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Summary Expression Phenotypes Gene Literature (0) GO Terms (6) Nucleotides (235) Proteins (48) Interactants (64) Wiki
XB-GENEPAGE-1007856

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for exosc1 - All

RefSeq mRNAs(4)
Models - Gene (31)
Models - mRNA (31)
mRNAs (7)
ESTs (123)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
XM_012966191 XM_012966191.3 exosome complex component CSL4 isoform X1 1255 bp XP_012821645 X. tropicalis
NM_001130379 NM_001130379.1 exosome complex component CSL4 1158 bp NP_001123851 X. tropicalis
NM_001093432 NM_001093432.1 exosome component 1 L homeolog 993 bp NP_001086901 X. laevis.L
XM_041568528 XM_041568528.1 XP_041424462.1 exosome component 1 L homeolog isoform X1 980 bp XP_041424462 X. laevis.L

Models - Gene (31)

Source Version Model Species
NCBI 10.0 XBXT10g014858 X. tropicalis
NCBI 10.1 XBXL10_1g30436 X. laevis.L
ENSEMBL 10.0 exosc1 X. tropicalis
JGI 9.1 Xelaev18034687m.g X. laevis.L
Xenbase 9.1 gene6544 X. tropicalis
Xenbase 9.2 gene12394 X. laevis.L
ENSEMBL 9.1 exosc1 X. tropicalis
JGI 8.0 Xetrov14029113m.g X. tropicalis
JGI 7.1 Xetro.G00555 X. tropicalis
JGI 7.2 Xelaev16020643m.g X. laevis.L
JGI 6.0 XeXenL6RMv10027729m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000003434 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5170013 X. tropicalis
JGI 4.1 e_gw1.517.25.1 X. tropicalis
JGI 4.1 e_gw1.517.36.1 X. tropicalis
JGI 4.1 e_gw1.517.57.1 X. tropicalis
JGI 4.1 gw1.517.25.1 X. tropicalis
JGI 4.1 gw1.517.36.1 X. tropicalis
JGI 4.1 gw1.517.57.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5170012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5170025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5170036 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5170057 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5170003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5170014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5170005 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_517000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_517000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_517000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_517000014 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_517000005 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.0 mRNA073496 X. tropicalis
NCBI 10.1 XBmRNA57333 X. laevis.L
ENSEMBL 10.0 ENSXETT00000007435 X. tropicalis
JGI 9.1 Xelaev18034687m X. laevis.L
Xenbase 9.1 rna21129 X. tropicalis
Xenbase 9.2 rna36042 X. laevis.L
ENSEMBL 9.1 ENSXETT00000007435 X. tropicalis
JGI 8.0 Xetrov14029113m X. tropicalis
JGI 7.1 Xetro.G00555.1 X. tropicalis
JGI 7.2 Xelaev16020643m X. laevis.L
JGI 6.0 XeXenL6RMv10027729m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_5170013 X. tropicalis
ENSEMBL 4.1 ENSXETT00000007435 X. tropicalis
JGI 4.1 e_gw1.517.25.1 X. tropicalis
JGI 4.1 e_gw1.517.36.1 X. tropicalis
JGI 4.1 e_gw1.517.57.1 X. tropicalis
JGI 4.1 gw1.517.25.1 X. tropicalis
JGI 4.1 gw1.517.36.1 X. tropicalis
JGI 4.1 gw1.517.57.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5170012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5170025 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5170036 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5170057 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5170003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5170014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5170005 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_517000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_517000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_517000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_517000014 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_517000005 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
TEgg070i09 CR942534 X. tropicalis
IMAGE:7703410 BC167725 X. tropicalis NIH_XGC_tropTe5 testis frog
NM_001130379 X. tropicalis
XM_012966191 X. tropicalis
IMAGE:7020066 BC077633 X. laevis.L
NM_001093432 X. laevis.L
XM_041568528 X. laevis.L

