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Summary Expression Phenotypes Gene Literature (0) GO Terms (1) Nucleotides (216) Proteins (70) Interactants (30) Wiki
XB-GENEPAGE-1002061

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for herc1 - Xenopus tropicalis

RefSeq mRNAs(7)
Models - Gene (30)
Models - mRNA (33)
mRNAs (7)
ESTs (68)

RefSeq mRNAs (7)

Accession Version name Length Protein Species
XM_018092391 XM_018092391.2 probable E3 ubiquitin-protein ligase HERC1 isoform X7 12526 bp XP_017947880 X. tropicalis
XM_018092387 XM_018092387.2 probable E3 ubiquitin-protein ligase HERC1 isoform X1 15219 bp XP_017947876 X. tropicalis
XM_018092388 XM_018092388.2 probable E3 ubiquitin-protein ligase HERC1 isoform X2 15198 bp XP_017947877 X. tropicalis
XM_018092389 XM_018092389.2 probable E3 ubiquitin-protein ligase HERC1 isoform X3 15195 bp XP_017947878 X. tropicalis
XM_018092390 XM_018092390.2 probable E3 ubiquitin-protein ligase HERC1 isoform X4 15195 bp XP_017947879 X. tropicalis
XM_004915969 XM_004915969.4 probable E3 ubiquitin-protein ligase HERC1 isoform X5 15165 bp XP_004916026 X. tropicalis
XM_012966876 XM_012966876.3 probable E3 ubiquitin-protein ligase HERC1 isoform X6 15147 bp XP_012822330 X. tropicalis

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g016350 X. tropicalis
ENSEMBL 10.0 herc1 X. tropicalis
Xenbase 9.1 gene16822 X. tropicalis
ENSEMBL 9.1 herc1 X. tropicalis
JGI 7.1 Xetro.G00959 X. tropicalis
ENSEMBL 4.1 ENSXETG00000009734 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1030044 X. tropicalis
JGI 4.1 e_gw1.103.132.1 X. tropicalis
JGI 4.1 e_gw1.103.133.1 X. tropicalis
JGI 4.1 e_gw1.103.173.1 X. tropicalis
JGI 4.1 e_gw1.103.181.1 X. tropicalis
JGI 4.1 e_gw1.103.244.1 X. tropicalis
JGI 4.1 e_gw1.103.32.1 X. tropicalis
JGI 4.1 e_gw1.103.38.1 X. tropicalis
JGI 4.1 e_gw1.103.65.1 X. tropicalis
JGI 4.1 gw1.103.132.1 X. tropicalis
JGI 4.1 gw1.103.133.1 X. tropicalis
JGI 4.1 gw1.103.173.1 X. tropicalis
JGI 4.1 gw1.103.181.1 X. tropicalis
JGI 4.1 gw1.103.244.1 X. tropicalis
JGI 4.1 gw1.103.32.1 X. tropicalis
JGI 4.1 gw1.103.38.1 X. tropicalis
JGI 4.1 gw1.103.65.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1030028 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030130 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030131 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030242 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1030013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_103000044 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_103000013 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.0 mRNA080825 X. tropicalis
ENSEMBL 10.0 ENSXETT00000021476 X. tropicalis
Xenbase 9.1 rna36668 X. tropicalis
ENSEMBL 9.1 ENSXETT00000021476 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092856 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086623 X. tropicalis
JGI 7.1 Xetro.G00959.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1030044 X. tropicalis
ENSEMBL 4.1 ENSXETT00000021476 X. tropicalis
ENSEMBL 4.1 ENSXETT00000021459 X. tropicalis
JGI 4.1 e_gw1.103.132.1 X. tropicalis
JGI 4.1 e_gw1.103.133.1 X. tropicalis
JGI 4.1 e_gw1.103.173.1 X. tropicalis
JGI 4.1 e_gw1.103.181.1 X. tropicalis
JGI 4.1 e_gw1.103.244.1 X. tropicalis
JGI 4.1 e_gw1.103.32.1 X. tropicalis
JGI 4.1 e_gw1.103.38.1 X. tropicalis
JGI 4.1 e_gw1.103.65.1 X. tropicalis
JGI 4.1 gw1.103.132.1 X. tropicalis
JGI 4.1 gw1.103.133.1 X. tropicalis
JGI 4.1 gw1.103.173.1 X. tropicalis
JGI 4.1 gw1.103.181.1 X. tropicalis
JGI 4.1 gw1.103.244.1 X. tropicalis
JGI 4.1 gw1.103.32.1 X. tropicalis
JGI 4.1 gw1.103.38.1 X. tropicalis
JGI 4.1 gw1.103.65.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1030028 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030130 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030131 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1030242 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1030013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_103000044 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_103000013 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
XM_018092391 X. tropicalis
XM_012966876 X. tropicalis
XM_004915969 X. tropicalis
XM_018092390 X. tropicalis
XM_018092389 X. tropicalis
XM_018092388 X. tropicalis
XM_018092387 X. tropicalis

ESTs (68)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9013274 EL859094 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8862916 EL709472 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8863238 EL698986 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8960011 EL658640 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8943048 EG653345 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:7606903 CX366923 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7851422 DT390731 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7569056 CX457650 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7757321 DR874720 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7738015 DN025819 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7719164 CX982336 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7718399 CX980610 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7715602 CX976000 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7713602 CX971949 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7711235 CX967336 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7710876 CX967155 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7694206 CX922204 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692365 CX918158 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690500 CX915005 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690005 CX914182 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689530 CX913850 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688449 CX911192 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687044 CX908592 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7669932 CX877266 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7656359 CX827188 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653020 CX821601 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7646767 CX804246 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646364 CX804096 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644713 CX800887 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7643033 CX798148 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7640703 CX793516 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7622478 CX371372 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA045o16 CR449429 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA059o13 CR437664 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA062a06 CR424998 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA038i08 BX719946 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu130p23 AL797690 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:9013274 EL859095 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8862916 EL709471 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8863238 EL698985 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7851422 DT390730 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7694206 CX922203 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692365 CX918157 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689530 CX913849 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687044 CX908591 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7653020 CX821600 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7622114 DR898933 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7757321 DR874719 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7646364 CX804095 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645877 CX803024 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644713 CX800886 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7640703 CX793515 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7738015 DN025818 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7719164 CX982335 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7718399 CX980609 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7715602 CX975999 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7713602 CX971948 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7711235 CX967335 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7710876 CX967154 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7690500 CX915004 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690005 CX914181 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688449 CX911191 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7669932 CX877265 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7646767 CX804245 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7569056 CX457649 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7622478 CX371371 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA054d15 BX721253 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu130p23 BX701948 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21