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Summary Expression Phenotypes Gene Literature (2) GO Terms (10) Nucleotides (159) Proteins (66) Interactants (12) Wiki
XB-GENEPAGE-6451484

Show:     All X. tropicalis X. laevis

Nucleotide sequences for col4a1 - All

RefSeq mRNAs(3)
Models - Gene (41)
Models - mRNA (54)
mRNAs (6)
ESTs (34)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
XM_002933018 XM_002933018.5 collagen alpha-1(IV) chain 5912 bp XP_002933064 X. tropicalis
XM_018247205 XM_018247205.2 collagen alpha-1(IV) chain 7000 bp XP_018102694 X. laevis.L
XM_041584255 XM_041584255.1 XP_041440189.1 collagen alpha-1(IV) chain-like 6889 bp XP_041440189 X. laevis.S

Models - Gene (41)

Source Version Model Species
NCBI 10.1 XBXL10_1g10501 X. laevis.S
NCBI 10.1 XBXL10_1g7820 X. laevis.L
NCBI 10.0 XBXT10g012849 X. tropicalis
ENSEMBL 10.0 col4a1 X. tropicalis
Xenbase 9.2 gene50985 X. laevis.L
JGI 9.1 Xelaev18015611m.g X. laevis.S
JGI 9.1 Xelaev18013071m.g X. laevis.L
Xenbase 9.1 gene31430 X. tropicalis
ENSEMBL 9.1 col4a1 X. tropicalis
JGI 7.2 Xelaev16054976m.g X. laevis.L
JGI 7.1 Xetro.B01654 X. tropicalis
JGI 6.0 XeXenL6RMv10040561m.g X. laevis.L
JGI 4.1 gw1.42.177.1 X. tropicalis
JGI 4.1 gw1.42.75.1 X. tropicalis
JGI 4.1 gw1.42.150.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_420021 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_420022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_420047 X. tropicalis
JGI 4.1 estExt_Genewise1.C_420074 X. tropicalis
JGI 4.1 estExt_Genewise1.C_420130 X. tropicalis
JGI 4.1 estExt_Genewise1.C_420148 X. tropicalis
JGI 4.1 estExt_Genewise1.C_420149 X. tropicalis
JGI 4.1 estExt_Genewise1.C_420150 X. tropicalis
JGI 4.1 estExt_Genewise1.C_420156 X. tropicalis
ENSEMBL 4.1 ENSXETG00000002637 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_420035 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_420036 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_420016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_42000036 X. tropicalis
JGI 4.1 estExt_Genewise1.C_420174 X. tropicalis
JGI 4.1 gw1.42.159.1 X. tropicalis
JGI 4.1 e_gw1.42.152.1 X. tropicalis
JGI 4.1 e_gw1.42.132.1 X. tropicalis
JGI 4.1 e_gw1.42.150.1 X. tropicalis
JGI 4.1 e_gw1.42.153.1 X. tropicalis
JGI 4.1 e_gw1.42.159.1 X. tropicalis
JGI 4.1 e_gw1.42.177.1 X. tropicalis
JGI 4.1 e_gw1.42.75.1 X. tropicalis
JGI 4.1 gw1.42.132.1 X. tropicalis
JGI 4.1 gw1.42.152.1 X. tropicalis
JGI 4.1 gw1.42.153.1 X. tropicalis

mRNAs based on gene models(54)

