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Summary Expression Phenotypes Gene Literature (37) GO Terms (116) Nucleotides (241) Proteins (71) Interactants (563) Wiki
XB-GENEPAGE-480835

Show:     All X. tropicalis X. laevis

Nucleotide sequences for rara - All

RefSeq mRNAs(10)
Models - Gene (25)
Models - mRNA (40)
mRNAs (17)
ESTs (125)

RefSeq mRNAs (10)

Accession Version Protein Name Length Protein Species
NM_001171194 NM_001171194.1 retinoic acid receptor alpha 2423 bp NP_001164665 X. tropicalis
XM_031893936 XM_031893936.1 XP_031749796.1 retinoic acid receptor alpha isoform X1 3592 bp XP_031749796 X. tropicalis
XM_031893937 XM_031893937.1 XP_031749797.1 retinoic acid receptor alpha isoform X2 3581 bp XP_031749797 X. tropicalis
NM_001090254 NM_001090254.1 retinoic acid receptor alpha L homeolog 2837 bp NP_001083723 X. laevis.L
XM_018237960 XM_018237960.2 retinoic acid receptor alpha isoform X1 3799 bp XP_018093449 X. laevis.S
XM_018237961 XM_018237961.2 retinoic acid receptor alpha isoform X2 3603 bp XP_018093450 X. laevis.S
XM_018237962 XM_018237962.2 retinoic acid receptor alpha isoform X2 3521 bp XP_018093451 X. laevis.S
XM_018237963 XM_018237963.2 retinoic acid receptor alpha isoform X2 3391 bp XP_018093452 X. laevis.S
XM_018237964 XM_018237964.2 retinoic acid receptor alpha isoform X3 2985 bp XP_018093453 X. laevis.S
XM_041579111 XM_041579111.1 XP_041435045.1 retinoic acid receptor alpha isoform X3 3113 bp XP_041435045 X. laevis.S

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g38969 X. laevis.L
NCBI 10.1 XBXL10_1g42214 X. laevis.S
NCBI 10.0 XBXT10g010758 X. tropicalis
ENSEMBL 10.0 rara X. tropicalis
Xenbase 9.2 gene20533 X. laevis.S
Xenbase 9.2 gene38230 X. laevis.L
JGI 9.1 Xelaev18045904m.g X. laevis.S
JGI 9.1 Xelaev18043141m.g X. laevis.L
Xenbase 9.1 gene27969 X. tropicalis
ENSEMBL 9.1 rara X. tropicalis
JGI 8.0 Xetrov14047843m.g X. tropicalis
JGI 7.1 Xetro.J00830 X. tropicalis
JGI 6.0 XeXenL6RMv10004842m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000024390 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_582000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_582000006 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_582000001 X. tropicalis
JGI 4.1 gw1.582.41.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_582000001 X. tropicalis
JGI 4.1 gw1.582.36.1 X. tropicalis
JGI 4.1 gw1.582.35.1 X. tropicalis
JGI 4.1 e_gw1.582.41.1 X. tropicalis
JGI 4.1 e_gw1.582.36.1 X. tropicalis
JGI 4.1 e_gw1.582.35.1 X. tropicalis
JGI 4.1 C_scaffold_582000002 X. tropicalis

mRNAs based on gene models(40)

Source Version Model Species
NCBI 10.1 XBmRNA73539 X. laevis.L
NCBI 10.1 XBmRNA79352 X. laevis.S
ENSEMBL 10.0 ENSXETT00000117052 X. tropicalis
ENSEMBL 10.0 ENSXETT00000124430 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067227 X. tropicalis
ENSEMBL 10.0 ENSXETT00000108855 X. tropicalis
NCBI 10.0 mRNA053280 X. tropicalis
ENSEMBL 10.0 ENSXETT00000112299 X. tropicalis
ENSEMBL 10.0 ENSXETT00000116302 X. tropicalis
ENSEMBL 10.0 ENSXETT00000110151 X. tropicalis
ENSEMBL 10.0 ENSXETT00000115347 X. tropicalis
ENSEMBL 10.0 ENSXETT00000072605 X. tropicalis
Xenbase 9.2 rna59945 X. laevis.S
Xenbase 9.2 rna79307 X. laevis.L
ENSEMBL 9.1 ENSXETT00000067227 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072605 X. tropicalis
JGI 9.1 Xelaev18043141m X. laevis.L
Xenbase 9.1 rna54296 X. tropicalis
JGI 9.1 Xelaev18045904m X. laevis.S
ENSEMBL 9.1 ENSXETT00000052736 X. tropicalis
ENSEMBL 9.1 ENSXETT00000064228 X. tropicalis
JGI 8.0 Xetrov14047843m X. tropicalis
JGI 7.1 Xetro.J00830.1 X. tropicalis
JGI 7.1 Xetro.J00830.3 X. tropicalis
JGI 7.1 Xetro.J00830.4 X. tropicalis
JGI 7.1 Xetro.J00830.5 X. tropicalis
JGI 7.1 Xetro.J00830.2 X. tropicalis
JGI 6.0 XeXenL6RMv10004842m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_582000007 X. tropicalis
JGI 4.1 e_gw1.582.35.1 X. tropicalis
JGI 4.1 e_gw1.582.36.1 X. tropicalis
JGI 4.1 e_gw1.582.41.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000052736 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_582000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_582000006 X. tropicalis
JGI 4.1 C_scaffold_582000002 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_582000001 X. tropicalis
JGI 4.1 gw1.582.35.1 X. tropicalis
JGI 4.1 gw1.582.36.1 X. tropicalis
JGI 4.1 gw1.582.41.1 X. tropicalis

