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Summary Expression Phenotypes Gene Literature (521) GO Terms (27) Nucleotides (552) Proteins (48) Interactants (2240) Wiki
XB--484552

Papers associated with sox2



Limit to papers also referencing gene:
147 paper(s) referencing morpholinos

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referenced by:

Development of subdomains in the medial pallium of Xenopus laevis and Trachemys scripta: Insights into the anamniote-amniote transition., Jiménez S, Moreno N., Front Neuroanat. 16 1039081.                      

Production and characterization of monoclonal antibodies to xenopus proteins., Horr B, Kurtz R, Pandey A, Hoffstrom BG, Schock E, LaBonne C, Alfandari D, Alfandari D., Development. February 14, 2023;                 

Retinoic acid control of pax8 during renal specification of Xenopus pronephros involves hox and meis3., Durant-Vesga J, Suzuki N, Ochi H, Le Bouffant R, Eschstruth A, Ogino H, Umbhauer M, Riou JF., Dev Biol. January 1, 2023; 493 17-28.

Membrane potential drives the exit from pluripotency and cell fate commitment via calcium and mTOR., Sempou E, Kostiuk V, Zhu J, Cecilia Guerra M, Tyan L, Hwang W, Camacho-Aguilar E, Caplan MJ, Zenisek D, Warmflash A, Owens NDL, Khokha MK., Nat Commun. November 5, 2022; 13 (1): 6681.                                            

Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions., Johnson K, Freedman S, Braun R, LaBonne C., BMC Genomics. October 23, 2022; 23 (1): 723.                                  

The homeodomain transcription factor Ventx2 regulates respiratory progenitor cell number and differentiation timing during Xenopus lung development., Rankin SA, Rankin SA, Zorn AM., Dev Growth Differ. September 1, 2022; 64 (7): 347-361.            

Functions of block of proliferation 1 during anterior development in Xenopus laevis., Gärtner C, Meßmer A, Dietmann P, Kühl M, Kühl SJ., PLoS One. August 2, 2022; 17 (8): e0273507.                        

Normal Table of Xenopus development: a new graphical resource., Zahn N, James-Zorn C, Ponferrada VG, Adams DS, Grzymkowski J, Buchholz DR, Nascone-Yoder NM, Horb M, Moody SA, Vize PD, Zorn AM., Development. July 15, 2022; 149 (14):                         

Identification and validation of candidate risk genes in endocytic vesicular trafficking associated with esophageal atresia and tracheoesophageal fistulas., Zhong G, Ahimaz P, Edwards NA, Hagen JJ, Faure C, Lu Q, Kingma P, Middlesworth W, Khlevner J, El Fiky M, Schindel D, Fialkowski E, Kashyap A, Forlenza S, Kenny AP, Zorn AM, Shen Y, Chung WK., HGG Adv. July 14, 2022; 3 (3): 100107.        

HMCES modulates the transcriptional regulation of nodal/activin and BMP signaling in mESCs., Liang T, Bai J, Zhou W, Lin H, Ma S, Zhu X, Tao Q, Xi Q., Cell Rep. July 12, 2022; 40 (2): 111038.                              

Evo-Devo of Urbilateria and its larval forms., De Robertis EM, Tejeda-Muñoz N., Dev Biol. July 1, 2022; 487 10-20.        

FGF/MAPK/Ets signaling in Xenopus ectoderm contributes to neural induction and patterning in an autonomous and paracrine manner, respectively., Hongo I, Okamoto H., Cells Dev. June 1, 2022; 170 203769.

Cilia-localized GID/CTLH ubiquitin ligase complex regulates protein homeostasis of sonic hedgehog signaling components., Hantel F, Liu H, Fechtner L, Neuhaus H, Ding J, Arlt D, Walentek P, Villavicencio-Lorini P, Gerhardt C, Hollemann T, Pfirrmann T., J Cell Sci. May 1, 2022; 135 (9):                                     

Lysosomes are required for early dorsal signaling in the Xenopus embryo., Tejeda-Muñoz N, De Robertis EM., Proc Natl Acad Sci U S A. April 26, 2022; 119 (17): e2201008119.                          

Hif1α and Wnt are required for posterior gene expression during Xenopus tropicalis tail regeneration., Patel JH, Schattinger PA, Takayoshi EE, Wills AE., Dev Biol. March 1, 2022; 483 157-168.                  

Injury-induced Erk1/2 signaling tissue-specifically interacts with Ca2+ activity and is necessary for regeneration of spinal cord and skeletal muscle., Levin JB, Borodinsky LN., Cell Calcium. March 1, 2022; 102 102540.                                  

Acute multidrug delivery via a wearable bioreactor facilitates long-term limb regeneration and functional recovery in adult Xenopus laevis., Murugan NJ, Vigran HJ, Miller KA, Golding A, Pham QL, Sperry MM, Rasmussen-Ivey C, Kane AW, Kaplan DL, Levin M., Sci Adv. January 28, 2022; 8 (4): eabj2164.            

