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Summary Expression Phenotypes Gene Literature (1) GO Terms (10) Nucleotides (162) Proteins (56) Interactants (338) Wiki
XB-GENEPAGE-853379

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for setdb1 - All

Models - Gene (30)
Models - mRNA (34)
mRNAs (10)
ESTs (54)

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g010810 X. tropicalis
NCBI 10.1 XBXL10_1g36534 X. laevis.L
NCBI 10.1 XBXL10_1g38594 X. laevis.S
ENSEMBL 10.0 setdb1 X. tropicalis
JGI 9.1 Xelaev18040344m.g X. laevis.L
JGI 9.1 Xelaev18042716m.g X. laevis.S
Xenbase 9.1 gene510 X. tropicalis
Xenbase 9.2 gene40699 X. laevis.L
Xenbase 9.2 gene14479 X. laevis.S
ENSEMBL 9.1 setdb1 X. tropicalis
JGI 8.0 Xetrov14036070m.g X. tropicalis
JGI 7.1 Xetro.K05079 X. tropicalis
JGI 7.2 Xelaev16016456m.g X. laevis.L
JGI 6.0 XeXenL6RMv10013225m.g X. laevis.L
JGI 6.0 XeXenL6RMv10031721m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000008936 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1510022 X. tropicalis
JGI 4.1 gw1.151.123.1 X. tropicalis
JGI 4.1 gw1.151.156.1 X. tropicalis
JGI 4.1 gw1.151.3.1 X. tropicalis
JGI 4.1 e_gw1.151.123.1 X. tropicalis
JGI 4.1 e_gw1.151.156.1 X. tropicalis
JGI 4.1 e_gw1.151.3.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1510045 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1510003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1510123 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1510156 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1510063 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_151000063 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_151000022 X. tropicalis

Models - mRNA (34)

Source Version Model Species
NCBI 10.0 mRNA053565 X. tropicalis
NCBI 10.1 XBmRNA68959 X. laevis.L
NCBI 10.1 XBmRNA72839 X. laevis.S
ENSEMBL 10.0 ENSXETT00000082886 X. tropicalis
JGI 9.1 Xelaev18040344m X. laevis.L
JGI 9.1 Xelaev18042716m X. laevis.S
Xenbase 9.1 rna1583 X. tropicalis
Xenbase 9.2 rna82821 X. laevis.L
Xenbase 9.2 rna42153 X. laevis.S
ENSEMBL 9.1 ENSXETT00000082886 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089723 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082154 X. tropicalis
ENSEMBL 9.1 ENSXETT00000019584 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088141 X. tropicalis
JGI 8.0 Xetrov14036070m X. tropicalis
JGI 7.1 Xetro.K05079.1 X. tropicalis
JGI 7.2 Xelaev16016456m X. laevis.L
JGI 6.0 XeXenL6RMv10013225m X. laevis.L
JGI 6.0 XeXenL6RMv10031721m X. laevis.L
JGI 4.1 estExt_fgenesh1_pm.C_1510022 X. tropicalis
ENSEMBL 4.1 ENSXETT00000019584 X. tropicalis
JGI 4.1 e_gw1.151.123.1 X. tropicalis
JGI 4.1 e_gw1.151.156.1 X. tropicalis
JGI 4.1 e_gw1.151.3.1 X. tropicalis
JGI 4.1 gw1.151.123.1 X. tropicalis
JGI 4.1 gw1.151.156.1 X. tropicalis
JGI 4.1 gw1.151.3.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1510045 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1510003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1510123 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1510156 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1510063 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_151000063 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_151000022 X. tropicalis

mRNAs (10)

Clone Accession Species Library Anatomy Stage
NM_001251835 X. tropicalis
IMAGE:5078862 BC072374 X. laevis.L
NM_001091607 X. laevis.L
XM_018233433 X. laevis.S
XM_018233432 X. laevis.S
XM_018233431 X. laevis.S
XM_018233430 X. laevis.S
XM_041571995 X. laevis.L
XM_041574433 X. laevis.S
XM_041574432 X. laevis.S

ESTs (54)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8890009 EL849213 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8954190 EL663409 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8957039 EL662495 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
CAAO12387 CX963268 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7549051 CX483859 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7693422 CX920649 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7674880 CX885363 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7671893 CX880259 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7561007 CX463919 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524759 CX439631 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr32F05 CN108764 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr19F06 CN101792 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr17H22 CN100507 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:5384287 BQ396784 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:8890009 EL849214 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7693422 CX920648 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7674880 CX885362 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7549051 CX483858 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561007 CX463918 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr19F06 CN101791 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:5384287 BQ396783 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
xl308l17 DC125645 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl340l04 DC135109 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk8k03ex DC062112 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk110n09ex DC039103 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8542123 EB466500 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:8320375 DY573831 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8321543 DY566824 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7982412 DR727385 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL478c09ex BP695663 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL422f06ex BP676585 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998F227825 BX854613 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGp998E228660 BX843352 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
XL004b05 BJ030411 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL048c21 BJ039024 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5571703 BQ736586 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4783781 BM262536 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:4084646 BG893174 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3475796 BG892792 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3557373 BG162476 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3401299 BE669367 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3201045 AW767549 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
PBX0123A01 AW642910 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0066E09 AW638136 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0061D06 AW637687 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:8542123 EC277040 3' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
XL048c21 BJ053776 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5278796 BQ398600 3' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:4783781 BM262189 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3475791 BG885884 3' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3475796 BG885856 3' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3557373 BG162594 3' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3430504 BF612811 3' X. laevis.L Wellcome CRC pcDNAI egg egg unfertilized egg stage
IMAGE:3201045 AW767733 3' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23