Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (2) GO Terms (7) Nucleotides (119) Proteins (47) Interactants (94) Wiki
XB-GENEPAGE-1003599

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for top3a - Xenopus tropicalis

RefSeq mRNAs(1)
Models - Gene (21)
Models - mRNA (30)
mRNAs (2)
ESTs (12)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
XM_004918070 XM_004918070.4 DNA topoisomerase 3-alpha 3591 bp XP_004918127 X. tropicalis

Models - Gene (21)

Source Version Model Species
NCBI 10.0 XBXT10g014125 X. tropicalis
ENSEMBL 10.0 top3a X. tropicalis
Xenbase 9.1 gene6885 X. tropicalis
ENSEMBL 9.1 top3a X. tropicalis
JGI 8.0 Xetrov14038857m.g X. tropicalis
JGI 7.1 Xetro.I01568 X. tropicalis
ENSEMBL 4.1 ENSXETG00000005765 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740048 X. tropicalis
JGI 4.1 e_gw1.174.173.1 X. tropicalis
JGI 4.1 e_gw1.174.202.1 X. tropicalis
JGI 4.1 e_gw1.174.266.1 X. tropicalis
JGI 4.1 gw1.174.173.1 X. tropicalis
JGI 4.1 gw1.174.202.1 X. tropicalis
JGI 4.1 gw1.174.266.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1740040 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740173 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740202 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740266 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1740020 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000049 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_174000021 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.0 mRNA069904 X. tropicalis
ENSEMBL 10.0 ENSXETT00000094193 X. tropicalis
ENSEMBL 10.0 ENSXETT00000012696 X. tropicalis
Xenbase 9.1 rna22218 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094193 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087080 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072755 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091497 X. tropicalis
ENSEMBL 9.1 ENSXETT00000012696 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081854 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093531 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086482 X. tropicalis
JGI 8.0 Xetrov14038857m X. tropicalis
JGI 7.1 Xetro.I01568.2 X. tropicalis
JGI 7.1 Xetro.I01568.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740048 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012696 X. tropicalis
JGI 4.1 e_gw1.174.173.1 X. tropicalis
JGI 4.1 e_gw1.174.202.1 X. tropicalis
JGI 4.1 e_gw1.174.266.1 X. tropicalis
JGI 4.1 gw1.174.173.1 X. tropicalis
JGI 4.1 gw1.174.202.1 X. tropicalis
JGI 4.1 gw1.174.266.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1740040 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740173 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740202 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740266 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1740020 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000049 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_174000021 X. tropicalis

mRNAs from cDNA libraries (2)

Clone Accession Species Library Anatomy Stage
IMAGE:8917144 BC157663 X. tropicalis NICHD_XGC_tropTe1 testis frog
XM_004918070 X. tropicalis

ESTs (12)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8886843 EL843862 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8917144 EL830548 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7689138 CX913083 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688315 CX910550 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TGas112h08 AL962567 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas135i19 AL957672 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8886843 EL843863 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8917144 EL830549 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7847049 DT530870 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7689138 CX913082 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TTbA064h08 CR413849 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas135i19 BX758773 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12