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The polycomb group protein EED interacts with YY1, and both proteins induce neural tissue in Xenopus embryos. , Satijn DP, Hamer KM, den Blaauwen J, Otte AP., Mol Cell Biol. February 1, 2001; 21 (4): 1360-9.
Xenopus Enhancer of Zeste ( XEZ); an anteriorly restricted polycomb gene with a role in neural patterning. , Barnett MW, Seville RA, Nijjar S, Old RW , Jones EA ., Mech Dev. April 1, 2001; 102 (1-2): 157-67.
Identification of putative interaction partners for the Xenopus Polycomb-group protein Xeed. , Showell C , Cunliffe VT., Gene. May 29, 2002; 291 (1-2): 95-104.
Characterization of the expression pattern of the PRC2 core subunit Suz12 during embryonic development of Xenopus laevis. , Aldiri I , Vetter ML ., Dev Dyn. December 1, 2009; 238 (12): 3185-92.
Jarid2/ Jumonji coordinates control of PRC2 enzymatic activity and target gene occupancy in pluripotent cells. , Peng JC, Valouev A, Swigut T, Zhang J, Zhao Y, Sidow A, Wysocka J., Cell. December 24, 2009; 139 (7): 1290-302.
Corepressor protein CDYL functions as a molecular bridge between polycomb repressor complex 2 and repressive chromatin mark trimethylated histone lysine 27. , Zhang Y , Zhang Y , Yang X, Gui B, Xie G, Zhang D, Shang Y, Liang J., J Biol Chem. December 9, 2011; 286 (49): 42414-42425.
Comparative expression analysis of the H3K27 demethylases, JMJD3 and UTX, with the H3K27 methylase, EZH2, in Xenopus. , Kawaguchi A, Ochi H , Sudou N , Ogino H ., Int J Dev Biol. January 1, 2012; 56 (4): 295-300.
Characterization of a novel Xenopus tropicalis cell line as a model for in vitro studies. , Sinzelle L, Thuret R , Hwang HY, Herszberg B, Paillard E, Bronchain OJ , Stemple DL , Dhorne-Pollet S, Pollet N ., Genesis. March 1, 2012; 50 (3): 316-24.
PRC2 during vertebrate organogenesis: A complex in transition. , Aldiri I , Vetter ML ., Dev Biol. July 15, 2012; 367 (2): 91-9.
KDM2B links the Polycomb Repressive Complex 1 ( PRC1) to recognition of CpG islands. , Farcas AM, Blackledge NP, Sudbery I, Long HK, McGouran JF, Rose NR, Lee S, Sims D , Cerase A, Sheahan TW, Koseki H, Brockdorff N, Ponting CP, Kessler BM, Klose RJ., Elife. December 18, 2012; 1 e00205.
Pharmacological reversal of histone methylation presensitizes pancreatic cancer cells to nucleoside drugs: in vitro optimization and novel nanoparticle delivery studies. , Hung SW, Mody H, Marrache S, Bhutia YD, Davis F, Cho JH, Zastre J, Dhar S, Chu CK, Govindarajan R., PLoS One. January 1, 2013; 8 (8): e71196.
Epigenetic conservation at gene regulatory elements revealed by non-methylated DNA profiling in seven vertebrates. , Long HK, Sims D , Heger A, Blackledge NP, Kutter C, Wright ML, Grützner F, Odom DT, Patient R , Ponting CP, Klose RJ., Elife. February 26, 2013; 2 e00348.
Polycomb repressive complex PRC2 regulates Xenopus retina development downstream of Wnt/ β-catenin signaling. , Aldiri I , Moore KB , Hutcheson DA , Zhang J, Vetter ML ., Development. July 1, 2013; 140 (14): 2867-78.
PAF and EZH2 induce Wnt/ β-catenin signaling hyperactivation. , Jung HY , Jun S, Lee M, Kim HC , Wang X , Ji H, McCrea PD , Park JI ., Mol Cell. October 24, 2013; 52 (2): 193-205.
