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Summary Expression Phenotypes Gene Literature (66) GO Terms (6) Nucleotides (169) Proteins (53) Interactants (927) Wiki
XB-GENEPAGE-482730

Papers associated with hoxd1



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14 paper(s) referencing morpholinos

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Retinoic acid control of pax8 during renal specification of Xenopus pronephros involves hox and meis3., Durant-Vesga J, Suzuki N, Ochi H, Le Bouffant R, Eschstruth A, Ogino H, Umbhauer M, Riou JF., Dev Biol. January 1, 2023; 493 17-28.

Pinhead signaling regulates mesoderm heterogeneity via the FGF receptor-dependent pathway., Ossipova O, Itoh K, Radu A, Ezan J, Sokol SY., Development. September 11, 2020; 147 (17):                 

Chromatin accessibility and histone acetylation in the regulation of competence in early development., Esmaeili M, Blythe SA, Tobias JW, Zhang K, Yang J, Klein PS., Dev Biol. June 1, 2020; 462 (1): 20-35.                

Modeling Bainbridge-Ropers Syndrome in Xenopus laevis Embryos., Lichtig H, Artamonov A, Polevoy H, Reid CD, Bielas SL, Frank D., Front Physiol. February 18, 2020; 11 75.                    

Pinhead signaling regulates mesoderm heterogeneity via FGF receptor-dependent pathway., Ossipova O, Itoh K, Radu A, Ezan J, Sokol SY., Development. January 1, 2020;                                       

PTK7 proteolytic fragment proteins function during early Xenopus development., Lichtig H, Cohen Y, Bin-Nun N, Golubkov V, Frank D., Dev Biol. September 1, 2019; 453 (1): 48-55.        

What are the roles of retinoids, other morphogens, and Hox genes in setting up the vertebrate body axis?, Durston AJ., Genesis. July 1, 2019; 57 (7-8): e23296.            

De novo transcription of multiple Hox cluster genes takes place simultaneously in early Xenopus tropicalis embryos., Kondo M, Matsuo M, Igarashi K, Haramoto Y, Yamamoto T, Yasuoka Y, Taira M., Biol Open. March 4, 2019; 8 (3):                                   

Two Tier Hox Collinearity Mediates Vertebrate Axial Patterning., Durston AJ., Front Cell Dev Biol. June 26, 2018; 6 102.        

Retinoic acid-induced expression of Hnf1b and Fzd4 is required for pancreas development in Xenopus laevis., Gere-Becker MB, Pommerenke C, Lingner T, Pieler T., Development. June 8, 2018; 145 (12):                                   

Comprehensive analyses of hox gene expression in Xenopus laevis embryos and adult tissues., Kondo M, Yamamoto T, Takahashi S, Taira M., Dev Growth Differ. August 1, 2017; 59 (6): 526-539.                                

The phosphatase Pgam5 antagonizes Wnt/β-Catenin signaling in embryonic anterior-posterior axis patterning., Rauschenberger V, Bernkopf DB, Krenn S, Jalal K, Heller J, Behrens J, Gentzel M, Schambony A., Development. June 15, 2017; 144 (12): 2234-2247.                                      

Collinear Hox-Hox interactions are involved in patterning the vertebrate anteroposterior (A-P) axis., Zhu K, Spaink HP, Durston AJ., PLoS One. April 11, 2017; 12 (4): e0175287.                

Genome-wide analysis of canonical Wnt target gene regulation in Xenopus tropicalis challenges β-catenin paradigm., Nakamura Y, Hoppler S., Genesis. January 1, 2017; 55 (1-2):         

Tissue- and stage-specific Wnt target gene expression is controlled subsequent to β-catenin recruitment to cis-regulatory modules., Nakamura Y, de Paiva Alves E, Veenstra GJ, Hoppler S., Development. June 1, 2016; 143 (11): 1914-25.            

Noggin4 is a long-range inhibitor of Wnt8 signalling that regulates head development in Xenopus laevis., Eroshkin FM, Nesterenko AM, Borodulin AV, Martynova NY, Ermakova GV, Gyoeva FK, Orlov EE, Belogurov AA, Lukyanov KA, Bayramov AV, Zaraisky AG., Sci Rep. January 22, 2016; 6 23049.                                                            

Specification of anteroposterior axis by combinatorial signaling during Xenopus development., Carron C, Shi DL., Wiley Interdiscip Rev Dev Biol. January 1, 2016; 5 (2): 150-68.            

