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Profiling ubiquitin signalling with UBIMAX reveals DNA damage- and SCFβ-Trcp1-dependent ubiquitylation of the actin-organizing protein Dbn1. , Colding-Christensen CS, Kakulidis ES, Arroyo-Gomez J, Hendriks IA, Arkinson C, Fábián Z, Gambus A, Mailand N, Duxin JP , Nielsen ML., Nat Commun. December 14, 2023; 14 (1): 8293.
APE1 senses DNA single-strand breaks for repair and signaling. , Lin Y, Raj J, Li J, Ha A, Hossain MA, Richardson C, Mukherjee P, Yan S ., Nucleic Acids Res. February 28, 2020; 48 (4): 1925-1940.
Distinct roles of XRCC1 in genome integrity in Xenopus egg extracts. , Cupello S, Lin Y, Yan S ., Biochem J. December 23, 2019; 476 (24): 3791-3804.
Methods for Studying DNA Single-Strand Break Repair and Signaling in Xenopus laevis Egg Extracts. , Lin Y, Ha A, Yan S ., Methods Mol Biol. January 1, 2019; 1999 161-172.
APE2 promotes DNA damage response pathway from a single-strand break. , Lin Y, Bai L, Cupello S, Hossain MA, Deem B, McLeod M, Raj J, Yan S ., Nucleic Acids Res. March 16, 2018; 46 (5): 2479-2494.
Nephron Patterning: Lessons from Xenopus, Zebrafish, and Mouse Studies. , Desgrange A, Cereghini S., Cells. September 11, 2015; 4 (3): 483-99.
DNA ligase III acts as a DNA strand break sensor in the cellular orchestration of DNA strand break repair. , Abdou I, Poirier GG, Hendzel MJ, Weinfeld M., Nucleic Acids Res. January 1, 2015; 43 (2): 875-92.
Left- right patterning in Xenopus conjoined twin embryos requires serotonin signaling and gap junctions. , Vandenberg LN, Blackiston DJ , Rea AC, Dore TM, Levin M ., Int J Dev Biol. January 1, 2014; 58 (10-12): 799-809.
Damage response of XRCC1 at sites of DNA single strand breaks is regulated by phosphorylation and ubiquitylation after degradation of poly(ADP-ribose). , Wei L, Nakajima S, Hsieh CL, Kanno S, Masutani M, Levine AS, Yasui A, Lan L., J Cell Sci. October 1, 2013; 126 (Pt 19): 4414-23.
HNF1B controls proximal-intermediate nephron segment identity in vertebrates by regulating Notch signalling components and Irx1/2. , Heliot C, Desgrange A, Buisson I , Prunskaite-Hyyryläinen R, Shan J, Vainio S, Umbhauer M , Cereghini S., Development. February 1, 2013; 140 (4): 873-85.
DNA 3'-phosphatase activity is critical for rapid global rates of single-strand break repair following oxidative stress. , Breslin C, Caldecott KW., Mol Cell Biol. September 1, 2009; 29 (17): 4653-62.
NEIL1 is the major DNA glycosylase that processes 5-hydroxyuracil in the proximity of a DNA single-strand break. , Parsons JL, Kavli B, Slupphaug G, Dianov GL., Biochemistry. April 3, 2007; 46 (13): 4158-63.
Condensin I interacts with the PARP-1- XRCC1 complex and functions in DNA single-strand break repair. , Heale JT, Ball AR, Schmiesing JA, Kim JS , Kong X, Zhou S, Hudson DF, Earnshaw WC, Yokomori K., Mol Cell. March 17, 2006; 21 (6): 837-48.
A novel cytoplasmic protein with RNA-binding motifs is an autoantigen in human hepatocellular carcinoma. , Zhang JY, Chan EK, Peng XX, Tan EM., J Exp Med. April 5, 1999; 189 (7): 1101-10.
Effects of Xenopus laevis mitochondrial single-stranded DNA-binding protein on primer-template binding and 3'-->5' exonuclease activity of DNA polymerase gamma. , Mikhailov VS, Bogenhagen DF ., J Biol Chem. August 2, 1996; 271 (31): 18939-46.
Cloning of human and rat cDNAs encoding the mitochondrial single-stranded DNA-binding protein ( SSB). , Tiranti V, Rocchi M, DiDonato S, Zeviani M., Gene. April 30, 1993; 126 (2): 219-25.
A single-stranded DNA binding protein required for mitochondrial DNA replication in S. cerevisiae is homologous to E. coli SSB. , Van Dyck E, Foury F, Stillman B, Brill SJ., EMBO J. September 1, 1992; 11 (9): 3421-30.
Primary structure of the two variants of Xenopus laevis mtSSB, a mitochondrial DNA binding protein. , Ghrir R, Lecaer JP, Dufresne C, Gueride M., Arch Biochem Biophys. December 1, 1991; 291 (2): 395-400.
Structural and functional studies of the rat mitochondrial single strand DNA binding protein P16. , Hoke GD, Pavco PA, Ledwith BJ, Van Tuyle GC., Arch Biochem Biophys. October 1, 1990; 282 (1): 116-24.
A major single-stranded DNA binding protein from ovaries of the frog, Xenopus laevis, is lactate dehydrogenase. , Kaiserman HB, Odenwald WF, Stowers DJ, Poll EH, Benbow RM., Biochim Biophys Acta. June 1, 1989; 1008 (1): 23-30.
The amino-terminal sequence of the Xenopus laevis mitochondrial SSB is homologous to that of the Escherichia coli protein. , Mahoungou C, Ghrir R, Lecaer JP, Mignotte B, Barat-Gueride M., FEBS Lett. August 1, 1988; 235 (1-2): 267-70.