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XB-GENEPAGE-852973
msx2 msh homeobox 2
Anatomical Phenotypes
Phenotypes manually curated with terms from the Xenopus phenotype ontology
covering anatomical, gene ontology, and neurobehavioral phenotypes.
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| abnormal roof of mouth morphology (2 sources), absent planum trabeculare anticum (2 sources), decreased width of the craniofacial region (2 sources), abnormal basihyal morphology (1 source), abnormal ceratohyal morphology (1 source), abnormal infrarostral morphology (1 source), abnormal Meckel's cartilage morphology (1 source), abnormal mouth morphology (1 source), abnormal palatoquadrati morphology (1 source), abnormal trabecula cranii morphology (1 source), absent suprarostral plate (1 source), decreased size of the craniofacial region (1 source), decreased size of the head mesenchyme (1 source) |
| Expression Phenotypes
Gene expression phenotype annotations where the gene of interest has been
disrupted (manipulated) or is the gene assayed (assayed). Computed annotations are derived from
differential expression analysis from Xenbase processed GEO data with the criteria of a TPM >= 1,
FDR <= 0.05 and an absolute LogFC >= 2.
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| Manual annotations: msx2 assayed (4 sources) |
| Computed annotations: msx2 assayed (21 sources) |
| Experiments (Reagents)
These are short form descriptions of experiments using reagents targeting
the gene of interest.
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| Xla Wt + lhx8 MO + msx2 MO (4 sources), Xla Wt + lhx8 MO + msx2 MO (1 source), Xla Wt + lhx8 MO + msx2 MO + BMS453 (1 source) |
| Monarch Ortholog Phenotypes
These phenotypes are associated with this gene with a has phenotype relation via Monarch.
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| Human (29 sources): Aplasia cutis congenita of scalp, Bicoronal synostosis, Brachycephaly, Brachydactyly, Brachyturricephaly, Cleft palate, Cleft soft palate, Cleft upper lip, Craniosynostosis, Dermoid cyst, [+] |
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View all ortholog results at Monarch |