A time space translation hypothesis for vertebrate axial patterning., Durston AJ, Zhu K., Semin Cell Dev Biol. June 1, 2015; 42 86-93.  

Heat shock 70-kDa protein 5 (Hspa5) is essential for pronephros formation by mediating retinoic acid signaling., Shi W, Xu G, Wang C, Wang C, Wang C, Sperber SM, Chen Y, Chen Y, Zhou Q, Deng Y, Zhao H., J Biol Chem. January 2, 2015; 290 (1): 577-89.                        

Vertical signalling involves transmission of Hox information from gastrula mesoderm to neurectoderm., Bardine N, Lamers G, Wacker S, Donow C, Knoechel W, Durston A., PLoS One. December 1, 2014; 9 (12): e115208.          

Two different network topologies yield bistability in models of mesoderm and anterior mesendoderm specification in amphibians., Brown LE, King JR, Loose M., J Theor Biol. July 21, 2014; 353 67-77.                    

Molecular insights into the origin of the Hox-TALE patterning system., Hudry B, Thomas-Chollier M, Volovik Y, Duffraisse M, Dard A, Frank D, Technau U, Merabet S., Elife. March 18, 2014; 3 e01939.                                    

PTK7 modulates Wnt signaling activity via LRP6., Bin-Nun N, Lichtig H, Malyarova A, Levy M, Elias S, Frank D., Development. January 1, 2014; 141 (2): 410-21.              

Zygotic expression of Exostosin1 (Ext1) is required for BMP signaling and establishment of dorsal-ventral pattern in Xenopus., Shieh YE, Wells DE, Sater AK., Int J Dev Biol. January 1, 2014; 58 (1): 27-34.          

Dhrs3 protein attenuates retinoic acid signaling and is required for early embryonic patterning., Kam RK, Shi W, Chan SO, Chen Y, Xu G, Lau CB, Fung KP, Chan WY, Zhao H., J Biol Chem. November 1, 2013; 288 (44): 31477-87.                    

Time space translation: a hox mechanism for vertebrate a-p patterning., Durston A, Wacker S, Bardine N, Jansen H., Curr Genomics. June 1, 2012; 13 (4): 300-7.          

Transient expression of Ngn3 in Xenopus endoderm promotes early and ectopic development of pancreatic beta and delta cells., Oropeza D, Horb M., Genesis. March 1, 2012; 50 (3): 271-85.                        

Analyzing the function of a hox gene: an evolutionary approach., Michaut L, Jansen HJ, Bardine N, Durston AJ, Gehring WJ., Dev Growth Differ. December 1, 2011; 53 (9): 982-93.                  

Transcriptomic analysis of avian digits reveals conserved and derived digit identities in birds., Wang Z, Young RL, Xue H, Wagner GP., Nature. September 4, 2011; 477 (7366): 583-6.

Focal adhesion kinase protein regulates Wnt3a gene expression to control cell fate specification in the developing neural plate., Fonar Y, Gutkovich YE, Root H, Malyarova A, Aamar E, Golubovskaya VM, Elias S, Elkouby YM, Frank D., Mol Biol Cell. July 1, 2011; 22 (13): 2409-21.                  

XMeis3 is necessary for mesodermal Hox gene expression and function., In der Rieden PM, Jansen HJ, Durston AJ., PLoS One. March 9, 2011; 6 (3): e18010.            

An evolving NGF-Hoxd1 signaling pathway mediates development of divergent neural circuits in vertebrates., Guo T, Mandai K, Condie BG, Wickramasinghe SR, Capecchi MR, Ginty DD., Nat Neurosci. January 1, 2011; 14 (1): 31-6.          

Hox collinearity - a new perspective., Durston AJ, Jansen HJ, In der Rieden P, Hooiveld MH., Int J Dev Biol. January 1, 2011; 55 (10-12): 899-908.  

Anterior neural development requires Del1, a matrix-associated protein that attenuates canonical Wnt signaling via the Ror2 pathway., Takai A, Inomata H, Arakawa A, Yakura R, Matsuo-Takasaki M, Sasai Y., Development. October 1, 2010; 137 (19): 3293-302.            

