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BET activity plays an essential role in control of stem cell attributes in Xenopus. , Huber PB , Rao A, LaBonne C ., Development. July 1, 2024; 151 (13):
Cdx1 and Gsc distinctly regulate the transcription of BMP4 target gene ventx3.2 by directly binding to the proximal promoter region in Xenopus gastrulae. , Goutam RS, Kumar V , Lee U, Kim J ., Mol Cells. April 1, 2024; 47 (4): 100058.
Transmembrane protein 150b attenuates BMP signaling in the Xenopus organizer. , Keum BR, Yeo I, Koo Y, Han W, Choi SC, Kim GH , Han JK ., J Cell Physiol. August 1, 2023; 238 (8): 1850-1866.
Bmp4 Synexpression Gene, Sizzled, Transcription Is Collectively Modulated by Smad1 and Ventx1.1/Ventx2.1 in Early Xenopus Embryos. , Rehman ZU , Tayyaba F, Lee U, Kim J ., Int J Mol Sci. November 1, 2022; 23 (21):
Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions. , Johnson K, Freedman S, Braun R, LaBonne C ., BMC Genomics. October 23, 2022; 23 (1): 723.
The homeodomain transcription factor Ventx2 regulates respiratory progenitor cell number and differentiation timing during Xenopus lung development. , Rankin SA , Rankin SA , Zorn AM ., Dev Growth Differ. September 1, 2022; 64 (7): 347-361.
Foxd4l1.1 Negatively Regulates Chordin Transcription in Neuroectoderm of Xenopus Gastrula. , Kumar V , Goutam RS, Umair Z, Park S, Lee U, Kim J ., Cells. October 17, 2021; 10 (10):
The atypical RNA-binding protein Taf15 regulates dorsoanterior neural development through diverse mechanisms in Xenopus tropicalis. , DeJong CS, Dichmann DS , Exner CRT, Xu Y , Xu Y , Harland RM ., Development. August 1, 2021; 148 (15):
Pinhead antagonizes Admp to promote notochord formation. , Itoh K, Ossipova O, Sokol SY ., iScience. June 25, 2021; 24 (6): 102520.
Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates. , Bright AR, van Genesen S, Li Q , Grasso A, Frölich S, van der Sande M, van Heeringen SJ, Veenstra GJC ., EMBO J. May 3, 2021; 40 (9): e104913.
A temporally resolved transcriptome for developing "Keller" explants of the Xenopus laevis dorsal marginal zone. , Kakebeen AD, Huebner RJ, Shindo A, Kwon K, Kwon T , Wills AE , Wallingford JB ., Dev Dyn. May 1, 2021; 250 (5): 717-731.
Foxd4l1.1 negatively regulates transcription of neural repressor ventx1.1 during neuroectoderm formation in Xenopus embryos. , Kumar S , Kumar S , Umair Z, Kumar V , Kumar S , Lee U, Kim J ., Sci Rep. October 8, 2020; 10 (1): 16780.
Xvent-2 expression in regenerating Xenopus tails. , Pshennikova ES, Voronina AS., Stem Cell Investig. July 20, 2020; 7 13.
The regulatory proteins DSCR6 and Ezh2 oppositely regulate Stat3 transcriptional activity in mesoderm patterning during Xenopus development. , Loreti M, Shi DL , Carron C., J Biol Chem. February 28, 2020; 295 (9): 2724-2735.
Role of dipeptidyl peptidase-4 as a potentiator of activin/nodal signaling pathway. , Park DS, Kim K, Jang M, Choi SC., BMB Rep. December 1, 2018; 51 (12): 636-641.
Xenopus SOX5 enhances myogenic transcription indirectly through transrepression. , Della Gaspera B , Chesneau A, Weill L, Charbonnier F, Chanoine C ., Dev Biol. October 15, 2018; 442 (2): 262-275.
Notch1 is asymmetrically distributed from the beginning of embryogenesis and controls the ventral center. , Castro Colabianchi AM, Revinski DR, Encinas PI, Baez MV, Monti RJ, Rodríguez Abinal M, Kodjabachian L , Franchini LF, López SL ., Development. July 17, 2018; 145 (14):
A gene regulatory network underlying the formation of pre-placodal ectoderm in Xenopus laevis. , Maharana SK , Schlosser G ., BMC Biol. July 16, 2018; 16 (1): 79.
