Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (4) Nucleotides (72) Proteins (28) Interactants (104) Wiki
XB-GENEPAGE-1004402

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ppargc1b - All

RefSeq mRNAs(3)
Models - Gene (16)
Models - mRNA (18)
mRNAs (3)
ESTs (12)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
XM_002936698 XM_002936698.5 peroxisome proliferator-activated receptor gamma coactivator 1-beta 9150 bp XP_002936744 X. tropicalis
XM_018252190 XM_018252190.2 peroxisome proliferator-activated receptor gamma coactivator 1-beta 3656 bp XP_018107679 X. laevis.L
XM_018256128 XM_018256128.2 peroxisome proliferator-activated receptor gamma coactivator 1-beta 2986 bp XP_018111617 X. laevis.S

Models - Gene (16)

Source Version Model Species
NCBI 10.0 XBXT10g013550 X. tropicalis
NCBI 10.1 XBXL10_1g16447 X. laevis.S
NCBI 10.1 XBXL10_1g12341 X. laevis.L
ENSEMBL 10.0 ppargc1b X. tropicalis
JGI 9.1 Xelaev18021404m.g X. laevis.S
JGI 9.1 Xelaev18017260m.g X. laevis.L
Xenbase 9.1 gene8323 X. tropicalis
Xenbase 9.2 gene9687 X. laevis.S
Xenbase 9.2 gene44295 X. laevis.L
ENSEMBL 9.1 ppargc1b X. tropicalis
JGI 7.1 Xetro.C01403 X. tropicalis
JGI 6.0 XeXenL6RMv10020706m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000012711 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2300002 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2300002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_230000002 X. tropicalis

mRNAs based on gene models(18)

Source Version Model Species
NCBI 10.0 mRNA067094 X. tropicalis
NCBI 10.1 XBmRNA23066 X. laevis.L
NCBI 10.1 XBmRNA30886 X. laevis.S
ENSEMBL 10.0 ENSXETT00000098215 X. tropicalis
JGI 9.1 Xelaev18017260m X. laevis.L
JGI 9.1 Xelaev18021404m X. laevis.S
Xenbase 9.1 rna26890 X. tropicalis
Xenbase 9.2 rna88127 X. laevis.L
Xenbase 9.2 rna28184 X. laevis.S
ENSEMBL 9.1 ENSXETT00000069143 X. tropicalis
ENSEMBL 9.1 ENSXETT00000027806 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098215 X. tropicalis
JGI 7.1 Xetro.C01403.1 X. tropicalis
JGI 6.0 XeXenL6RMv10020706m X. laevis.S
JGI 4.1 estExt_fgenesh1_pg.C_2300002 X. tropicalis
ENSEMBL 4.1 ENSXETT00000027806 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2300002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_230000002 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
XM_002936698 X. tropicalis
XM_018256128 X. laevis.S
XM_018252190 X. laevis.L

ESTs (12)

Clone Accession 5'/3' Species Library Anatomy Stage
XZT5133 CX414046 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8905246 EL797136 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
TNeu111p06 AL793884 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu111p06 BX691390 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
CAAN11707 CX927782 3' X. tropicalis NIH_XGC_tropTe4 testis frog
XZT5133 CX414045 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8905246 EL797137 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:5571716 BQ736706 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6880045 CB207625 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL041l02 BJ037826 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6880045 CB561564 3' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL041l02 BJ052494 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15