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Summary Expression Phenotypes Gene Literature (12) GO Terms (13) Nucleotides (215) Proteins (89) Interactants (88) Wiki
XB-GENEPAGE-492849

Show:     All X. tropicalis X. laevis

Nucleotide sequences for shf - All

RefSeq mRNAs(24)
Models - Gene (27)
Models - mRNA (34)
mRNAs (26)
ESTs (51)

RefSeq mRNAs (24)

Accession Version Protein Name Length Protein Species
NM_001142104 NM_001142104.1 SH2 domain-containing adapter protein F 4871 bp NP_001135576 X. tropicalis
XM_012970180 XM_012970180.3 SH2 domain-containing adapter protein F isoform X1 5450 bp XP_012825634 X. tropicalis
XM_012970181 XM_012970181.3 SH2 domain-containing adapter protein F isoform X2 5408 bp XP_012825635 X. tropicalis
XM_012970183 XM_012970183.3 SH2 domain-containing adapter protein F isoform X4 1787 bp XP_012825637 X. tropicalis
XM_018091966 XM_018091966.2 SH2 domain-containing adapter protein F isoform X3 5330 bp XP_017947455 X. tropicalis
XM_018255512 XM_018255512.2 SH2 domain-containing adapter protein F isoform X1 5672 bp XP_018111001 X. laevis.S
XM_018255513 XM_018255513.2 SH2 domain-containing adapter protein F isoform X2 5631 bp XP_018111002 X. laevis.S
XM_018255514 XM_018255514.2 SH2 domain-containing adapter protein F isoform X3 5619 bp XP_018111003 X. laevis.S
XM_018255515 XM_018255515.2 SH2 domain-containing adapter protein F isoform X4 5680 bp XP_018111004 X. laevis.S
XM_018255516 XM_018255516.2 SH2 domain-containing adapter protein F isoform X5 5554 bp XP_018111005 X. laevis.S
XM_018255517 XM_018255517.2 SH2 domain-containing adapter protein B isoform X6 5511 bp XP_018111006 X. laevis.S
XM_018255518 XM_018255518.2 SH2 domain-containing adapter protein F isoform X7 5501 bp XP_018111007 X. laevis.S
XM_018255520 XM_018255520.2 SH2 domain-containing adapter protein F isoform X8 5561 bp XP_018111009 X. laevis.S
XM_018255521 XM_018255521.2 SH2 domain-containing adapter protein B isoform X9 5457 bp XP_018111010 X. laevis.S
XM_018255523 XM_018255523.2 SH2 domain-containing adapter protein F isoform X11 1721 bp XP_018111012 X. laevis.S
XM_041588330 XM_041588330.1 XP_041444264.1 SH2 domain-containing adapter protein F isoform X10 2522 bp XP_041444264 X. laevis.S
XM_041588331 XM_041588331.1 XP_041444265.1 SH2 domain-containing adapter protein F isoform X12 4786 bp XP_041444265 X. laevis.S
XM_018252982 XM_018252982.2 SH2 domain-containing adapter protein F isoform X1 5975 bp XP_018108471 X. laevis.L
XM_018252983 XM_018252983.2 SH2 domain-containing adapter protein F isoform X2 5934 bp XP_018108472 X. laevis.L
XM_018252984 XM_018252984.2 SH2 domain-containing adapter protein F isoform X3 2180 bp XP_018108473 X. laevis.L
XM_018252985 XM_018252985.2 SH2 domain-containing adapter protein F isoform X4 5856 bp XP_018108474 X. laevis.L
XM_018252986 XM_018252986.2 SH2 domain-containing adapter protein B isoform X5 5816 bp XP_018108475 X. laevis.L
XM_018252987 XM_018252987.2 SH2 domain-containing adapter protein F isoform X7 1513 bp XP_018108476 X. laevis.L
XM_041586728 XM_041586728.1 XP_041442662.1 SH2 domain-containing adapter protein F isoform X6 1634 bp XP_041442662 X. laevis.L