Tbx2 is required for the suppression of mesendoderm during early Xenopus development. , Teegala S , Chauhan R, Lei E, Weinstein DC ., Dev Dyn. July 1, 2018; 247 (7): 903-913.
The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution. , Briggs JA, Weinreb C, Wagner DE, Megason S, Peshkin L , Kirschner MW , Klein AM ., Science. June 1, 2018; 360 (6392):
PAWS1 controls Wnt signalling through association with casein kinase 1α. , Bozatzi P, Dingwell KS, Wu KZ, Cooper F, Cummins TD, Hutchinson LD, Vogt J, Wood NT, Macartney TJ, Varghese J, Gourlay R, Campbell DG, Smith JC , Sapkota GP., EMBO Rep. April 1, 2018; 19 (4):
ADMP controls the size of Spemann's organizer through a network of self-regulating expansion-restriction signals. , Leibovich A, Kot-Leibovich H, Ben-Zvi D, Fainsod A ., BMC Biol. January 22, 2018; 16 (1): 13.
Candidate Heterotaxy Gene FGFR4 Is Essential for Patterning of the Left- Right Organizer in Xenopus. , Sempou E, Lakhani OA, Amalraj S, Khokha MK ., Front Physiol. January 1, 2018; 9 1705.
KDM3A-mediated demethylation of histone H3 lysine 9 facilitates the chromatin binding of Neurog2 during neurogenesis. , Lin H, Zhu X, Chen G, Song L, Gao L, Khand AA, Chen Y , Lin G , Tao Q , Tao Q ., Development. October 15, 2017; 144 (20): 3674-3685.
Lineage commitment of embryonic cells involves MEK1-dependent clearance of pluripotency regulator Ventx2. , Scerbo P , Marchal L, Kodjabachian L ., Elife. June 27, 2017; 6
Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing. , Popov IK, Kwon T , Crossman DK, Crowley MR, Wallingford JB , Chang C ., Dev Biol. June 15, 2017; 426 (2): 429-441.
A catalog of Xenopus tropicalis transcription factors and their regional expression in the early gastrula stage embryo. , Blitz IL , Paraiso KD , Patrushev I , Chiu WTY , Cho KWY , Gilchrist MJ ., Dev Biol. June 15, 2017; 426 (2): 409-417.
Conservatism and variability of gene expression profiles among homeologous transcription factors in Xenopus laevis. , Watanabe M, Yasuoka Y , Mawaribuchi S, Kuretani A, Ito M, Kondo M, Ochi H , Ogino H , Fukui A , Taira M , Kinoshita T., Dev Biol. June 15, 2017; 426 (2): 301-324.
Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula transition. , Wagner G, Singhal N, Nicetto D, Straub T, Kremmer E, Rupp RAW ., PLoS Genet. May 12, 2017; 13 (5): e1006757.
Genomic integration of Wnt/ β-catenin and BMP/Smad1 signaling coordinates foregut and hindgut transcriptional programs. , Stevens ML , Chaturvedi P , Rankin SA , Rankin SA , Macdonald M, Jagannathan S, Yukawa M, Barski A, Zorn AM ., Development. April 1, 2017; 144 (7): 1283-1295.
Tril targets Smad7 for degradation to allow hematopoietic specification in Xenopus embryos. , Green YS, Kwon S, Mimoto MS, Xie Y, Christian JL ., Development. November 1, 2016; 143 (21): 4016-4026.
The proteins of Vent-family and their mRNAs are located in different areas of the tails of Zebrafish and Xenopus embryos. , Pshennikova ES, Voronina AS., Int J Biochem Cell Biol. October 1, 2016; 79 388-392.
Genome-wide view of TGFβ/ Foxh1 regulation of the early mesendoderm program. , Chiu WT , Charney Le R, Blitz IL , Fish MB, Li Y, Biesinger J, Xie X, Cho KW ., Development. December 1, 2014; 141 (23): 4537-47.
In vivo T-box transcription factor profiling reveals joint regulation of embryonic neuromesodermal bipotency. , Gentsch GE , Owens ND, Martin SR, Piccinelli P, Faial T, Trotter MW, Gilchrist MJ , Smith JC ., Cell Rep. September 26, 2013; 4 (6): 1185-96.
Sizzled- tolloid interactions maintain foregut progenitors by regulating fibronectin-dependent BMP signaling. , Kenny AP , Rankin SA , Rankin SA , Allbee AW, Prewitt AR, Zhang Z , Tabangin ME, Shifley ET , Louza MP , Zorn AM ., Dev Cell. August 14, 2012; 23 (2): 292-304.
Ventx factors function as Nanog-like guardians of developmental potential in Xenopus. , Scerbo P , Girardot F , Vivien C, Markov GV, Luxardi G , Demeneix B , Kodjabachian L , Coen L., PLoS One. January 1, 2012; 7 (5): e36855.
Negative feedback in the bone morphogenetic protein 4 ( BMP4) synexpression group governs its dynamic signaling range and canalizes development. , Paulsen M, Legewie S, Eils R, Karaulanov E, Niehrs C ., Proc Natl Acad Sci U S A. June 21, 2011; 108 (25): 10202-7.
VentX trans-activates p53 and p16ink4a to regulate cellular senescence. , Wu X, Gao H, Ke W, Hager M, Xiao S, Freeman MR, Zhu Z., J Biol Chem. April 8, 2011; 286 (14): 12693-701.
Conservation and diversification of an ancestral chordate gene regulatory network for dorsoventral patterning. , Kozmikova I, Smolikova J, Vlcek C, Kozmik Z., PLoS One. February 3, 2011; 6 (2): e14650.
Xmc mediates Xctr1-independent morphogenesis in Xenopus laevis. , Haremaki T , Weinstein DC ., Dev Dyn. September 1, 2009; 238 (9): 2382-7.
The POU factor Oct-25 regulates the Xvent-2B gene and counteracts terminal differentiation in Xenopus embryos. , Cao Y , Cao Y , Knöchel S , Donow C, Miethe J, Kaufmann E, Knöchel W ., J Biol Chem. October 15, 2004; 279 (42): 43735-43.
Repression of the vertebrate organizer by Wnt8 is mediated by Vent and Vox. , Ramel MC, Lekven AC., Development. August 1, 2004; 131 (16): 3991-4000.
Xenopus tropicalis nodal-related gene 3 regulates BMP signaling: an essential role for the pro-region. , Haramoto Y , Tanegashima K , Onuma Y , Takahashi S , Sekizaki H, Asashima M ., Dev Biol. January 1, 2004; 265 (1): 155-68.
PP2A:B56epsilon is required for Wnt/beta-catenin signaling during embryonic development. , Yang J , Wu J , Tan C, Klein PS ., Development. December 1, 2003; 130 (23): 5569-78.
Transcriptional regulation of Xbr-1a/ Xvent-2 homeobox gene: analysis of its promoter region. , Lee HS , Lee HS , Park MJ, Lee SY, Hwang YS, Lee H , Roh DH, Kim JI , Park JB , Lee JY , Lee JY , Kung HF, Kim J ., Biochem Biophys Res Commun. November 15, 2002; 298 (5): 815-23.
Bone morphogenetic protein-4-induced activation of Xretpos is mediated by Smads and Olf-1/EBF associated zinc finger ( OAZ). , Shim S , Bae N, Han JK ., Nucleic Acids Res. July 15, 2002; 30 (14): 3107-17.
Cooperative interaction of Xvent-2 and GATA-2 in the activation of the ventral homeobox gene Xvent-1B. , Friedle H, Knöchel W ., J Biol Chem. June 28, 2002; 277 (26): 23872-81.
A study of mesoderm patterning through the analysis of the regulation of Xmyf-5 expression. , Polli M, Amaya E ., Development. June 1, 2002; 129 (12): 2917-27.
Antimorphic PV.1 causes secondary axis by inducing ectopic organizer. , Hwang YS, Seo JJ, Cha SW , Lee HS , Lee HS , Lee SY, Roh DH, Kung Hf HF, Kim J , Ja Park M., Biochem Biophys Res Commun. April 12, 2002; 292 (4): 1081-6.
Autoregulation of Xvent-2B; direct interaction and functional cooperation of Xvent-2 and Smad1. , Henningfeld KA , Friedle H, Rastegar S, Knöchel W ., J Biol Chem. January 18, 2002; 277 (3): 2097-103.