Mesodermal Wnt signaling organizes the neural plate via Meis3., Elkouby YM, Elias S, Casey ES, Blythe SA, Tsabar N, Klein PS, Root H, Liu KJ, Liu KJ, Frank D., Development. May 1, 2010; 137 (9): 1531-41.        

Xenopus Meis3 protein lies at a nexus downstream to Zic1 and Pax3 proteins, regulating multiple cell-fates during early nervous system development., Gutkovich YE, Ofir R, Elkouby YM, Dibner C, Gefen A, Elias S, Frank D., Dev Biol. February 1, 2010; 338 (1): 50-62.                  

Xwnt8 directly initiates expression of labial Hox genes., In der Rieden PM, Vilaspasa FL, Durston AJ., Dev Dyn. January 1, 2010; 239 (1): 126-39.          

Identification of hoxb1b downstream genes: hoxb1b as a regulatory factor controlling transcriptional networks and cell movement during zebrafish gastrulation., van den Akker WM, Durston AJ, Spaink HP., Int J Dev Biol. January 1, 2010; 54 (1): 55-62.

Retinoid signalling is required for information transfer from mesoderm to neuroectoderm during gastrulation., Lloret-Vilaspasa F, Jansen HJ, de Roos K, Chandraratna RA, Zile MH, Stern CD, Durston AJ., Int J Dev Biol. January 1, 2010; 54 (4): 599-608.                

Direct control of Hoxd1 and Irx3 expression by Wnt/beta-catenin signaling during anteroposterior patterning of the neural axis in Xenopus., Janssens S, Denayer T, Deroo T, Van Roy F, Vleminckx K, Vleminckx K., Int J Dev Biol. January 1, 2010; 54 (10): 1435-42.    

Dazap2 is required for FGF-mediated posterior neural patterning, independent of Wnt and Cdx function., Roche DD, Liu KJ, Harland RM, Monsoro-Burq AH., Dev Biol. September 1, 2009; 333 (1): 26-36.                              

The RNA-binding protein Mex3b has a fine-tuning system for mRNA regulation in early Xenopus development., Takada H, Kawana T, Ito Y, Kikuno RF, Mamada H, Araki T, Koga H, Asashima M, Taira M., Development. July 1, 2009; 136 (14): 2413-22.                    

In vitro organogenesis from undifferentiated cells in Xenopus., Asashima M, Ito Y, Chan T, Michiue T, Nakanishi M, Suzuki K, Hitachi K, Okabayashi K, Kondow A, Ariizumi T., Dev Dyn. June 1, 2009; 238 (6): 1309-20.                      

Retinol dehydrogenase 10 is a feedback regulator of retinoic acid signalling during axis formation and patterning of the central nervous system., Strate I, Min TH, Iliev D, Pera EM., Development. February 1, 2009; 136 (3): 461-72.                

Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides., Rana AA, Collart C, Gilchrist MJ, Smith JC., PLoS Genet. November 17, 2006; 2 (11): e193.                                    

Kermit 2/XGIPC, an IGF1 receptor interacting protein, is required for IGF signaling in Xenopus eye development., Wu J, O'Donnell M, Gitler AD, Klein PS., Development. September 1, 2006; 133 (18): 3651-60.          

FGF8 spliceforms mediate early mesoderm and posterior neural tissue formation in Xenopus., Fletcher RB, Baker JC, Harland RM., Development. May 1, 2006; 133 (9): 1703-14.            

Interaction between X-Delta-2 and Hox genes regulates segmentation and patterning of the anteroposterior axis., Peres JN, McNulty CL, Durston AJ., Mech Dev. April 1, 2006; 123 (4): 321-33.                          

Knockdown of the complete Hox paralogous group 1 leads to dramatic hindbrain and neural crest defects., McNulty CL, Peres JN, Bardine N, van den Akker WM, Durston AJ., Development. June 1, 2005; 132 (12): 2861-71.                    

Identification of novel genes affecting mesoderm formation and morphogenesis through an enhanced large scale functional screen in Xenopus., Chen JA, Voigt J, Gilchrist M, Papalopulu N, Amaya E., Mech Dev. March 1, 2005; 122 (3): 307-31.                                                                                                                      

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