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Summary Expression Phenotypes Gene Literature (0) GO Terms (16) Nucleotides (296) Proteins (62) Interactants (34) Wiki
XB-GENEPAGE-1002301

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ddx47 - All

RefSeq mRNAs(3)
Models - Gene (33)
Models - mRNA (49)
mRNAs (9)
ESTs (171)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
NM_001091698 NM_001091698.1 DEAD-box helicase 47 L homeolog 1744 bp NP_001085167 X. laevis.L
XM_041561591 XM_041561591.1 XP_041417525.1 probable ATP-dependent RNA helicase DDX47 isoform X1 1776 bp XP_041417525 X. laevis.S
XM_041561592 XM_041561592.1 XP_041417526.1 probable ATP-dependent RNA helicase DDX47 isoform X2 1635 bp XP_041417526 X. laevis.S

Models - Gene (33)

Source Version Model Species
NCBI 10.0 XBXT10g008420 X. tropicalis
NCBI 10.1 XBXL10_1g19611 X. laevis.L
NCBI 10.1 XBXL10_1g21964 X. laevis.S
ENSEMBL 10.0 ddx47 X. tropicalis
JGI 9.1 Xelaev18023566m.g X. laevis.L
JGI 9.1 Xelaev18025576m.g X. laevis.S
Xenbase 9.1 gene3701 X. tropicalis
Xenbase 9.2 gene14760 X. laevis.L
Xenbase 9.2 gene4257 X. laevis.S
ENSEMBL 9.1 ddx47 X. tropicalis
JGI 8.0 Xetrov14019913m.g X. tropicalis
JGI 7.1 Xetro.D01476 X. tropicalis
JGI 7.2 Xelaev16032840m.g X. laevis.L
JGI 6.0 XeXenL6RMv10023605m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000022984 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1090077 X. tropicalis
JGI 4.1 e_gw1.109.156.1 X. tropicalis
JGI 4.1 e_gw1.109.8.1 X. tropicalis
JGI 4.1 e_gw1.109.95.1 X. tropicalis
JGI 4.1 gw1.109.156.1 X. tropicalis
JGI 4.1 gw1.109.8.1 X. tropicalis
JGI 4.1 gw1.109.95.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1090044 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1090008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1090094 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1090153 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1090026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1090076 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1090028 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_109000026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_109000076 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_109000077 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_109000028 X. tropicalis

mRNAs based on gene models(49)

Source Version Model Species
NCBI 10.0 mRNA041788 X. tropicalis
NCBI 10.1 XBmRNA36291 X. laevis.L
NCBI 10.1 XBmRNA40806 X. laevis.S
ENSEMBL 10.0 ENSXETT00000070131 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083227 X. tropicalis
ENSEMBL 10.0 ENSXETT00000049718 X. tropicalis
JGI 9.1 Xelaev18023566m X. laevis.L
JGI 9.1 Xelaev18025576m X. laevis.S
Xenbase 9.1 rna12127 X. tropicalis
Xenbase 9.2 rna43047 X. laevis.L
Xenbase 9.2 rna12402 X. laevis.S
ENSEMBL 9.1 ENSXETT00000090514 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083227 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090542 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101356 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093410 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070131 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073111 X. tropicalis
ENSEMBL 9.1 ENSXETT00000049718 X. tropicalis
ENSEMBL 9.1 ENSXETT00000049720 X. tropicalis
ENSEMBL 9.1 ENSXETT00000063144 X. tropicalis
JGI 8.0 Xetrov14019913m X. tropicalis
JGI 7.1 Xetro.D01476.4 X. tropicalis
JGI 7.1 Xetro.D01476.5 X. tropicalis
JGI 7.1 Xetro.D01476.2 X. tropicalis
JGI 7.1 Xetro.D01476.3 X. tropicalis
JGI 7.1 Xetro.D01476.1 X. tropicalis
JGI 7.2 Xelaev16032840m X. laevis.L
JGI 6.0 XeXenL6RMv10023605m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_1090077 X. tropicalis
ENSEMBL 4.1 ENSXETT00000049718 X. tropicalis
ENSEMBL 4.1 ENSXETT00000049720 X. tropicalis
JGI 4.1 e_gw1.109.156.1 X. tropicalis
JGI 4.1 e_gw1.109.8.1 X. tropicalis
JGI 4.1 e_gw1.109.95.1 X. tropicalis
JGI 4.1 gw1.109.156.1 X. tropicalis
JGI 4.1 gw1.109.8.1 X. tropicalis
JGI 4.1 gw1.109.95.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1090044 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1090008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1090094 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1090153 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1090026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1090076 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1090028 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_109000026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_109000076 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_109000077 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_109000028 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
TNeu061e01 CU075713 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5307480 BC062498 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
XM_002934729 X. tropicalis
IMAGE:6632287 BC072214 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6636934 BC068844 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
NM_001091698 X. laevis.L
NM_001091182 X. laevis.S
XM_041561592 X. laevis.S
XM_041561591 X. laevis.S

ESTs (171)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9019776 EL868904 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9013840 EL860151 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8886515 EL843278 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8913804 EL826081 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8935833 EL637753 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
st34k10 DC173216 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7624686 CX402307 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7554230 CX492856 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7602570 CX393641 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7542426 CX449984 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7536244 CX477416 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7535045 CX429391 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568946 CX457885 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561976 CX465640 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7558270 CX497646 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7720749 CX995390 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7571185 CX511660 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567177 CX507715 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7601663 DR892828 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7805491 DR841907 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7750544 DN049926 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7738813 DN027468 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7720733 CX995267 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7712414 CX969917 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7712451 CX969506 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7709013 CX962696 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7671479 CX879704 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7665234 CX850429 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7665137 CX850082 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
TTbA070c15 CR449652 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA018l15 CR418109 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7091248 CK653677 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TGas102g09 AL971113 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas089n04 AL959806 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas073n04 AL784131 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas044k03 AL655062 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas046h21 AL652110 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA056p24 BX725737 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA017e08 BX714385 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu101o07 AL802858 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu138p05 AL796887 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076d21 AL778668 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu055m21 AL676846 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu061e01 AL673814 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu038o05 AL657700 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu034e12 AL657200 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu022a05 AL638550 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu021j18 AL636418 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu001d04 AL634400 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6991842 CF240128 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6989407 CF218761 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6984705 CF150862 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:5309031 BQ391473 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5307480 BQ388476 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:9019776 EL868905 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9013840 EL860152 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8886515 EL843279 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8913804 EL826082 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8935833 EL637752 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
rst34k10 DC142961 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7671479 CX879703 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7670360 CX877917 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7665234 CX850428 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7665137 CX850081 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7602570 DR893108 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7601663 DR892827 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7535045 DR888683 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7805491 DR841906 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7750544 DN049925 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7738813 DN027467 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7720749 CX995389 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7720733 CX995266 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7712414 CX969916 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7712451 CX969505 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7709013 CX962695 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7571185 CX511659 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7554230 CX492855 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7536244 CX477415 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568946 CX457884 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542426 CX449983 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA070c15 CR449653 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA023d08 CR441618 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA018l15 CR418110 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7091248 CN325876 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TGas102g09 BX753768 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas089n04 BX751580 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas073n04 BX749949 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA056p24 BX725738 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA017e08 BX714386 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu101o07 BX694493 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu055m21 BX688744 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076d21 BX685648 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu061e01 BX684564 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5309031 BQ391472 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5307480 BQ388475 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
xl284n11 DC118859 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk125m22ex DC043889 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk164k21ex DC065589 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk55h05ex DC034203 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5