A genome-wide survey of maternal and embryonic transcripts during Xenopus tropicalis development. , Paranjpe SS, Jacobi UG, van Heeringen SJ, Veenstra GJ ., BMC Genomics. November 6, 2013; 14 762.
catRAPID omics: a web server for large-scale prediction of protein-RNA interactions. , Agostini F, Zanzoni A, Klus P, Marchese D, Cirillo D, Tartaglia GG., Bioinformatics. November 15, 2013; 29 (22): 2928-30.
The Xenopus homologue of Down syndrome critical region protein 6 drives dorsoanterior gene expression and embryonic axis formation by antagonising polycomb group proteins. , Li HY, Grifone R, Saquet A, Carron C, Shi DL ., Development. December 1, 2013; 140 (24): 4903-13.
Occupancy of tissue-specific cis-regulatory modules by Otx2 and TLE/Groucho for embryonic head specification. , Yasuoka Y , Suzuki Y, Takahashi S , Someya H, Sudou N , Haramoto Y , Cho KW , Asashima M , Sugano S, Taira M ., Nat Commun. July 9, 2014; 5 4322.
Snail2/ Slug cooperates with Polycomb repressive complex 2 (PRC2) to regulate neural crest development. , Tien CL, Jones A, Wang H, Gerigk M, Nozell S, Chang C ., Development. February 15, 2015; 142 (4): 722-31.
At new heights - endodermal lineages in development and disease. , Ober EA, Grapin-Botton A., Development. June 1, 2015; 142 (11): 1912-1917.
Specification of anteroposterior axis by combinatorial signaling during Xenopus development. , Carron C, Shi DL ., Wiley Interdiscip Rev Dev Biol. January 1, 2016; 5 (2): 150-68.
Similarity in gene-regulatory networks suggests that cancer cells share characteristics of embryonic neural cells. , Zhang Z , Lei A, Xu L, Chen L, Chen Y , Chen Y , Zhang X, Gao Y, Yang X, Zhang M, Cao Y , Cao Y ., J Biol Chem. August 4, 2017; 292 (31): 12842-12859.
Biophysical characterization of histone H3.3 K27M point mutation. , Hetey S, Boros-Oláh B, Kuik-Rózsa T, Li Q , Karányi Z, Szabó Z, Roszik J, Szalóki N, Vámosi G, Tóth K, Székvölgyi L., Biochem Biophys Res Commun. August 26, 2017; 490 (3): 868-875.
MicroRNA-31 is required for astrocyte specification. , Meares GP, Rajbhandari R, Gerigk M, Tien CL, Chang C , Fehling SC, Rowse A, Mulhern KC, Nair S, Gray GK, Berbari NF, Bredel M, Benveniste EN, Nozell SE., Glia. May 1, 2018; 66 (5): 987-998.
Xenopus SOX5 enhances myogenic transcription indirectly through transrepression. , Della Gaspera B , Chesneau A, Weill L, Charbonnier F, Chanoine C ., Dev Biol. October 15, 2018; 442 (2): 262-275.
Endodermal Maternal Transcription Factors Establish Super-Enhancers during Zygotic Genome Activation. , Paraiso KD , Blitz IL , Coley M, Cheung J, Sudou N , Taira M , Cho KWY ., Cell Rep. June 4, 2019; 27 (10): 2962-2977.e5.
The regulatory proteins DSCR6 and Ezh2 oppositely regulate Stat3 transcriptional activity in mesoderm patterning during Xenopus development. , Loreti M, Shi DL , Carron C., J Biol Chem. February 28, 2020; 295 (9): 2724-2735.
RBL1 (p107) functions as tumor suppressor in glioblastoma and small-cell pancreatic neuroendocrine carcinoma in Xenopus tropicalis. , Naert T, Dimitrakopoulou D, Tulkens D, Demuynck S, Carron M, Noelanders R, Eeckhout L, Van Isterdael G, Deforce D, Vanhove C, Van Dorpe J, Creytens D, Vleminckx K , Vleminckx K ., Oncogene. March 1, 2020; 39 (13): 2692-2706.