ESTs (123)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu005e07 AL637159 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8920411 EL834608 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9011009 EL855325 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7562996 CX467684 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537799 CX446542 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538405 CX447727 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553674 CX492325 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7579392 CX418465 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7638757 CX383809 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st19e24 DC168360 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7549984 CX485633 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7695924 CX925012 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7703410 CX939731 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTbA038i05 CR444475 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA062g11 CR450134 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA020n14 CR570410 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA006m24 CR576240 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA028h15 CR583103 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA022l12 CR587506 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7587495 CX313517 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA030d05 CR428420 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA065f18 CR432341 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA065n02 CR432401 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA069p07 CR437223 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA080k02 CR442912 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA078l10 BX729130 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas027e09 AL655252 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7092507 CK655741 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TTbA028m13 CR419796 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA060h23 CR424087 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA060g22 CR424323 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu045f09 AL659258 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu042d09 AL661296 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu058m07 AL679654 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu071d05 AL780475 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas084f20 AL783942 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu096f19 AL787173 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu109m19 AL794232 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6982496 CF151173 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:6982496 CF226288 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:9011009 EL855326 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7587495 CX313516 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
rst19e24 DC138270 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst47i15 DC148172 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7579392 CX418464 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537799 CX446541 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7538405 CX447726 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7562996 CX467683 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7549984 CX485632 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7695924 CX925011 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7638757 DR903574 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA080k02 CR442913 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA062g11 CR450135 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA020n14 CR570411 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA050h23 CR580410 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA030d05 CR428421 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA066j06 CR428750 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA065f18 CR432342 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA065n02 CR432402 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA069p07 CR437224 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7092507 CN324879 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TTbA028m14 CR412251 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA028m13 CR419797 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA060h23 CR424088 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA060g22 CR424324 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu058m07 BX684134 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu071d05 BX688048 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu109m19 BX696543 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xl286n18 DC119404 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl318d14 DC128453 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl318c20 DC128439 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl249i15 DC108603 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl258m06 DC111379 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl338j17 DC134502 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl341k02 DC135399 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl273b21 DC115617 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl339j17 DC134796 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl340j17 DC135087 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk131m06ex DC045822 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk102a13ex DC036281 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk136e01ex DC047269 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk142d17ex DC049211 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL469l16ex BP692830 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL498a19ex BP709497 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL442f02ex BP683221 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL519o03ex BP707133 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:6634310 BU908779 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6325576 CA973380 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6870203 CA983009 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6932268 CB941431 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL145j22 BJ094476 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGp998K1414206 BX849547 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL485i07ex BP698690 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3420088 BF024787 5' X. laevis.L Wellcome CRC pSK St 10 5 whole organism NF stage 10.5
IMAGE:3746313 BF427512 5' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3432064 BG348532 5' X. laevis.L Wellcome CRC pcDNAI egg egg unfertilized egg stage
IMAGE:4783232 BM260998 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:2943170 AW460424 5' X. laevis.L Xenla 13LiCl whole organism NF stage 13
PBX0117G05 AW642439 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0145E01 AW644794 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3419808 BE681413 5' X. laevis.L Wellcome CRC pSK St 10 5 whole organism NF stage 10.5
rxl338j17 DC098418 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl318c20 DC099683 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl258m06 DC076668 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl301d24 DC088565 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl340j17 DC098970 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl249i15 DC074085 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk102a13ex DC003403 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk131m06ex DC012655 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk136e01ex DC014043 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxl286n18 DC084662 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL485i07ex BP731718 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL519o03ex BP739461 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL498a19ex BP741357 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxlk142d17ex DC015934 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL219n07 BJ644196 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL469l16ex BP727111 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3432064 BG038537 3' X. laevis.L Wellcome CRC pcDNAI egg egg unfertilized egg stage
IMAGE:3431425 BG038555 3' X. laevis.L Wellcome CRC pcDNAI egg egg unfertilized egg stage
IMAGE:4783321 BI450381 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4783232 BM260916 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:2943170 AW460779 3' X. laevis.L Xenla 13LiCl whole organism NF stage 13