mRNAs from cDNA libraries (17)

Clone Accession Species Library Anatomy Stage
TGas022f07 CT025407 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001171194 X. tropicalis
XM_031893936 X. tropicalis
XM_031893937 X. tropicalis
IMAGE:3400327 BC072131 X. laevis.L NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
IMAGE:7974313 BC167563 X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:9041589 BC169954 X. laevis.L
IMAGE:9041593 BC169958 X. laevis.L
NM_001090254 X. laevis.L
X87365 X. laevis.L
L11445 X. laevis.S
XM_018237960 X. laevis.S
XM_018237961 X. laevis.S
XM_018237962 X. laevis.S
XM_018237963 X. laevis.S
XM_018237964 X. laevis.S
XM_041579111 X. laevis.S

ESTs (125)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu069e07 BX683078 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7513617 CX743099 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7513119 CX742063 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
xthr01H01 CN095089 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7514334 CX744008 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:8953165 EG653014 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7737359 DN024504 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7605646 CX412912 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7629667 CX369406 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7629522 CX369107 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7592166 CX325933 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT13401 CX321717 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas003l07 AL595869 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas022f07 AL633202 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas032f21 AL648503 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA030o06 BX743568 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA001n19 CR589398 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr01H01 CN102321 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7530970 CX420846 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st11i04 DC166035 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7537027 CX445227 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA012c03 CR566159 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA007b21 CR560092 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
st14k17 DC166992 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st15l21 DC167311 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st16i03 DC167539 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st16l21 DC167611 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st18d16 DC168047 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st23f02 DC169766 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st28c09 DC171127 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st29a21 DC171392 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st2p08 DC171953 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st30a21 DC171981 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st35n06 DC173536 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st7j11 DC175180 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st38p19 DC176435 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st39p19 DC176695 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st41d24 DC177016 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st43j16 DC177540 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st49p23 DC179041 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st55c13 DC180256 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st56o09 DC180671 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st57n11 DC180879 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st62n12 DC182126 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st67k11 DC183352 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st67n05 DC183397 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st68k11 DC183604 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st71p16 DC184437 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st75a17 DC185224 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st76p19 DC185740 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st80f11 DC186578 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st83g22 DC187328 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st116p21 DC193699 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu038c14 AL657969 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu069e07 AL780751 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu084h09 AL780960 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu096a18 AL786626 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu103k24 AL790959 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu120i08 AL796960 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu122c20 AL792280 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
rst39p19 DC146400 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7513119 CX742062 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7513617 CX743098 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7514334 CX744007 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
rst11i04 DC135965 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst18d16 DC137951 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst19j15 DC138351 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst20h15 DC138758 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst23f02 DC139605 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst2p08 DC141647 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst35n06 DC143294 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst41d24 DC146717 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst43j16 DC147259 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst55c13 DC149973 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst57n11 DC150614 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst60f20 DC151236 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst62n12 DC151866 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst115g09 DC164628 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu103k24 BX690595 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu084h09 BX696079 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu120i08 BX699943 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu122c20 BX702322 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7530970 CX420845 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537027 CX445226 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA001n19 CR589399 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7592166 CX325932 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7629522 CX369106 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7629667 CX369405 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7605646 DR893998 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7737359 DN024503 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
xthr01H01 CN095088 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr01H01 CN102320 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
PBX0122H12 AW642909 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4203754 BG553461 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5513958 CF286593 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:7974313 DR727068 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL074j14 BJ061967 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:7981758 DR725916 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL074n01 BJ062039 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25