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Summary Expression Phenotypes Gene Literature (26) GO Terms (51) Nucleotides (337) Proteins (61) Interactants (216) Wiki
XB-GENEPAGE-489159

Show:     All X. tropicalis X. laevis

Nucleotide sequences for smn1 - All

RefSeq mRNAs(6)
Models - Gene (34)
Models - mRNA (38)
mRNAs (11)
ESTs (182)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_001100240 NM_001100240.1 survival motor neuron protein 1105 bp NP_001093710 X. tropicalis
XM_018092087 XM_018092087.2 survival motor neuron protein isoform X1 1584 bp XP_017947576 X. tropicalis
NM_001088917 NM_001088917.1 survival of motor neuron 1 L homeolog 1523 bp NP_001082386 X. laevis.L
XM_018239232 XM_018239232.2 survival of motor neuron 1 L homeolog isoform X1 1480 bp XP_018094721 X. laevis.L
XM_018244404 XM_018244404.2 survival motor neuron protein 1 isoform X1 1689 bp XP_018099893 X. laevis.S
XM_018244405 XM_018244405.2 survival motor neuron protein 1 isoform X2 1490 bp XP_018099894 X. laevis.S

Models - Gene (34)

Source Version Model Species
NCBI 10.1 XBXL10_1g5581 X. laevis.S
NCBI 10.1 XBXL10_1g3067 X. laevis.L
NCBI 10.0 XBXT10g005194 X. tropicalis
ENSEMBL 10.0 smn1 X. tropicalis
Xenbase 9.2 gene18263 X. laevis.S
Xenbase 9.2 gene2239 X. laevis.L
JGI 9.1 Xelaev18010864m.g X. laevis.S
JGI 9.1 Xelaev18008131m.g X. laevis.L
Xenbase 9.1 gene429 X. tropicalis
ENSEMBL 9.1 smn1 X. tropicalis
JGI 8.0 Xetrov14000741m.g X. tropicalis
JGI 7.2 Xelaev16004977m.g X. laevis.L
JGI 7.1 Xetro.A01765 X. tropicalis
JGI 6.0 XeXenL6RMv10030678m.g X. laevis.L
JGI 6.0 XeXenL6RMv10010520m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000018189 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_113000007 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_113000009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_113000024 X. tropicalis
JGI 4.1 gw1.113.177.1 X. tropicalis
JGI 4.1 gw1.113.178.1 X. tropicalis
JGI 4.1 gw1.113.179.1 X. tropicalis
JGI 4.1 e_gw1.113.177.1 X. tropicalis
JGI 4.1 e_gw1.113.178.1 X. tropicalis
JGI 4.1 e_gw1.113.179.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1130012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1130175 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1130176 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1130177 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1130007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1130022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1130023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1130008 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_113000023 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.1 XBmRNA5546 X. laevis.L
NCBI 10.1 XBmRNA10461 X. laevis.S
NCBI 10.0 mRNA025756 X. tropicalis
ENSEMBL 10.0 ENSXETT00000039449 X. tropicalis
Xenbase 9.2 rna6503 X. laevis.L
Xenbase 9.2 rna53342 X. laevis.S
ENSEMBL 9.1 ENSXETT00000039449 X. tropicalis
Xenbase 9.1 rna1344 X. tropicalis
JGI 9.1 Xelaev18008131m X. laevis.L
JGI 9.1 Xelaev18010864m X. laevis.S
JGI 8.0 Xetrov14000741m X. tropicalis
JGI 7.2 Xelaev16004977m X. laevis.L
JGI 7.1 Xetro.A01765.1 X. tropicalis
JGI 7.1 Xetro.A01765.4 X. tropicalis
JGI 7.1 Xetro.A01765.3 X. tropicalis
JGI 7.1 Xetro.A01765.2 X. tropicalis
JGI 7.1 Xetro.A01765.5 X. tropicalis
JGI 6.0 XeXenL6RMv10030678m X. laevis.L
JGI 6.0 XeXenL6RMv10010520m X. laevis.L
JGI 4.1 gw1.113.178.1 X. tropicalis
JGI 4.1 e_gw1.113.178.1 X. tropicalis
JGI 4.1 e_gw1.113.179.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000039449 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1130007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1130022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1130023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1130008 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1130012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1130175 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1130176 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1130177 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_113000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_113000023 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_113000024 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_113000009 X. tropicalis
JGI 4.1 gw1.113.177.1 X. tropicalis
JGI 4.1 e_gw1.113.177.1 X. tropicalis
JGI 4.1 gw1.113.179.1 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
IMAGE:7596102 BC135221 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
NM_001100240 X. tropicalis
XM_018092087 X. tropicalis
AY048668 X. laevis.L
IMAGE:5542088 BC045073 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6318077 BC068721 X. laevis.L
NM_001088917 X. laevis.L
XM_018239232 X. laevis.L
IMAGE:7764033 BC106522 X. laevis.S
XM_018244404 X. laevis.S
XM_018244405 X. laevis.S

ESTs (182)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7563619 CX473677 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521439 CX469548 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541164 CX462774 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537512 CX446847 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7574329 CX441265 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575795 CX430347 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576694 CX422214 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8916833 EL829882 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8926005 EL672367 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8910441 EL806411 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7666321 CX851977 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7609944 CX376506 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7623621 CX373033 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620583 CX340934 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620621 CX340878 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7596102 CX336405 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7789411 CX335081 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7789402 CX322783 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA037p08 BX745249 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA034p01 BX744993 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA078e10 BX736039 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA045d06 BX718737 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA068d08 BX716223 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA034o16 BX715907 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8964541 EL659251 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:9014019 EL859816 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
st107e16 DC193758 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st108e16 DC193979 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xthr39A18 CN112796 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7027393 CF784256 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TNeu046l24 AL659087 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu054f16 AL678962 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu093h11 AL779235 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xthr30O20 CN107599 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8919705 EL833687 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:6996129 CF238509 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
THdA044n24 CR587838 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA005p10 CR566739 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA016m23 CR561619 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA060n16 CR426946 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas047a24 AL646110 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas051g03 AL673767 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas071k20 AL773831 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas071o12 AL773850 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas124a21 AL957091 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas111a12 AL959845 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7567863 CX508809 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567031 CX507700 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7558131 CX496692 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553563 CX491889 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544855 CX486915 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8926005 EL672366 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8910441 EL806412 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
rst107e16 DC163090 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst108e16 DC163333 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7027393 CF784255 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TNeu054f16 BX685134 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu093h11 BX695732 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7576694 CX422213 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575795 CX430346 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537512 CX446846 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7521439 CX469547 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563619 CX473676 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7544855 CX486914 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553563 CX491888 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7558131 CX496691 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567031 CX507699 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567863 CX508808 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA071l14 CR426869 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA071n12 CR426885 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA016m23 CR561620 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA044n24 CR587839 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA068d08 BX716224 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA045d06 BX718738 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA078e10 BX736040 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7789402 CX322782 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7789411 CX335080 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7596102 CX336404 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620583 CX340933 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7609944 DR895262 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620621 DR898174 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7666321 CX851976 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8916833 EL829883 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8919705 EL833688 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
xthr39A18 CN112795 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:9014019 EL859817 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:6327274 CA974616 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
XL073p04 BJ061753 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6325238 CA973161 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
XL068a23 BJ062457 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6325200 CA973136 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6323365 CA971828 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
XL105p16 BJ068178 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6323253 CA971753 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:3377793 BE190066 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:3377569 BE189915 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
XL414i14ex BP673690 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL418b24ex BP674904 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xl230g04 DC102784 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15