)

RefSeq mRNAs (0)

Models - Gene (28)

Source Version Model Species
NCBI 10.0 XBXT10g008109 X. tropicalis
NCBI 10.1 XBXL10_1g12355 X. laevis.L
ENSEMBL 10.0 thoc3 X. tropicalis
JGI 9.1 Xelaev18017283m.g X. laevis.L
Xenbase 9.1 gene25137 X. tropicalis
Xenbase 9.2 gene16484 X. laevis.L
ENSEMBL 9.1 thoc3 X. tropicalis
JGI 7.1 Xetro.C01436 X. tropicalis
JGI 6.0 XeXenL6RMv10031345m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000022316 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3380023 X. tropicalis
JGI 4.1 e_gw1.338.18.1 X. tropicalis
JGI 4.1 e_gw1.338.31.1 X. tropicalis
JGI 4.1 e_gw1.338.56.1 X. tropicalis
JGI 4.1 gw1.338.18.1 X. tropicalis
JGI 4.1 gw1.338.31.1 X. tropicalis
JGI 4.1 gw1.338.56.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3380008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3380018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3380031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3380056 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3380003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3380022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3380006 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_338000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_338000022 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_338000023 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_338000006 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.0 mRNA040289 X. tropicalis
NCBI 10.1 XBmRNA23085 X. laevis.L
ENSEMBL 10.0 ENSXETT00000048296 X. tropicalis
ENSEMBL 10.0 ENSXETT00000084513 X. tropicalis
ENSEMBL 10.0 ENSXETT00000110999 X. tropicalis
ENSEMBL 10.0 ENSXETT00000064990 X. tropicalis
JGI 9.1 Xelaev18017283m X. laevis.L
Xenbase 9.1 rna49821 X. tropicalis
Xenbase 9.2 rna48164 X. laevis.L
ENSEMBL 9.1 ENSXETT00000048296 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084513 X. tropicalis
JGI 7.1 Xetro.C01436.1 X. tropicalis
JGI 6.0 XeXenL6RMv10031345m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_3380023 X. tropicalis
ENSEMBL 4.1 ENSXETT00000048296 X. tropicalis
JGI 4.1 e_gw1.338.18.1 X. tropicalis
JGI 4.1 e_gw1.338.31.1 X. tropicalis
JGI 4.1 e_gw1.338.56.1 X. tropicalis
JGI 4.1 gw1.338.18.1 X. tropicalis
JGI 4.1 gw1.338.31.1 X. tropicalis
JGI 4.1 gw1.338.56.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3380008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3380018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3380031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3380056 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3380003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3380022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3380006 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_338000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_338000022 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_338000023 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_338000006 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
NM_001127922 X. tropicalis
XM_004912853 X. tropicalis
XM_018252196 X. laevis.L

ESTs (94)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9018888 EL867944 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9012501 EL857770 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9010056 EL854482 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8885074 EL841752 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8883720 EL839653 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8908679 EL803048 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8923649 EL667885 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8931210 EL666237 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8965179 EL653654 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
xtbs11G20 CN076081 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
st31b14 DC172281 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st21d15 DC169167 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT11255 CX311338 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO5680 CX937812 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7638193 CX408241 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7593446 CX327361 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7613025 CX405322 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO2874 CX933418 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7536427 CX477692 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565725 CX482262 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7562172 CX466326 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA008k19 CR445361 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:9018888 EL867945 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9010056 EL854483 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8885074 EL841753 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8883720 EL839654 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8908679 EL803049 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8923649 EL667884 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
xtbs11G20 CN076080 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
rst32b14 DC142272 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst31b14 DC141985 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst21d15 DC138980 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT11255 CX311337 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO5680 CX937811 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7593446 CX327360 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO2874 CX933417 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7670495 CX877528 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7735215 DN021014 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7536427 CX477691 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522134 CX471320 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521002 CX469505 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7527209 CX444440 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7523789 CX437605 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7531849 CX421909 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7638193 CX408240 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7613025 CX405321 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA072i24 CR432109 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA075a09 CR429520 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA033f05 CR426497 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA009p20 CR415076 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr44I06 CN116364 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr44E14 CN116330 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr37M21 CN111521 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr36P15 CN111250 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr31H05 CN108248 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr21J07 CN103699 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr14K20 CN098307 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr10E13 CN095498 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas057m08 BX761952 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas123h07 BX759567 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas119e17 BX756384 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas104b12 BX754141 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA064i01 BX729585 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu121o18 BX702269 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu073i07 BX699077 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu119j11 BX698178 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu127k07 BX697430 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu083o21 BX692478 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu105n01 BX691118 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:4462692 BG885577 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
xl314h10 DC127361 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl289m10 DC120278 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk155m17ex DC062770 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk79d10ex DC060705 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk67e15ex DC056554 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8642474 EB728104 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
XL460h10ex BP690091 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7299691 CO389756 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL427h07ex BP677643 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998C1414200 BX854581 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL141n09 BJ093238 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL141d17 BJ093037 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL103h21 BJ057858 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL025l19 BJ033979 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6327428 CA974741 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6631814 BU906774 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:4678189 BI477916 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4678508 BI477738 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4059563 BG018755 5' X. laevis.L Wellcome CRC pCS2+ st19-26 whole organism NF stage 19 to NF stage 26
IMAGE:3378174 BE506212 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
PBX0132G06 AW643778 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxlk79d10ex DC027229 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:4678508 BI445721 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3378174 BE189057 3' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage