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Xenopus pitx3 target genes lhx1 and xnr5 are identified using a novel three-fluor flow cytometry-based analysis of promoter activation and repression. , Hooker LN, Smoczer C, Abbott S, Fakhereddin M, Hudson JW, Crawford MJ ., Dev Dyn. September 1, 2017; 246 (9): 657-669.
Spemann organizer transcriptome induction by early beta-catenin, Wnt, Nodal, and Siamois signals in Xenopus laevis. , Ding Y , Ploper D, Sosa EA, Colozza G , Moriyama Y , Benitez MD, Zhang K, Merkurjev D, De Robertis EM ., Proc Natl Acad Sci U S A. April 11, 2017; 114 (15): E3081-E3090.
Nodal signalling in Xenopus: the role of Xnr5 in left/ right asymmetry and heart development. , Tadjuidje E , Kofron M , Mir A, Wylie C , Heasman J , Cha SW ., Open Biol. August 1, 2016; 6 (8):
FoxH1 mediates a Grg4 and Smad2 dependent transcriptional switch in Nodal signaling during Xenopus mesoderm development. , Reid CD, Steiner AB, Yaklichkin S , Lu Q, Wang S, Hennessy M, Kessler DS ., Dev Biol. June 1, 2016; 414 (1): 34-44.
Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development. , Owens ND, Blitz IL , Lane MA, Patrushev I , Overton JD, Gilchrist MJ , Cho KW , Khokha MK ., Cell Rep. January 26, 2016; 14 (3): 632-47.
Two different network topologies yield bistability in models of mesoderm and anterior mesendoderm specification in amphibians. , Brown LE, King JR, Loose M., J Theor Biol. July 21, 2014; 353 67-77.
Klf4 is required for germ-layer differentiation and body axis patterning during Xenopus embryogenesis. , Cao Q, Zhang X, Lu L, Yang L, Gao J, Gao Y, Ma H, Cao Y ., Development. November 1, 2012; 139 (21): 3950-61.
Ventx factors function as Nanog-like guardians of developmental potential in Xenopus. , Scerbo P , Girardot F , Vivien C, Markov GV, Luxardi G , Demeneix B , Kodjabachian L , Coen L., PLoS One. January 1, 2012; 7 (5): e36855.
Geminin is required for zygotic gene expression at the Xenopus mid- blastula transition. , Kerns SL, Schultz KM, Barry KA, Thorne TM, McGarry TJ., PLoS One. January 1, 2012; 7 (5): e38009.
KDEL tagging: a method for generating dominant-negative inhibitors of the secretion of TGF-beta superfamily proteins. , Matsukawa S , Moriyama Y , Hayata T, Sasaki H, Ito Y , Asashima M , Kuroda H ., Int J Dev Biol. January 1, 2012; 56 (5): 351-6.
mNanog possesses dorsal mesoderm-inducing ability by modulating both BMP and Activin/ nodal signaling in Xenopus ectodermal cells. , Miyazaki A, Ishii K, Yamashita S, Nejigane S, Matsukawa S , Ito Y , Onuma Y , Asashima M , Michiue T ., PLoS One. January 1, 2012; 7 (10): e46630.
An essential role for transcription before the MBT in Xenopus laevis. , Skirkanich J , Luxardi G , Yang J , Kodjabachian L , Klein PS ., Dev Biol. September 15, 2011; 357 (2): 478-91.
Xrel3/ XrelA attenuates β-catenin-mediated transcription during mesoderm formation in Xenopus embryos. , Kennedy MW , Kao KR ., Biochem J. April 1, 2011; 435 (1): 247-57.
APOBEC2, a selective inhibitor of TGFβ signaling, regulates left- right axis specification during early embryogenesis. , Vonica A , Rosa A, Arduini BL, Brivanlou AH ., Dev Biol. February 1, 2011; 350 (1): 13-23.
beta-Catenin primes organizer gene expression by recruiting a histone H3 arginine 8 methyltransferase, Prmt2. , Blythe SA , Cha SW , Tadjuidje E , Heasman J , Klein PS ., Dev Cell. August 17, 2010; 19 (2): 220-31.
Distinct Xenopus Nodal ligands sequentially induce mesendoderm and control gastrulation movements in parallel to the Wnt/PCP pathway. , Luxardi G , Marchal L, Thomé V, Kodjabachian L ., Development. February 1, 2010; 137 (3): 417-26.
Oct25 represses transcription of nodal/activin target genes by interaction with signal transducers during Xenopus gastrulation. , Cao Y , Siegel D , Oswald F, Knöchel W ., J Biol Chem. December 5, 2008; 283 (49): 34168-77.
The Sox axis, Nodal signaling, and germ layer specification. , Zhang C, Klymkowsky MW ., Differentiation. July 1, 2007; 75 (6): 536-45.
Monomeric mature protein of Nodal-related 3 activates Xbra expression. , Haramoto Y , Takahashi S , Asashima M ., Dev Genes Evol. January 1, 2007; 217 (1): 29-37.
Dullard promotes degradation and dephosphorylation of BMP receptors and is required for neural induction. , Satow R, Kurisaki A, Chan TC , Hamazaki TS, Asashima M ., Dev Cell. December 1, 2006; 11 (6): 763-74.
Hex acts with beta-catenin to regulate anteroposterior patterning via a Groucho-related co-repressor and Nodal. , Zamparini AL, Watts T, Gardner CE, Tomlinson SR, Johnston GI, Brickman JM ., Development. September 1, 2006; 133 (18): 3709-22.
Xenopus POU factors of subclass V inhibit activin/ nodal signaling during gastrulation. , Cao Y , Siegel D , Knöchel W ., Mech Dev. August 1, 2006; 123 (8): 614-25.
Nodal-related gene Xnr5 is amplified in the Xenopus genome. , Takahashi S , Onuma Y , Yokota C, Westmoreland JJ, Asashima M , Wright CV ., Genesis. July 1, 2006; 44 (7): 309-21.
Vg 1 is an essential signaling molecule in Xenopus development. , Birsoy B, Kofron M , Schaible K, Wylie C , Heasman J ., Development. January 1, 2006; 133 (1): 15-20.
SOX7 and SOX18 are essential for cardiogenesis in Xenopus. , Zhang C, Basta T, Klymkowsky MW ., Dev Dyn. December 1, 2005; 234 (4): 878-91.
Xnr2 and Xnr5 unprocessed proteins inhibit Wnt signaling upstream of dishevelled. , Onuma Y , Takahashi S , Haramoto Y , Tanegashima K , Yokota C, Whitman M , Asashima M ., Dev Dyn. December 1, 2005; 234 (4): 900-10.
Maternal Xenopus Zic2 negatively regulates Nodal-related gene expression during anteroposterior patterning. , Houston DW , Wylie C ., Development. November 1, 2005; 132 (21): 4845-55.
SOX7 is an immediate-early target of VegT and regulates Nodal-related gene expression in Xenopus. , Zhang C, Basta T, Fawcett SR, Klymkowsky MW ., Dev Biol. February 15, 2005; 278 (2): 526-41.
XPACE4 is a localized pro-protein convertase required for mesoderm induction and the cleavage of specific TGFbeta proteins in Xenopus development. , Birsoy B, Berg L, Williams PH, Smith JC , Wylie CC , Christian JL , Heasman J ., Development. February 1, 2005; 132 (3): 591-602.
New roles for FoxH1 in patterning the early embryo. , Kofron M , Puck H, Standley H , Wylie C , Old R , Whitman M , Heasman J ., Development. October 1, 2004; 131 (20): 5065-78.
The beta-catenin/ VegT-regulated early zygotic gene Xnr5 is a direct target of SOX3 regulation. , Zhang C, Basta T, Jensen ED, Klymkowsky MW ., Development. December 1, 2003; 130 (23): 5609-24.
PP2A:B56epsilon is required for Wnt/beta-catenin signaling during embryonic development. , Yang J , Wu J , Tan C, Klein PS ., Development. December 1, 2003; 130 (23): 5569-78.
VegT activation of the early zygotic gene Xnr5 requires lifting of Tcf-mediated repression in the Xenopus blastula. , Hilton E , Rex M, Old R ., Mech Dev. October 1, 2003; 120 (10): 1127-38.
Beta-catenin/Tcf-regulated transcription prior to the midblastula transition. , Yang J , Tan C, Darken RS , Wilson PA , Klein PS ., Development. December 1, 2002; 129 (24): 5743-52.
Multiple interactions between maternally-activated signalling pathways control Xenopus nodal-related genes. , Rex M, Hilton E , Old R ., Int J Dev Biol. March 1, 2002; 46 (2): 217-26.
Multiple nodal-related genes act coordinately in Xenopus embryogenesis. , Onuma Y , Takahashi S , Yokota C, Asashima M ., Dev Biol. January 1, 2002; 241 (1): 94-105.
Pluripotent cells (stem cells) and their determination and differentiation in early vertebrate embryogenesis. , Tiedemann H, Asashima M , Grunz H , Knöchel W ., Dev Growth Differ. October 1, 2001; 43 (5): 469-502.
Two novel nodal-related genes initiate early inductive events in Xenopus Nieuwkoop center. , Takahashi S , Yokota C, Takano K, Tanegashima K , Onuma Y , Goto J, Asashima M ., Development. December 1, 2000; 127 (24): 5319-29.