Comparative gene expression profiling between optic nerve and spinal cord injury in Xenopus laevis reveals a core set of genes inherent in successful regeneration of vertebrate central nervous system axons. , Belrose JL, Prasad A, Sammons MA, Gibbs KM , Szaro BG ., BMC Genomics. August 5, 2020; 21 (1): 540.
Maximizing CRISPR/Cas9 phenotype penetrance applying predictive modeling of editing outcomes in Xenopus and zebrafish embryos. , Naert T, Tulkens D, Edwards NA , Carron M, Shaidani NI , Wlizla M , Boel A, Demuynck S, Horb ME , Coucke P, Willaert A, Zorn AM , Vleminckx K , Vleminckx K ., Sci Rep. September 4, 2020; 10 (1): 14662.
Structural basis for PRC2 decoding of active histone methylation marks H3K36me2/3. , Finogenova K, Bonnet J, Poepsel S, Schäfer IB, Finkl K, Schmid K, Litz C, Strauss M, Benda C, Müller J., Elife. November 19, 2020; 9
JARID2 and AEBP2 regulate PRC2 in the presence of H2AK119ub1 and other histone modifications. , Kasinath V, Beck C, Sauer P, Poepsel S, Kosmatka J, Faini M, Toso D, Aebersold R, Nogales E., Science. January 22, 2021; 371 (6527):
Structures of monomeric and dimeric PRC2: EZH1 reveal flexible modules involved in chromatin compaction. , Grau D, Zhang Y , Lee CH , Valencia-Sánchez M, Zhang J, Wang M, Holder M, Svetlov V, Tan D, Nudler E, Reinberg D, Walz T, Armache KJ., Nat Commun. January 29, 2021; 12 (1): 714.
Transcriptome and Methylome Analysis Reveal Complex Cross-Talks between Thyroid Hormone and Glucocorticoid Signaling at Xenopus Metamorphosis. , Buisine N , Grimaldi A , Jonchere V, Rigolet M, Blugeon C, Hamroune J, Sachs LM ., Cells. September 9, 2021; 10 (9):
CRISPR-SID: Identifying EZH2 as a druggable target for desmoid tumors via in vivo dependency mapping. , Naert T, Tulkens D, Van Nieuwenhuysen T, Przybyl J, Demuynck S, van de Rijn M, Al-Jazrawe M, Alman BA, Coucke PJ, De Leeneer K, Vanhove C, Savvides SN, Creytens D, Vleminckx K , Vleminckx K ., Proc Natl Acad Sci U S A. November 23, 2021; 118 (47):
Developmental and Injury-induced Changes in DNA Methylation in Regenerative versus Non-regenerative Regions of the Vertebrate Central Nervous System. , Reverdatto S, Prasad A, Belrose JL, Zhang X, Sammons MA, Gibbs KM , Szaro BG ., BMC Genomics. January 4, 2022; 23 (1): 2.
Engagement of Foxh1 in chromatin regulation revealed by protein interactome analyses. , Zhou JJ , Pham PD, Han H, Wang W, Cho KWY., Dev Growth Differ. August 1, 2022; 64 (6): 297-305.
Chromatin accessibility analysis reveals distinct functions for HDAC and EZH2 activities in early appendage regeneration. , Arbach HE, Harland-Dunaway M, Braden C, Chitsazan AD, Pickering E, Patel JH, Wills AE ., Wound Repair Regen. November 1, 2022; 30 (6): 707-725.
Evolutionarily distinct and sperm-specific supersized chromatin loops are marked by Helitron transposons in Xenopus tropicalis. , Shi Z, Xu J, Niu L, Shen W, Yan S , Tan Y, Quan X, Cheung E, Huang K, Chen Y , Chen Y , Li L, Hou C., Cell Rep. March 28, 2023; 42 (3): 112151.
Mutations in the histone methyltransferase Ezh2 drive context-dependent leukemia in Xenopus tropicalis. , Tulkens D, Boelens M, Naert T, Carron M, Demuynck S, Dewaele S, Van Isterdael G, Creytens D, Pieters T, Goossens S, Van Vlierberghe P, Vleminckx K ., Leukemia. December 1, 2023; 37 (12): 2404-2413.