Source Version Model Species
NCBI 10.1 XBmRNA14737 X. laevis.L
NCBI 10.1 XBmRNA19659 X. laevis.S
NCBI 10.0 mRNA063594 X. tropicalis
ENSEMBL 10.0 ENSXETT00000005670 X. tropicalis
ENSEMBL 10.0 ENSXETT00000084866 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082616 X. tropicalis
Xenbase 9.2 rna97708 X. laevis.L
JGI 9.1 Xelaev18015611m X. laevis.S
JGI 9.1 Xelaev18013071m X. laevis.L
ENSEMBL 9.1 ENSXETT00000005670 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082616 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084866 X. tropicalis
Xenbase 9.1 rna59762 X. tropicalis
JGI 7.2 Xelaev16054976m X. laevis.L
JGI 7.1 Xetro.B01654.1 X. tropicalis
JGI 6.0 XeXenL6RMv10040561m X. laevis.L
ENSEMBL 4.1 ENSXETT00000005677 X. tropicalis
ENSEMBL 4.1 ENSXETT00000005679 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_420035 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_420036 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_420016 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_420021 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_420022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_420047 X. tropicalis
JGI 4.1 estExt_Genewise1.C_420074 X. tropicalis
JGI 4.1 estExt_Genewise1.C_420130 X. tropicalis
JGI 4.1 estExt_Genewise1.C_420148 X. tropicalis
JGI 4.1 estExt_Genewise1.C_420149 X. tropicalis
JGI 4.1 estExt_Genewise1.C_420150 X. tropicalis
JGI 4.1 estExt_Genewise1.C_420156 X. tropicalis
JGI 4.1 estExt_Genewise1.C_420174 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_42000036 X. tropicalis
JGI 4.1 gw1.42.132.1 X. tropicalis
JGI 4.1 gw1.42.150.1 X. tropicalis
JGI 4.1 gw1.42.152.1 X. tropicalis
JGI 4.1 gw1.42.153.1 X. tropicalis
JGI 4.1 gw1.42.159.1 X. tropicalis
JGI 4.1 gw1.42.75.1 X. tropicalis
JGI 4.1 gw1.42.177.1 X. tropicalis
JGI 4.1 e_gw1.42.132.1 X. tropicalis
JGI 4.1 e_gw1.42.150.1 X. tropicalis
JGI 4.1 e_gw1.42.152.1 X. tropicalis
JGI 4.1 e_gw1.42.153.1 X. tropicalis
JGI 4.1 e_gw1.42.159.1 X. tropicalis
JGI 4.1 e_gw1.42.177.1 X. tropicalis
JGI 4.1 e_gw1.42.75.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000005662 X. tropicalis
ENSEMBL 4.1 ENSXETT00000005663 X. tropicalis
ENSEMBL 4.1 ENSXETT00000005668 X. tropicalis
ENSEMBL 4.1 ENSXETT00000005670 X. tropicalis
ENSEMBL 4.1 ENSXETT00000005671 X. tropicalis
ENSEMBL 4.1 ENSXETT00000005673 X. tropicalis
JGI 4.1 ENSXETT00000005675 X. tropicalis
ENSEMBL 4.1 ENSXETT00000005676 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:7605993 BC135599 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7664350 BC155971 X. tropicalis NIH_XGC_tropBrn4 brain frog
XM_002933018 X. tropicalis
IM1-E3-147 AF170340 X. laevis.L
XM_018247205 X. laevis.L
XM_041584255 X. laevis.S

ESTs (34)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7605912 CX366183 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7647589 CX805663 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7607705 CX368454 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7664350 CX848938 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7626694 CX380517 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7690542 CX914960 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7586309 CX319569 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7693118 CX920180 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7802468 DR836863 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7611672 CX404090 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7845614 DT528432 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8928080 EL676445 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8865510 EL703405 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8876119 EL767210 5' X. tropicalis NICHD_XGC_tropPanc1 pancreas frog
IMAGE:8857214 EL820713 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7605993 CX413235 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7786072 CX327692 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8864499 EL701175 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8857214 EL820714 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8865510 EL703404 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7586309 CX319568 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7786072 CX327691 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7605912 CX366182 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7611672 CX404089 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7605993 CX413234 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7607705 DR894533 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7626694 DR899886 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7647589 CX805662 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7664350 CX848937 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7690542 CX914959 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693118 CX920179 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7845614 DT528431 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8876119 EL767209 3' X. tropicalis NICHD_XGC_tropPanc1 pancreas frog
IMAGE:8864499 EL701174 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66