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XB-GENEPAGE-862913
Nucleotide sequences for ctcf - All
RefSeq mRNAs(6) |
Models - Gene (29) |
Models - mRNA (35) |
mRNAs (10) |
ESTs (266) |
RefSeq mRNAs (6)
Accession | Version | Protein Name | Length | Protein | Species |
NM_001122796
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NM_001122796.1 | transcriptional repressor CTCF | 2801 bp | NP_001116268 | X. tropicalis |
NM_001086461
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NM_001086461.1 | CCCTC-binding factor L homeolog | 3842 bp | NP_001079930 | X. laevis.L |
XM_018260403
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XM_018260403.2 | transcriptional repressor CTCF isoform X1 | 2864 bp | XP_018115892 | X. laevis.S |
XM_018260404
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XM_018260404.2 | transcriptional repressor CTCF isoform X2 | 2892 bp | XP_018115893 | X. laevis.S |
XM_018260405
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XM_018260405.1 | transcriptional repressor CTCF isoform X3 | 3003 bp | XP_018115894 | X. laevis.S |
XM_041561080
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XM_041561080.1 | XP_041417014.1 transcriptional repressor CTCF isoform X3 | 2475 bp | XP_041417014 | X. laevis.S |
Models - Gene (29)
Source | Version | Model | Species |
NCBI | 10.1 |
XBXL10_1g18479
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X. laevis.L |
NCBI | 10.1 |
XBXL10_1g21107
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X. laevis.S |
NCBI | 10.0 |
XBXT10g011095
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X. tropicalis |
ENSEMBL | 10.0 |
ctcf
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X. tropicalis |
Xenbase | 9.2 |
gene3157
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X. laevis.S |
Xenbase | 9.2 |
gene20356
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X. laevis.L |
JGI | 9.1 |
Xelaev18024679m.g
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X. laevis.S |
JGI | 9.1 |
Xelaev18022367m.g
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X. laevis.L |
Xenbase | 9.1 |
gene1344
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X. tropicalis |
ENSEMBL | 9.1 |
ctcf
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X. tropicalis |
JGI | 8.0 |
Xetrov14018182m.g
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X. tropicalis |
JGI | 7.2 |
Xelaev16041263m.g
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X. laevis.L |
JGI | 7.1 |
Xetro.D00537
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X. tropicalis |
JGI | 6.0 |
XeXenL6RMv10007425m.g
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X. laevis.L |
JGI | 6.0 |
XeXenL6RMv10035071m.g
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X. laevis.L |
ENSEMBL | 4.1 |
ENSXETG00000015615
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pg.C_scaffold_146000042
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X. tropicalis |
JGI | 4.1 |
fgenesh1_kg.C_scaffold_146000007
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X. tropicalis |
JGI | 4.1 |
fgenesh1_Sanger_cdna.C_scaffold_146000007
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X. tropicalis |
JGI | 4.1 |
estExt_fgenesh1_pg.C_1460042
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pg.C_scaffold_146000043
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X. tropicalis |
JGI | 4.1 |
e_gw1.146.5.1
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X. tropicalis |
JGI | 4.1 |
estExt_fgenesh1_kg.C_1460007
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X. tropicalis |
JGI | 4.1 |
e_gw1.146.129.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.146.127.1
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X. tropicalis |
JGI | 4.1 |
gw1.146.5.1
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X. tropicalis |
JGI | 4.1 |
gw1.146.129.1
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X. tropicalis |
JGI | 4.1 |
gw1.146.127.1
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pm.C_scaffold_146000013
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X. tropicalis |
mRNAs based on gene models(35)
Source | Version | Model | Species |
NCBI | 10.1 |
XBmRNA33973
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X. laevis.L |
NCBI | 10.1 |
XBmRNA39097
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X. laevis.S |
NCBI | 10.0 |
mRNA055069
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X. tropicalis |
ENSEMBL | 10.0 |
ENSXETT00000034066
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X. tropicalis |
ENSEMBL | 10.0 |
ENSXETT00000060905
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X. tropicalis |
Xenbase | 9.2 |
rna9146
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X. laevis.S |
Xenbase | 9.2 |
rna59454
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X. laevis.L |
JGI | 9.1 |
Xelaev18024679m
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X. laevis.S |
JGI | 9.1 |
Xelaev18022367m
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X. laevis.L |
Xenbase | 9.1 |
rna4304
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X. tropicalis |
ENSEMBL | 9.1 |
ENSXETT00000060905
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X. tropicalis |
ENSEMBL | 9.1 |
ENSXETT00000068097
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X. tropicalis |
ENSEMBL | 9.1 |
ENSXETT00000070249
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X. tropicalis |
ENSEMBL | 9.1 |
ENSXETT00000072224
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X. tropicalis |
ENSEMBL | 9.1 |
ENSXETT00000034066
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X. tropicalis |
JGI | 8.0 |
Xetrov14018182m
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X. tropicalis |
JGI | 7.2 |
Xelaev16041263m
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X. laevis.L |
JGI | 7.1 |
Xetro.D00537.2
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X. tropicalis |
JGI | 7.1 |
Xetro.D00537.1
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X. tropicalis |
JGI | 6.0 |
XeXenL6RMv10007425m
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X. laevis.L |
JGI | 6.0 |
XeXenL6RMv10035071m
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X. laevis.L |
JGI | 4.1 |
fgenesh1_Sanger_cdna.C_scaffold_146000007
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X. tropicalis |
JGI | 4.1 |
e_gw1.146.129.1
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X. tropicalis |
JGI | 4.1 |
e_gw1.146.5.1
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X. tropicalis |
ENSEMBL | 4.1 |
ENSXETT00000034066
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X. tropicalis |
JGI | 4.1 |
estExt_fgenesh1_kg.C_1460007
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X. tropicalis |
JGI | 4.1 |
estExt_fgenesh1_pg.C_1460042
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X. tropicalis |
JGI | 4.1 |
fgenesh1_kg.C_scaffold_146000007
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pg.C_scaffold_146000042
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pg.C_scaffold_146000043
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X. tropicalis |
JGI | 4.1 |
fgenesh1_pm.C_scaffold_146000013
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X. tropicalis |
JGI | 4.1 |
e_gw1.146.127.1
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X. tropicalis |
JGI | 4.1 |
gw1.146.127.1
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X. tropicalis |
JGI | 4.1 |
gw1.146.129.1
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X. tropicalis |
JGI | 4.1 |
gw1.146.5.1
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X. tropicalis |
mRNAs from cDNA libraries (10)
Clone | Accession | Species | Library | Anatomy | Stage |
IMAGE:7690853 |
BC161099
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X. tropicalis | NIH_XGC_tropTe4 | testis | frog |
TTpA029a01 |
CU075811
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X. tropicalis | XGC-tadpole | whole organism | NF stage 35 and 36 to NF stage 40 |
NM_001122796
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X. tropicalis | ||||
AF305695
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X. laevis.L | ||||
IMAGE:6864354 |
BC057697
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X. laevis.L | NICHD_XGC_Emb1 | whole organism | NF stage 10 |
NM_001086461
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X. laevis.L | ||||
XM_018260403
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X. laevis.S | ||||
XM_018260404
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X. laevis.S | ||||
XM_018260405
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X. laevis.S | ||||
XM_041561080
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X. laevis.S |