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Summary Expression Phenotypes Gene Literature (545) GO Terms (27) Nucleotides (552) Proteins (48) Interactants (2333) Wiki
XB-GENEPAGE-484552

Papers associated with sox2



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referenced by:

Development of subdomains in the medial pallium of Xenopus laevis and Trachemys scripta: Insights into the anamniote-amniote transition., Jiménez S, Moreno N., Front Neuroanat. 16 1039081.                      

Cell lineage-guided mass spectrometry reveals increased energy metabolism and reactive oxygen species in the vertebrate organizer., Baxi AB, Li J, Quach VM, Pade LR, Moody SA, Nemes P., Proc Natl Acad Sci U S A. February 6, 2024; 121 (6): e2311625121.                  

A CRISPR-Cas9-mediated versatile method for targeted integration of a fluorescent protein gene to visualize endogenous gene expression in Xenopus laevis., Mochii M, Akizuki K, Ossaka H, Kagawa N, Umesono Y, Suzuki KT., Dev Biol. February 1, 2024; 506 42-51.                                

ZSWIM4 regulates embryonic patterning and BMP signaling by promoting nuclear Smad1 degradation., Wang C, Liu Z, Zeng Y, Zhou L, Long Q, Hassan IU, Zhang Y, Qi X, Cai D, Mao B, Lu G, Sun J, Yao Y, Deng Y, Zhao Q, Feng B, Zhou Q, Chan WY, Zhao H., EMBO Rep. February 1, 2024; 25 (2): 646-671.                                          

In vitro modeling of cranial placode differentiation: Recent advances, challenges, and perspectives., Griffin C, Saint-Jeannet JP., Dev Biol. February 1, 2024; 506 20-30.

BRCA1 and ELK-1 regulate neural progenitor cell fate in the optic tectum in response to visual experience in Xenopus laevis tadpoles., Huang LC, McKeown CR, He HY, Ta AC, Cline HT., Proc Natl Acad Sci U S A. January 16, 2024; 121 (3): e2316542121.                        

Head organizer: Cerberus and IGF cooperate in brain induction in Xenopus embryos., Azbazdar Y, Pera EM, De Robertis EM., Cells Dev. December 16, 2023; 203897.                  

Information integration during bioelectric regulation of morphogenesis of the embryonic frog brain., Manicka S, Pai VP, Levin M., iScience. December 15, 2023; 26 (12): 108398.                                                        

The sulfotransferase XB5850668.L is required to apportion embryonic ectodermal domains., Marchak A, Neilson KM, Majumdar HD, Yamauchi K, Klein SL, Moody SA., Dev Dyn. December 1, 2023; 252 (12): 1407-1427.                  

TBC1D32 variants disrupt retinal ciliogenesis and cause retinitis pigmentosa., Bocquet B, Borday C, Erkilic N, Mamaeva D, Donval A, Masson C, Parain K, Kaminska K, Quinodoz M, Perea-Romero I, Garcia-Garcia G, Jimenez-Medina C, Boukhaddaoui H, Coget A, Leboucq N, Calzetti G, Gandolfi S, Percesepe A, Barili V, Uliana V, Delsante M, Bozzetti F, Scholl HP, Corton M, Ayuso C, Millan JM, Rivolta C, Meunier I, Perron M, Kalatzis V., JCI Insight. November 8, 2023; 8 (21):                                               

Addition of exogenous diacylglycerol enhances Wnt/β-catenin signaling through stimulation of macropinocytosis., Azbazdar Y, Tejeda-Munoz N, Monka JC, Dayrit A, Binder G, Ozhan G, De Robertis EM., iScience. October 20, 2023; 26 (10): 108075.                

Using Xenopus to discover new candidate genes involved in BOR and other congenital hearing loss syndromes., Neal SJ, Rajasekaran A, Jusić N, Taylor L, Read M, Alfandari D, Alfandari D, Pignoni F, Moody SA., J Exp Zool B Mol Dev Evol. October 13, 2023;             

Hybridization led to a rewired pluripotency network in the allotetraploid Xenopus laevis., Phelps WA, Hurton MD, Ayers TN, Carlson AE, Rosenbaum JC, Lee MT., Elife. October 3, 2023; 12                             

Protocols for transgenesis at a safe harbor site in the Xenopus laevis genome using CRISPR-Cas9., Shibata Y, Okumura A, Mochii M, Suzuki KT., STAR Protoc. September 15, 2023; 4 (3): 102382.            

