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Summary Expression Phenotypes Gene Literature (0) GO Terms (1) Nucleotides (101) Proteins (42) Interactants (3) Wiki
XB-GENEPAGE-1003302

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ccdc171 - All

RefSeq mRNAs(3)
Models - Gene (25)
Models - mRNA (31)
mRNAs (6)
ESTs (22)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
XM_018257253 XM_018257253.2 coiled-coil domain-containing protein 171 isoform X3 3376 bp XP_018112742 X. laevis.S
XM_018257235 XM_018257235.2 coiled-coil domain-containing protein 171 isoform X1 4157 bp XP_018112724 X. laevis.S
XM_018257244 XM_018257244.2 coiled-coil domain-containing protein 171 isoform X2 4148 bp XP_018112733 X. laevis.S

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g000793 X. tropicalis
Xenbase 9.2 gene35417 X. laevis.L
NCBI 10.1 XBXL10_1g1962 X. laevis.S
ENSEMBL 10.0 ccdc171 X. tropicalis
JGI 9.1 Xelaev18006712m.g X. laevis.L
Xenbase 9.1 gene28993 X. tropicalis
ENSEMBL 9.1 ccdc171 X. tropicalis
JGI 7.1 Xetro.A01860 X. tropicalis
JGI 6.0 XeXenL6RMv10012248m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000009178 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1620039 X. tropicalis
JGI 4.1 gw1.162.17.1 X. tropicalis
JGI 4.1 e_gw1.162.17.1 X. tropicalis
JGI 4.1 e_gw1.162.35.1 X. tropicalis
JGI 4.1 e_gw1.162.66.1 X. tropicalis
JGI 4.1 e_gw1.162.89.1 X. tropicalis
JGI 4.1 gw1.162.35.1 X. tropicalis
JGI 4.1 gw1.162.66.1 X. tropicalis
JGI 4.1 gw1.162.89.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1620018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1620035 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1620066 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1620089 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_162000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_162000039 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.0 mRNA003931 X. tropicalis
NCBI 10.1 XBmRNA3479 X. laevis.S
ENSEMBL 10.0 ENSXETT00000020152 X. tropicalis
JGI 9.1 Xelaev18006712m X. laevis.L
Xenbase 9.1 rna55968 X. tropicalis
Xenbase 9.2 rna75389 X. laevis.L
ENSEMBL 9.1 ENSXETT00000080081 X. tropicalis
ENSEMBL 9.1 ENSXETT00000020152 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070218 X. tropicalis
JGI 7.1 Xetro.A01860.1 X. tropicalis
JGI 6.0 XeXenL6RMv10012248m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_1620039 X. tropicalis
ENSEMBL 4.1 ENSXETT00000004937 X. tropicalis
ENSEMBL 4.1 ENSXETT00000020146 X. tropicalis
ENSEMBL 4.1 ENSXETT00000020152 X. tropicalis
ENSEMBL 4.1 ENSXETT00000052916 X. tropicalis
ENSEMBL 4.1 ENSXETT00000020144 X. tropicalis
JGI 4.1 e_gw1.162.17.1 X. tropicalis
JGI 4.1 e_gw1.162.35.1 X. tropicalis
JGI 4.1 e_gw1.162.66.1 X. tropicalis
JGI 4.1 e_gw1.162.89.1 X. tropicalis
JGI 4.1 gw1.162.17.1 X. tropicalis
JGI 4.1 gw1.162.35.1 X. tropicalis
JGI 4.1 gw1.162.66.1 X. tropicalis
JGI 4.1 gw1.162.89.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1620018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1620035 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1620066 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1620089 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_162000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_162000039 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
TNeu129f19 CR942745 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas138i03 CR855650 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XM_002935670 X. tropicalis
XM_018257253 X. laevis.S
XM_018257244 X. laevis.S
XM_018257235 X. laevis.S

ESTs (22)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8921877 EL836069 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8915345 EL827732 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8853108 EL827510 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8857850 EL821946 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8857482 EL821179 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
CAAO7512 CX941133 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO3646 CX934135 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7707099 CX958841 5' X. tropicalis NIH_XGC_tropTe5 testis frog
THdA016b18 CR564299 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas138i03 AL966577 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu129f19 AL802703 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas059a20 AL674761 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8915345 EL827733 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8853108 EL827511 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8857850 EL821947 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8857482 EL821180 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
CAAO7512 CX941132 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO3646 CX934134 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7707099 CX958840 3' X. tropicalis NIH_XGC_tropTe5 testis frog
THdA016b18 CR564300 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas138i03 BX757414 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu129f19 BX697238 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21