Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (3) Nucleotides (65) Proteins (38) Interactants (11) Wiki
XB-GENEPAGE-1006052

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for syt9 - All

RefSeq mRNAs(6)
Models - Gene (23)
Models - mRNA (26)
mRNAs (6)
ESTs (5)

RefSeq mRNAs (6)

Accession Version name Length Protein Species
XM_002938037 XM_002938037. synaptotagmin-9 isoform X1 2706 bp XP_002938083 X. tropicalis
XM_004913448 XM_004913448.4 synaptotagmin-9 isoform X2 1806 bp XP_004913505 X. tropicalis
XM_041560904 XM_041560904.1 XP_041416838.1 synaptotagmin-9 isoform X1 2931 bp XP_041416838 X. laevis.S
XM_041560905 XM_041560905.1 XP_041416839.1 synaptotagmin-9 isoform X2 2070 bp XP_041416839 X. laevis.S
XM_041589909 XM_041589909.1 XP_041445843.1 synaptotagmin-9 isoform X2 1981 bp XP_041445843 X. laevis.L
XM_018257436 XM_018257436.2 synaptotagmin-9 isoform X1 2659 bp XP_018112925 X. laevis.L

Models - Gene (23)

Source Version Model Species
NCBI 10.0 XBXT10g016366 X. tropicalis
NCBI 10.1 XBXL10_1g17858 X. laevis.L
NCBI 10.1 XBXL10_1g20844 X. laevis.S
ENSEMBL 10.0 syt9 X. tropicalis
JGI 9.1 Xelaev18021950m.g X. laevis.L
JGI 9.1 Xelaev18024422m.g X. laevis.S
Xenbase 9.1 gene17360 X. tropicalis
Xenbase 9.2 gene1545 X. laevis.L
ENSEMBL 9.1 cryba4 X. tropicalis
JGI 7.1 Xetro.D00365 X. tropicalis
JGI 6.0 XeXenL6RMv10014895m.g X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_3350016 X. tropicalis
JGI 4.1 e_gw1.335.21.1 X. tropicalis
JGI 4.1 e_gw1.335.33.1 X. tropicalis
JGI 4.1 e_gw1.335.5.1 X. tropicalis
JGI 4.1 e_gw1.335.56.1 X. tropicalis
JGI 4.1 gw1.335.21.1 X. tropicalis
JGI 4.1 gw1.335.33.1 X. tropicalis
JGI 4.1 gw1.335.5.1 X. tropicalis
JGI 4.1 gw1.335.56.1 X. tropicalis
JGI 4.1 MOL_estExt_fgenesh1_pg.C_3350016 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3350011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_335000016 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
NCBI 10.0 mRNA080955 X. tropicalis
NCBI 10.1 XBmRNA32996 X. laevis.L
NCBI 10.1 XBmRNA38402 X. laevis.S
ENSEMBL 10.0 ENSXETT00000113538 X. tropicalis
ENSEMBL 10.0 ENSXETT00000062098 X. tropicalis
ENSEMBL 10.0 ENSXETT00000117058 X. tropicalis
JGI 9.1 Xelaev18021950m X. laevis.L
JGI 9.1 Xelaev18024422m X. laevis.S
Xenbase 9.1 rna37462 X. tropicalis
Xenbase 9.2 rna4484 X. laevis.L
ENSEMBL 9.1 ENSXETT00000062098 X. tropicalis
JGI 7.1 Xetro.D00365.1 X. tropicalis
JGI 7.1 Xetro.D00365.2 X. tropicalis
JGI 6.0 XeXenL6RMv10014895m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_3350016 X. tropicalis
JGI 4.1 e_gw1.335.21.1 X. tropicalis
JGI 4.1 e_gw1.335.33.1 X. tropicalis
JGI 4.1 e_gw1.335.5.1 X. tropicalis
JGI 4.1 e_gw1.335.56.1 X. tropicalis
JGI 4.1 gw1.335.21.1 X. tropicalis
JGI 4.1 gw1.335.33.1 X. tropicalis
JGI 4.1 gw1.335.5.1 X. tropicalis
JGI 4.1 gw1.335.56.1 X. tropicalis
JGI 4.1 MOL_estExt_fgenesh1_pg.C_3350016 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3350011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_335000016 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
XM_002938037 X. tropicalis
XM_004913448 X. tropicalis
XM_018257436 X. laevis.L
XM_041589909 X. laevis.L
XM_041560905 X. laevis.S
XM_041560904 X. laevis.S

ESTs (5)

Clone Accession 5'/3' Species Library Anatomy Stage
THdA029d02 CR571267 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr19P16 CN101903 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7690765 CX915548 3' X. tropicalis NIH_XGC_tropTe4 testis frog
THdA029d02 CR571268 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr19P16 CN101902 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36