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Summary Expression Phenotypes Gene Literature (2) GO Terms (2) Nucleotides (227) Proteins (48) Interactants (50) Wiki
XB-GENEPAGE-947202

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for capn5 - All

RefSeq mRNAs(4)
Models - Gene (25)
Models - mRNA (30)
mRNAs (9)
ESTs (121)

RefSeq mRNAs (4)

Accession Version name Length Protein Species
NM_001006735 calpain-5 3368 bp NP_001006736 X. tropicalis
XM_041583067 XP_041439001.1 uncharacterized protein LOC414629 isoform X1 4163 bp XP_041439001 X. laevis.S
NM_001087339 calpain 5 L homeolog 4128 bp NP_001080808 X. laevis.L
NM_001091200 uncharacterized protein LOC414629 4058 bp NP_001084669 X. laevis.S

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g010869 X. tropicalis
NCBI 10.1 XBXL10_1g8771 X. laevis.L
NCBI 10.1 XBXL10_1g11169 X. laevis.S
ENSEMBL 10.0 capn5 X. tropicalis
JGI 9.1 Xelaev18014088m.g X. laevis.L
JGI 9.1 Xelaev18016388m.g X. laevis.S
Xenbase 9.1 gene22928 X. tropicalis
Xenbase 9.2 gene13658 X. laevis.L
Xenbase 9.2 gene6648 X. laevis.S
ENSEMBL 9.1 icmt X. tropicalis
ENSEMBL 9.1 icmt X. tropicalis
JGI 8.0 Xetrov14011103m.g X. tropicalis
JGI 7.1 Xetro.B02285 X. tropicalis
JGI 7.2 Xelaev16068655m.g X. laevis.L
JGI 6.0 XeXenL6RMv10005746m.g X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_609000001 X. tropicalis
JGI 4.1 e_gw1.609.123.1 X. tropicalis
JGI 4.1 e_gw1.609.124.1 X. tropicalis
JGI 4.1 e_gw1.609.125.1 X. tropicalis
JGI 4.1 gw1.609.123.1 X. tropicalis
JGI 4.1 gw1.609.124.1 X. tropicalis
JGI 4.1 gw1.609.125.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_609000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_609000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_609000002 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.0 mRNA053847 X. tropicalis
NCBI 10.1 XBmRNA16451 X. laevis.L
NCBI 10.1 XBmRNA20985 X. laevis.S
ENSEMBL 10.0 ENSXETT00000017750 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067165 X. tropicalis
JGI 9.1 Xelaev18014088m X. laevis.L
JGI 9.1 Xelaev18016388m X. laevis.S
Xenbase 9.2 rna39749 X. laevis.L
Xenbase 9.2 rna19461 X. laevis.S
Xenbase 9.1 rna46199 X. tropicalis
ENSEMBL 9.1 ENSXETT00000006391 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067165 X. tropicalis
ENSEMBL 9.1 ENSXETT00000017750 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068035 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069490 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072827 X. tropicalis
JGI 8.0 Xetrov14011103m X. tropicalis
JGI 7.1 Xetro.B02285.1 X. tropicalis
JGI 7.2 Xelaev16068655m X. laevis.L
JGI 6.0 XeXenL6RMv10005746m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_609000001 X. tropicalis
JGI 4.1 e_gw1.609.123.1 X. tropicalis
JGI 4.1 e_gw1.609.124.1 X. tropicalis
JGI 4.1 e_gw1.609.125.1 X. tropicalis
JGI 4.1 gw1.609.123.1 X. tropicalis
JGI 4.1 gw1.609.124.1 X. tropicalis
JGI 4.1 gw1.609.125.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_609000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_609000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_609000002 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
NM_001006735 X. tropicalis
IMAGE:6988034 BC075496 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas136p06 CT010533 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XM_031895855 X. tropicalis
IMAGE:6633453 BC068792 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5571989 BC048218 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001091200 X. laevis.S
NM_001087339 X. laevis.L
XM_041583067 X. laevis.S

ESTs (121)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8891214 EL851831 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8924530 EL669857 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8867379 EL705807 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8959519 EL663097 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8959495 EL660723 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8956435 EL657253 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
st93d06 DC189676 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st84n07 DC187682 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7625837 CX378878 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7618906 CX346497 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7578022 CX424412 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577410 CX423508 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7531006 CX420769 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575354 CX429953 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7574363 CX441175 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568863 CX456657 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561110 CX464289 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555517 CX502640 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568027 CX508953 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567713 CX508117 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567130 CX508051 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559666 CX514788 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559238 CX514154 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7517062 CX748395 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7515439 CX745595 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7512751 CX741193 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7572915 CX435966 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7528942 CX425707 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7584548 CX415619 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA053f24 CR582715 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA080m17 CR441312 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA041g24 CR437773 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr03L08 CN120203 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7094844 CK656337 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TGas136p06 AL972780 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas120b06 AL967170 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas071e15 AL773631 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas007k23 AL633277 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA048e09 BX730512 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas042g01 AL654737 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas009h14 AL628448 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu125e22 AL788890 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu068n15 AL783116 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076d12 AL781960 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas051j21 AL675822 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu034k07 AL656107 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu029j12 AL650694 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu012d04 AL641557 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu012o15 AL639587 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6986304 CF222035 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6986345 CF221970 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6988034 CF220652 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TNeu144a05 AL798169 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8891214 EL851832 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8924530 EL669856 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
rst110e14 DC163804 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst85h20 DC157704 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst37f12 DC145657 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst8j07 DC145156 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst7c10 DC144724 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst49l10 DC148707 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst8c10 DC145020 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst11c02 DC135851 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7618906 DR897833 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7577410 DR889941 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575354 DR889856 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568863 DR889621 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7517062 CX748394 3' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:7515439 CX745594 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7512751 CX741192 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7559666 CX514787 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559238 CX514153 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568027 CX508952 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567713 CX508116 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567130 CX508050 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555517 CX502639 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561110 CX464288 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7574363 CX441174 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7572915 CX435965 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7578022 CX424411 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7531006 CX420768 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7584548 CX415618 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7625837 CX378877 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA053f24 CR582716 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA080m17 CR441313 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA041g24 CR437774 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas136p06 BX759868 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas094c19 BX752250 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas071e15 BX751103 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA046o02 BX745499 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu125e22 BX702186 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu051i21 BX700039 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076d12 BX685643 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xlk131m08ex DC045824 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8540999 EB471122 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
XL174j03 BJ615802 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL164m07 BJ613674 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL087n12 BJ075224 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL090n11 BJ074603 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL065c17 BJ060225 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL082l02 BJ065346 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL020i01 BJ033349 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL019i01 BJ033017 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL030j12 BJ034709 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4970143 CF289955 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6862645 CA986384 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6867813 CA981370 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:5571989 BQ737394 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3300811 BE131840 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0111D09 AW641876 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0087G07 AW639830 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxlk131m08ex DC012657 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL174j03 BJ632417 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL164m07 BJ630292 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL087n12 BJ092605 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL090n11 BJ092038 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL082l02 BJ082755 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL065c17 BJ078448 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL020i01 BJ048644 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL019i01 BJ048322 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15