β-Catenin and SOX2 Interaction Regulate Visual Experience-Dependent Cell Homeostasis in the Developing Xenopus Thalamus., Gao J, Lu Y, Luo Y, Duan X, Chen P, Zhang X, Wu X, Qiu M, Shen W., Int J Mol Sci. September 2, 2023; 24 (17):                 

Paracrine regulation of neural crest EMT by placodal MMP28., Gouignard N, Bibonne A, Mata JF, Bajanca F, Berki B, Barriga EH, Saint-Jeannet JP, Theveneau E., PLoS Biol. August 1, 2023; 21 (8): e3002261.                                      

Calcium dynamics at the neural cell primary cilium regulate Hedgehog signaling-dependent neurogenesis in the embryonic neural tube., Shim S, Goyal R, Panoutsopoulos AA, Balashova OA, Lee D, Borodinsky LN., Proc Natl Acad Sci U S A. June 6, 2023; 120 (23): e2220037120.

Npr3 regulates neural crest and cranial placode progenitors formation through its dual function as clearance and signaling receptor., Devotta A, Juraver-Geslin H, Griffin C, Saint-Jeannet JP., Elife. May 10, 2023; 12                                                       

Production and characterization of monoclonal antibodies to Xenopus proteins., Horr B, Kurtz R, Pandey A, Hoffstrom BG, Schock E, LaBonne C, Alfandari D, Alfandari D., Development. February 15, 2023; 150 (4):               

Production and characterization of monoclonal antibodies to xenopus proteins., Horr B, Kurtz R, Pandey A, Hoffstrom BG, Schock E, LaBonne C, Alfandari D, Alfandari D., Development. February 14, 2023;                 

Retinoic acid control of pax8 during renal specification of Xenopus pronephros involves hox and meis3., Durant-Vesga J, Suzuki N, Ochi H, Le Bouffant R, Eschstruth A, Ogino H, Umbhauer M, Riou JF., Dev Biol. January 1, 2023; 493 17-28.

ADAM11 a novel regulator of Wnt and BMP4 signaling in neural crest and cancer., Pandey A, Cousin H, Horr B, Alfandari D, Alfandari D., Front Cell Dev Biol. January 1, 2023; 11 1271178.                      

Zmym4 is required for early cranial gene expression and craniofacial cartilage formation., Jourdeuil K, Neilson KM, Cousin H, Tavares ALP, Majumdar HD, Alfandari D, Alfandari D, Moody SA., Front Cell Dev Biol. January 1, 2023; 11 1274788.          

Alcohol induces neural tube defects by reducing retinoic acid signaling and promoting neural plate expansion., Edri T, Cohen D, Shabtai Y, Fainsod A., Front Cell Dev Biol. January 1, 2023; 11 1282273.                    

Ash2l, an obligatory component of H3K4 methylation complexes, regulates neural crest development., Mohammadparast S, Chang C., Dev Biol. December 1, 2022; 492 14-24.                                  

Membrane potential drives the exit from pluripotency and cell fate commitment via calcium and mTOR., Sempou E, Kostiuk V, Zhu J, Cecilia Guerra M, Tyan L, Hwang W, Camacho-Aguilar E, Caplan MJ, Zenisek D, Warmflash A, Owens NDL, Khokha MK., Nat Commun. November 5, 2022; 13 (1): 6681.                                            

Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions., Johnson K, Freedman S, Braun R, LaBonne C., BMC Genomics. October 23, 2022; 23 (1): 723.                                  

CRISPR/Cas9-based simple transgenesis in Xenopus laevis., Shibata Y, Suzuki M, Hirose N, Takayama A, Sanbo C, Inoue T, Umesono Y, Agata K, Ueno N, Suzuki KT, Mochii M., Dev Biol. September 1, 2022; 489 76-83.                                                        

The homeodomain transcription factor Ventx2 regulates respiratory progenitor cell number and differentiation timing during Xenopus lung development., Rankin SA, Rankin SA, Zorn AM., Dev Growth Differ. September 1, 2022; 64 (7): 347-361.            

Functions of block of proliferation 1 during anterior development in Xenopus laevis., Gärtner C, Meßmer A, Dietmann P, Kühl M, Kühl SJ., PLoS One. August 2, 2022; 17 (8): e0273507.                        

Normal Table of Xenopus development: a new graphical resource., Zahn N, James-Zorn C, Ponferrada VG, Adams DS, Grzymkowski J, Buchholz DR, Nascone-Yoder NM, Horb M, Moody SA, Vize PD, Zorn AM., Development. July 15, 2022; 149 (14):                         

Identification and validation of candidate risk genes in endocytic vesicular trafficking associated with esophageal atresia and tracheoesophageal fistulas., Zhong G, Ahimaz P, Edwards NA, Hagen JJ, Faure C, Lu Q, Kingma P, Middlesworth W, Khlevner J, El Fiky M, Schindel D, Fialkowski E, Kashyap A, Forlenza S, Kenny AP, Zorn AM, Shen Y, Chung WK., HGG Adv. July 14, 2022; 3 (3): 100107.        

HMCES modulates the transcriptional regulation of nodal/activin and BMP signaling in mESCs., Liang T, Bai J, Zhou W, Lin H, Ma S, Zhu X, Tao Q, Xi Q., Cell Rep. July 12, 2022; 40 (2): 111038.                              