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g13126 X. laevis.L
NCBI 10.1 XBXL10_1g15794 X. laevis.S
NCBI 10.0 XBXT10g015312 X. tropicalis
ENSEMBL 10.0 shf X. tropicalis
Xenbase 9.2 gene16449 X. laevis.L
Xenbase 9.2 gene7696 X. laevis.S
JGI 9.1 Xelaev18018124m.g X. laevis.L
JGI 9.1 Xelaev18020711m.g X. laevis.S
Xenbase 9.1 gene26577 X. tropicalis
ENSEMBL 9.1 shf X. tropicalis
JGI 7.1 Xetro.I00974 X. tropicalis
JGI 6.0 XeXenL6RMv10018581m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000007756 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_324000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_324000020 X. tropicalis
JGI 4.1 e_gw1.324.1.1 X. tropicalis
JGI 4.1 e_gw1.324.16.1 X. tropicalis
JGI 4.1 e_gw1.324.47.1 X. tropicalis
JGI 4.1 gw1.324.1.1 X. tropicalis
JGI 4.1 gw1.324.16.1 X. tropicalis
JGI 4.1 gw1.324.47.1 X. tropicalis
JGI 4.1 gw1.324.69.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3240047 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3240069 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3240020 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3240007 X. tropicalis
JGI 4.1 e_gw1.324.69.1 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA29525 X. laevis.S
NCBI 10.1 XBmRNA24850 X. laevis.L
NCBI 10.0 mRNA075735 X. tropicalis
ENSEMBL 10.0 ENSXETT00000016922 X. tropicalis
ENSEMBL 10.0 ENSXETT00000074327 X. tropicalis
ENSEMBL 10.0 ENSXETT00000074734 X. tropicalis
Xenbase 9.2 rna48038 X. laevis.L
Xenbase 9.2 rna22469 X. laevis.S
ENSEMBL 9.1 ENSXETT00000074734 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074327 X. tropicalis
Xenbase 9.1 rna52093 X. tropicalis
JGI 9.1 Xelaev18020711m X. laevis.S
JGI 9.1 Xelaev18018124m X. laevis.L
ENSEMBL 9.1 ENSXETT00000016922 X. tropicalis
JGI 7.1 Xetro.I00974.2 X. tropicalis
JGI 7.1 Xetro.I00974.1 X. tropicalis
JGI 7.1 Xetro.I00974.3 X. tropicalis
JGI 6.0 XeXenL6RMv10018581m X. laevis.S
JGI 4.1 fgenesh1_pm.C_scaffold_324000007 X. tropicalis
JGI 4.1 e_gw1.324.16.1 X. tropicalis
JGI 4.1 e_gw1.324.47.1 X. tropicalis
JGI 4.1 e_gw1.324.69.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000016922 X. tropicalis
ENSEMBL 4.1 ENSXETT00000016923 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3240020 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3240007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3240047 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3240069 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_324000020 X. tropicalis
JGI 4.1 e_gw1.324.1.1 X. tropicalis
JGI 4.1 gw1.324.1.1 X. tropicalis
JGI 4.1 gw1.324.16.1 X. tropicalis
JGI 4.1 gw1.324.47.1 X. tropicalis
JGI 4.1 gw1.324.69.1 X. tropicalis

mRNAs from cDNA libraries (26)

Clone Accession Species Library Anatomy Stage
IMAGE:7627467 BC168081 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
NM_001142104 X. tropicalis
XM_012970180 X. tropicalis
XM_012970181 X. tropicalis
XM_012970183 X. tropicalis
XM_018091966 X. tropicalis
XM_018255512 X. laevis.S
XM_018255513 X. laevis.S
XM_018255514 X. laevis.S
XM_018255515 X. laevis.S
XM_018255516 X. laevis.S
XM_018255517 X. laevis.S
XM_018255518 X. laevis.S
XM_018255520 X. laevis.S
XM_018255521 X. laevis.S
XM_018255523 X. laevis.S
XM_041588330 X. laevis.S
XM_041588331 X. laevis.S
XR_005966639 X. laevis.S
XM_018252982 X. laevis.L
XM_018252983 X. laevis.L
XM_018252984 X. laevis.L
XM_018252985 X. laevis.L
XM_018252986 X. laevis.L
XM_018252987 X. laevis.L
XM_041586728 X. laevis.L

ESTs (51)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7625788 CX379134 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st21m06 DC169312 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st70k23 DC184098 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st71k23 DC184357 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7029091 CF782114 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TNeu135o23 AL795378 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas063l08 AL679110 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas064l08 AL679289 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas057g08 AL683003 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas107a16 AL956768 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7528199 CX424730 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553869 CX492024 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553069 CX495520 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557618 CX496442 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA020l06 CR430028 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA019l06 CR430619 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA034l20 BX740149 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7586006 CX319191 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT618 CX359366 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7623454 CX373174 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7609746 CX376470 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:4461689 BG815954 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:7638450 CX384245 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7609093 CX409991 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7627467 DR899978 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7694760 CX923115 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:4461689 BG816526 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
rst21m06 DC139138 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7627467 CX381118 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA020l06 CR430029 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas057g08 BX746080 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas064l08 BX748546 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas107a16 BX754409 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7553869 CX492023 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7694760 CX923114 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7553069 CX495519 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7625788 CX379133 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7557618 CX496441 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA019l06 CR430620 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7609093 CX409990 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA034l20 BX740150 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7609746 DR895249 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7623454 CX373173 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XL095b22 BJ071673 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL141a12 BJ092974 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL096k05 BJ072127 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL162l20 BJ613231 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL162l20 BJ629780 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL095b22 BJ088793 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL096k05 BJ089180 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL141a12 BJ097282 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5