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Summary Expression Phenotypes Gene Literature (0) GO Terms (5) Nucleotides (405) Proteins (52) Interactants (45) Wiki
XB-GENEPAGE-1003203

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ccdc47 - Xenopus laevis

RefSeq mRNAs(2)
Models - Gene (8)
Models - mRNA (8)
mRNAs (3)
ESTs (94)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001093589 NM_001093589.1 PAT complex subunit CCDC47 precursor 2728 bp NP_001087058 X. laevis.S
XM_018234856 XM_018234856.2 PAT complex subunit CCDC47-like 2457 bp XP_018090345 X. laevis.L

Models - Gene (8)

Source Version Model Species
NCBI 10.1 XBXL10_1g42420 X. laevis.S
NCBI 10.1 XBXL10_1g39209 X. laevis.L
JGI 9.1 Xelaev18046085m.g X. laevis.S
JGI 9.1 Xelaev18043335m.g X. laevis.L
Xenbase 9.2 gene7442 X. laevis.S
Xenbase 9.2 gene11489 X. laevis.L
JGI 7.2 Xelaev16013407m.g X. laevis.S
JGI 6.0 XeXenL6RMv10008100m.g X. laevis.S

mRNAs based on gene models(8)

Source Version Model Species
NCBI 10.1 XBmRNA73900 X. laevis.L
NCBI 10.1 XBmRNA79717 X. laevis.S
JGI 9.1 Xelaev18043335m X. laevis.L
JGI 9.1 Xelaev18046085m X. laevis.S
Xenbase 9.2 rna33385 X. laevis.L
Xenbase 9.2 rna21686 X. laevis.S
JGI 7.2 Xelaev16013407m X. laevis.S
JGI 6.0 XeXenL6RMv10008100m X. laevis.S

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
IMAGE:5516296 BC077957 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001093589 X. laevis.S
XM_018234856 X. laevis.L

ESTs (94)

Clone Accession 5'/3' Species Library Anatomy Stage
xl244h14 DC107108 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl314o13 DC127483 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl274d21 DC115900 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk145a13ex DC050138 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk123a09ex DC042984 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk122d03ex DC042708 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk110m16ex DC039088 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk132j18ex DC046098 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8820678 EG583560 5' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8321163 DY569984 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8318056 DY550823 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8321797 DY545364 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7978849 DR720606 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL499k21ex BP709942 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL498i04ex BP709615 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL508n15ex BP703560 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7296204 CO389073 5' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL419o09ex BP675501 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998P2214200 BX853536 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGp998G098394 BX844775 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
XL198g19 BJ621709 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL189j15 BJ619544 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL141f11 BJ093072 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL106d16 BJ068262 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL086o05 BJ066678 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL069l20 BJ062971 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL023a04 BJ035400 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL031c24 BJ034879 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL038d03 BJ039686 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL041f10 BJ037711 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5516296 CF286361 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6865497 CA988356 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6325870 CA973590 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6323815 CA972170 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6866488 CA794131 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6866230 CA794037 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5161917 CA791369 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6632134 BU907042 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5162199 BQ397848 5' X. laevis.S Soares NXEG egg unfertilized egg stage
IMAGE:4783954 BM262306 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4085559 BI449098 5' X. laevis.S Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3517207 BG348007 5' X. laevis.S Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGE:3517047 BG346787 5' X. laevis.S Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGE:3437091 BF615509 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:3437216 BF614339 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:3548333 BF613503 5' X. laevis.S Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3430275 BF611351 5' X. laevis.S Wellcome CRC pcDNAI egg egg unfertilized egg stage
IMAGE:3381628 BF047233 5' X. laevis.S Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3747660 BE680279 5' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
AW764974 AW764974 5' X. laevis.S Xenopus laevis tadpole stage 24 whole organism NF stage 24
PBX0164C05 AW646470 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0129C07 AW643485 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0114C04 AW642128 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0079E01 AW639178 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0064C10 AW637942 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0044H06 AW636280 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl293d07 DC086413 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl293b05 DC086378 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl244h14 DC072703 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl314o13 DC092370 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl274d21 DC080977 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk132j18ex DC012918 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk110m16ex DC006148 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk145a13ex DC016819 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk123a09ex DC009897 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk122d03ex DC009636 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8820678 EG570670 3' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XL499k21ex BP741787 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL498k21ex BP741513 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL498i04ex BP741467 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL514m24ex BP738011 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL508n15ex BP736460 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL485f07ex BP731668 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL419o09ex BP712959 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:7296204 CO389240 3' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL198g19 BJ638421 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL189j15 BJ636180 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL141f11 BJ097358 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL057a16 BJ092669 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL106d16 BJ085536 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL086o05 BJ084014 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL069l20 BJ080896 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL038d03 BJ053247 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL041f10 BJ052385 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL031c24 BJ051241 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL007f08 BJ046422 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL023a04 BJ050023 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5162199 BQ397847 3' X. laevis.S Soares NXEG egg unfertilized egg stage
IMAGE:4783954 BM262009 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3517207 BG413777 3' X. laevis.S Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGE:3430275 BF612944 3' X. laevis.S Wellcome CRC pcDNAI egg egg unfertilized egg stage
IMAGE:3437216 BF232404 3' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:3747660 BF025372 3' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
AW764623 AW764623 3' X. laevis.S Xenopus laevis tadpole stage 24 whole organism NF stage 24