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XB-GENEPAGE-862913
Nucleotide sequences for ctcf - All
RefSeq mRNAs(6) |
Models - Gene (29) |
Models - mRNA (35) |
mRNAs (10) |
ESTs (266) |
RefSeq mRNAs (6)
Accession | Version | Protein Name | Length | Protein | Species |
NM_001122796 | NM_001122796.1 | transcriptional repressor CTCF | 2801 bp | NP_001116268 | X. tropicalis |
NM_001086461 | NM_001086461.1 | CCCTC-binding factor L homeolog | 3842 bp | NP_001079930 | X. laevis.L |
XM_041561080 | XM_041561080.1 | XP_041417014.1 transcriptional repressor CTCF isoform X3 | 2475 bp | XP_041417014 | X. laevis.S |
XM_018260403 | XM_018260403.2 | transcriptional repressor CTCF isoform X1 | 2864 bp | XP_018115892 | X. laevis.S |
XM_018260404 | XM_018260404.2 | transcriptional repressor CTCF isoform X2 | 2892 bp | XP_018115893 | X. laevis.S |
XM_018260405 | XM_018260405.1 | transcriptional repressor CTCF isoform X3 | 3003 bp | XP_018115894 | X. laevis.S |
Models - Gene (29)
Source | Version | Model | Species |
NCBI | 10.0 | XBXT10g011095 | X. tropicalis |
NCBI | 10.1 | XBXL10_1g18479 | X. laevis.L |
NCBI | 10.1 | XBXL10_1g21107 | X. laevis.S |
ENSEMBL | 10.0 | ctcf | X. tropicalis |
JGI | 9.1 | Xelaev18022367m.g | X. laevis.L |
JGI | 9.1 | Xelaev18024679m.g | X. laevis.S |
Xenbase | 9.1 | gene1344 | X. tropicalis |
Xenbase | 9.2 | gene20356 | X. laevis.L |
Xenbase | 9.2 | gene3157 | X. laevis.S |
ENSEMBL | 9.1 | ctcf | X. tropicalis |
JGI | 8.0 | Xetrov14018182m.g | X. tropicalis |
JGI | 7.1 | Xetro.D00537 | X. tropicalis |
JGI | 7.2 | Xelaev16041263m.g | X. laevis.L |
JGI | 6.0 | XeXenL6RMv10007425m.g | X. laevis.L |
JGI | 6.0 | XeXenL6RMv10035071m.g | X. laevis.L |
ENSEMBL | 4.1 | ENSXETG00000015615 | X. tropicalis |
JGI | 4.1 | e_gw1.146.5.1 | X. tropicalis |
JGI | 4.1 | gw1.146.127.1 | X. tropicalis |
JGI | 4.1 | gw1.146.129.1 | X. tropicalis |
JGI | 4.1 | gw1.146.5.1 | X. tropicalis |
JGI | 4.1 | e_gw1.146.127.1 | X. tropicalis |
JGI | 4.1 | e_gw1.146.129.1 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_kg.C_1460007 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_1460042 | X. tropicalis |
JGI | 4.1 | fgenesh1_Sanger_cdna.C_scaffold_146000007 | X. tropicalis |
JGI | 4.1 | fgenesh1_kg.C_scaffold_146000007 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_146000042 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_146000043 | X. tropicalis |
JGI | 4.1 | fgenesh1_pm.C_scaffold_146000013 | X. tropicalis |
mRNAs based on gene models(35)
Source | Version | Model | Species |
NCBI | 10.0 | mRNA055069 | X. tropicalis |
NCBI | 10.1 | XBmRNA33973 | X. laevis.L |
NCBI | 10.1 | XBmRNA39097 | X. laevis.S |
ENSEMBL | 10.0 | ENSXETT00000034066 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000060905 | X. tropicalis |
JGI | 9.1 | Xelaev18022367m | X. laevis.L |
JGI | 9.1 | Xelaev18024679m | X. laevis.S |
Xenbase | 9.1 | rna4304 | X. tropicalis |
Xenbase | 9.2 | rna59454 | X. laevis.L |
Xenbase | 9.2 | rna9146 | X. laevis.S |
ENSEMBL | 9.1 | ENSXETT00000072224 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000068097 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000034066 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000070249 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000060905 | X. tropicalis |
JGI | 8.0 | Xetrov14018182m | X. tropicalis |
JGI | 7.1 | Xetro.D00537.1 | X. tropicalis |
JGI | 7.1 | Xetro.D00537.2 | X. tropicalis |
JGI | 7.2 | Xelaev16041263m | X. laevis.L |
JGI | 6.0 | XeXenL6RMv10007425m | X. laevis.L |
JGI | 6.0 | XeXenL6RMv10035071m | X. laevis.L |
JGI | 4.1 | e_gw1.146.5.1 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETT00000034066 | X. tropicalis |
JGI | 4.1 | e_gw1.146.127.1 | X. tropicalis |
JGI | 4.1 | e_gw1.146.129.1 | X. tropicalis |
JGI | 4.1 | gw1.146.127.1 | X. tropicalis |
JGI | 4.1 | gw1.146.129.1 | X. tropicalis |
JGI | 4.1 | gw1.146.5.1 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_kg.C_1460007 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_1460042 | X. tropicalis |
JGI | 4.1 | fgenesh1_Sanger_cdna.C_scaffold_146000007 | X. tropicalis |
JGI | 4.1 | fgenesh1_kg.C_scaffold_146000007 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_146000042 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_146000043 | X. tropicalis |
JGI | 4.1 | fgenesh1_pm.C_scaffold_146000013 | X. tropicalis |
mRNAs from cDNA libraries (10)
Clone | Accession | Species | Library | Anatomy | Stage |
TTpA029a01 | CU075811 | X. tropicalis | XGC-tadpole | whole organism | NF stage 35 and 36 to NF stage 40 |
IMAGE:7690853 | BC161099 | X. tropicalis | NIH_XGC_tropTe4 | testis | frog |
NM_001122796 | X. tropicalis | ||||
IMAGE:6864354 | BC057697 | X. laevis.L | NICHD_XGC_Emb1 | whole organism | NF stage 10 |
AF305695 | X. laevis.L | ||||
NM_001086461 | X. laevis.L | ||||
XM_018260405 | X. laevis.S | ||||
XM_018260404 | X. laevis.S | ||||
XM_018260403 | X. laevis.S | ||||
XM_041561080 | X. laevis.S |