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Summary Expression Phenotypes Gene Literature (3) GO Terms (21) Nucleotides (154) Proteins (47) Interactants (209) Wiki
XB-GENEPAGE-1001372

Show:     All X. tropicalis X. laevis

Nucleotide sequences for rnf138 - All

RefSeq mRNAs(3)
Models - Gene (33)
Models - mRNA (34)
mRNAs (9)
ESTs (17)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001016429 NM_001016429.3 E3 ubiquitin-protein ligase RNF138 885 bp NP_001016429 X. tropicalis
NM_001096505 NM_001096505.1 E3 ubiquitin-protein ligase RNF138 847 bp NP_001089974 X. laevis.S
XM_018267963 XM_018267963.2 E3 ubiquitin-protein ligase RNF138-like 515 bp XP_018123452 X. laevis.L

Models - Gene (33)

Source Version Model Species
NCBI 10.1 XBXL10_1g27896 X. laevis.L
NCBI 10.1 XBXL10_1g29513 X. laevis.S
NCBI 10.0 XBXT10g001667 X. tropicalis
ENSEMBL 10.0 rnf138 X. tropicalis
Xenbase 9.2 gene12604 X. laevis.L
Xenbase 9.2 gene6462 X. laevis.S
JGI 9.1 Xelaev18031969m.g X. laevis.L
JGI 9.1 Xelaev18033686m.g X. laevis.S
Xenbase 9.1 gene6927 X. tropicalis
ENSEMBL 9.1 rnf138 X. tropicalis
JGI 8.0 Xetrov14025862m.g X. tropicalis
JGI 7.2 Xelaev16039590m.g X. laevis.S
JGI 7.1 Xetro.F00520 X. tropicalis
JGI 6.0 XeXenL6RMv10033906m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000004739 X. tropicalis
JGI 4.1 e_gw1.84.74.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_84000014 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_84000015 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_84000002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_840014 X. tropicalis
JGI 4.1 e_gw1.84.126.1 X. tropicalis
JGI 4.1 e_gw1.84.171.1 X. tropicalis
JGI 4.1 gw1.84.126.1 X. tropicalis
JGI 4.1 gw1.84.171.1 X. tropicalis
JGI 4.1 gw1.84.74.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_840008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_840074 X. tropicalis
JGI 4.1 estExt_Genewise1.C_840126 X. tropicalis
JGI 4.1 estExt_Genewise1.C_840171 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_840002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_840015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_840007 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_84000001 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA52373 X. laevis.L
NCBI 10.1 XBmRNA55528 X. laevis.S
ENSEMBL 10.0 ENSXETT00000010263 X. tropicalis
ENSEMBL 10.0 ENSXETT00000113023 X. tropicalis
NCBI 10.0 mRNA008367 X. tropicalis
Xenbase 9.2 rna18905 X. laevis.S
Xenbase 9.2 rna36635 X. laevis.L
ENSEMBL 9.1 ENSXETT00000010263 X. tropicalis
Xenbase 9.1 rna22334 X. tropicalis
JGI 9.1 Xelaev18033686m X. laevis.S
JGI 9.1 Xelaev18031969m X. laevis.L
JGI 8.0 Xetrov14025862m X. tropicalis
JGI 7.2 Xelaev16039590m X. laevis.S
JGI 7.1 Xetro.F00520.1 X. tropicalis
JGI 6.0 XeXenL6RMv10033906m X. laevis.S
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_84000001 X. tropicalis
JGI 4.1 gw1.84.126.1 X. tropicalis
JGI 4.1 gw1.84.171.1 X. tropicalis
JGI 4.1 gw1.84.74.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_84000015 X. tropicalis
JGI 4.1 e_gw1.84.171.1 X. tropicalis
JGI 4.1 e_gw1.84.74.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000010263 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_840002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_840014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_840015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_840007 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_840008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_840074 X. tropicalis
JGI 4.1 estExt_Genewise1.C_840126 X. tropicalis
JGI 4.1 estExt_Genewise1.C_840171 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_84000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_84000014 X. tropicalis
JGI 4.1 e_gw1.84.126.1 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
AL849151 X. tropicalis
IMAGE:7533281 BC167291 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TEgg015c15 CR761053 X. tropicalis
DN087923 X. tropicalis
NM_001016429 X. tropicalis
IMAGE:6323628 BC091711 X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
DQ011285 X. laevis.S
NM_001096505 X. laevis.S
XM_018267963 X. laevis.L

ESTs (17)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas100k03 AL956146 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas077b17 AL774167 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas093b17 AL962194 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7533281 CX434728 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas022p02 AL628876 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas077b17 AL955340 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7533281 CX434727 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:3747278 BF614769 5' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:6322742 CA971368 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6323628 CA972027 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6325437 CA973295 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6325446 CA973298 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6867066 CA982553 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
XL206m18 BJ623988 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL206m18 BJ640574 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3747278 BG018053 3' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3198350 BE508644 3' X. laevis.S Harland ovary ovary frog