Evo-Devo of Urbilateria and its larval forms., De Robertis EM, Tejeda-Muñoz N., Dev Biol. July 1, 2022; 487 10-20.        

FGF/MAPK/Ets signaling in Xenopus ectoderm contributes to neural induction and patterning in an autonomous and paracrine manner, respectively., Hongo I, Okamoto H., Cells Dev. June 1, 2022; 170 203769.

Cilia-localized GID/CTLH ubiquitin ligase complex regulates protein homeostasis of sonic hedgehog signaling components., Hantel F, Liu H, Fechtner L, Neuhaus H, Ding J, Arlt D, Walentek P, Villavicencio-Lorini P, Gerhardt C, Hollemann T, Pfirrmann T., J Cell Sci. May 1, 2022; 135 (9):                                     

Lysosomes are required for early dorsal signaling in the Xenopus embryo., Tejeda-Muñoz N, De Robertis EM., Proc Natl Acad Sci U S A. April 26, 2022; 119 (17): e2201008119.                          

Hif1α and Wnt are required for posterior gene expression during Xenopus tropicalis tail regeneration., Patel JH, Schattinger PA, Takayoshi EE, Wills AE., Dev Biol. March 1, 2022; 483 157-168.                  

Injury-induced Erk1/2 signaling tissue-specifically interacts with Ca2+ activity and is necessary for regeneration of spinal cord and skeletal muscle., Levin JB, Borodinsky LN., Cell Calcium. March 1, 2022; 102 102540.                                  

Acute multidrug delivery via a wearable bioreactor facilitates long-term limb regeneration and functional recovery in adult Xenopus laevis., Murugan NJ, Vigran HJ, Miller KA, Golding A, Pham QL, Sperry MM, Rasmussen-Ivey C, Kane AW, Kaplan DL, Levin M., Sci Adv. January 28, 2022; 8 (4): eabj2164.            

Systematic mapping of rRNA 2'-O methylation during frog development and involvement of the methyltransferase Fibrillarin in eye and craniofacial development in Xenopus laevis., Delhermite J, Tafforeau L, Sharma S, Marchand V, Wacheul L, Lattuca R, Desiderio S, Motorin Y, Bellefroid E, Lafontaine DLJ., PLoS Genet. January 18, 2022; 18 (1): e1010012.                                                              

Identification of SCN5a p.C335R Variant in a Large Family with Dilated Cardiomyopathy and Conduction Disease., Sedaghat-Hamedani F, Rebs S, El-Battrawy I, Chasan S, Krause T, Haas J, Zhong R, Liao Z, Xu Q, Zhou X, Akin I, Zitron E, Frey N, Streckfuss-Bömeke K, Kayvanpour E., Int J Mol Sci. November 30, 2021; 22 (23):             

Function of chromatin modifier Hmgn1 during neural crest and craniofacial development., Ihewulezi C, Saint-Jeannet JP., Genesis. October 1, 2021; 59 (10): e23447.              

Huntingtin CAG expansion impairs germ layer patterning in synthetic human 2D gastruloids through polarity defects., Galgoczi S, Ruzo A, Markopoulos C, Yoney A, Phan-Everson T, Li S, Haremaki T, Metzger JJ, Etoc F, Brivanlou AH., Development. October 1, 2021; 148 (19):               

Foxm1 regulates neural progenitor fate during spinal cord regeneration., Pelzer D, Phipps LS, Thuret R, Gallardo-Dodd CJ, Baker SM, Dorey K., EMBO Rep. September 6, 2021; 22 (9): e50932.                        

Sobp modulates the transcriptional activation of Six1 target genes and is required during craniofacial development., Tavares ALP, Jourdeuil K, Neilson KM, Majumdar HD, Moody SA., Development. September 1, 2021; 148 (17):                       

Single-minded 2 is required for left-right asymmetric stomach morphogenesis., Wyatt BH, Amin NM, Bagley K, Wcisel DJ, Dush MK, Yoder JA, Nascone-Yoder NM., Development. September 1, 2021; 148 (17):                 

TGF-β1 signaling is essential for tissue regeneration in the Xenopus tadpole tail., Nakamura M, Yoshida H, Moriyama Y, Kawakita I, Wlizla M, Takebayashi-Suzuki K, Horb ME, Suzuki A., Biochem Biophys Res Commun. August 6, 2021; 565 91-96.          

Molecular mechanisms of hearing loss in Nager syndrome., Maharana SK, Saint-Jeannet JP., Dev Biol. August 1, 2021; 476 200-208.            

Independent pseudogenizations and losses of sox15 during amniote diversification following asymmetric ohnolog evolution., Ogita Y, Tamura K, Mawaribuchi S, Takamatsu N, Ito M., BMC Ecol Evol. June 30, 2021; 21 (1): 134.        

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