Systematic mapping of rRNA 2'-O methylation during frog development and involvement of the methyltransferase Fibrillarin in eye and craniofacial development in Xenopus laevis., Delhermite J, Tafforeau L, Sharma S, Marchand V, Wacheul L, Lattuca R, Desiderio S, Motorin Y, Bellefroid E, Lafontaine DLJ., PLoS Genet. January 18, 2022; 18 (1): e1010012.                                                              

Function of chromatin modifier Hmgn1 during neural crest and craniofacial development., Ihewulezi C, Saint-Jeannet JP., Genesis. October 1, 2021; 59 (10): e23447.              

Huntingtin CAG expansion impairs germ layer patterning in synthetic human 2D gastruloids through polarity defects., Galgoczi S, Ruzo A, Markopoulos C, Yoney A, Phan-Everson T, Li S, Haremaki T, Metzger JJ, Etoc F, Brivanlou AH., Development. October 1, 2021; 148 (19):               

Otic Neurogenesis in Xenopus laevis: Proliferation, Differentiation, and the Role of Eya1., Almasoudi SH, Schlosser G., Front Neuroanat. September 20, 2021; 15 722374.                                                    

Foxm1 regulates neural progenitor fate during spinal cord regeneration., Pelzer D, Phipps LS, Thuret R, Gallardo-Dodd CJ, Baker SM, Dorey K., EMBO Rep. September 6, 2021; 22 (9): e50932.                        

Sobp modulates the transcriptional activation of Six1 target genes and is required during craniofacial development., Tavares ALP, Jourdeuil K, Neilson KM, Majumdar HD, Moody SA., Development. September 1, 2021; 148 (17):                       

Single-minded 2 is required for left-right asymmetric stomach morphogenesis., Wyatt BH, Amin NM, Bagley K, Wcisel DJ, Dush MK, Yoder JA, Nascone-Yoder NM., Development. September 1, 2021; 148 (17):                 

TGF-β1 signaling is essential for tissue regeneration in the Xenopus tadpole tail., Nakamura M, Yoshida H, Moriyama Y, Kawakita I, Wlizla M, Takebayashi-Suzuki K, Horb ME, Suzuki A, Suzuki A., Biochem Biophys Res Commun. August 6, 2021; 565 91-96.          

Molecular mechanisms of hearing loss in Nager syndrome., Maharana SK, Saint-Jeannet JP., Dev Biol. August 1, 2021; 476 200-208.            

Independent pseudogenizations and losses of sox15 during amniote diversification following asymmetric ohnolog evolution., Ogita Y, Tamura K, Mawaribuchi S, Takamatsu N, Ito M., BMC Ecol Evol. June 30, 2021; 21 (1): 134.        

BMP signaling is enhanced intracellularly by FHL3 controlling WNT-dependent spatiotemporal emergence of the neural crest., Alkobtawi M, Pla P, Monsoro-Burq AH., Cell Rep. June 22, 2021; 35 (12): 109289.                        

The cytokine FAM3B/PANDER is an FGFR ligand that promotes posterior development in Xenopus., Zhang F, Zhu X, Wang P, He Q, Huang H, Zheng T, Li Y, Jia H, Xu L, Zhao H, Colozza G, Tao Q, De Robertis EM, Ding Y., Proc Natl Acad Sci U S A. May 18, 2021; 118 (20):           

Kindlin2 regulates neural crest specification via integrin-independent regulation of the FGF signaling pathway., Wang H, Wang C, Wang C, Wang C, Long Q, Zhang Y, Wang M, Liu J, Qi X, Cai D, Lu G, Sun J, Yao YG, Chan WY, Chan WY, Deng Y, Zhao H., Development. May 15, 2021; 148 (10):                                           

Pinhead antagonizes Admp to promote notochord formation., Itoh K, Ossipova O, Sokol SY., iScience. May 7, 2021; 24 (6): 102520.                            

Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., Bright AR, van Genesen S, Li Q, Grasso A, Frölich S, van der Sande M, van Heeringen SJ, Veenstra GJC., EMBO J. May 3, 2021; 40 (9): e104913.                        

Segregation of brain and organizer precursors is differentially regulated by Nodal signaling at blastula stage., Castro Colabianchi AM, Tavella MB, Boyadjián López LE, Rubinstein M, Franchini LF, López SL., Biol Open. February 25, 2021; 10 (2):                 

Retinoic acid production, regulation and containment through Zic1, Pitx2c and Cyp26c1 control cranial placode specification., Dubey A, Yu J, Liu T, Kane MA, Saint-Jeannet JP., Development. February 16, 2021; 148 (4):


Cellular response to spinal cord injury in regenerative and non-regenerative stages in Xenopus laevis., Edwards-Faret G, González-Pinto K, Cebrián-Silla A, Peñailillo J, García-Verdugo JM, Larraín J., Neural Dev. February 2, 2021; 16 (1): 2.                              

Establishing embryonic territories in the context of Wnt signaling., Velloso I, Maia LA, Amado NG, Reis AH, He X, Abreu JG., Int J Dev Biol. January 1, 2021; 65 (4-5-6): 227-233.      

Elucidating the framework for specification and determination of the embryonic retina., Louie SH, Fisher M, Grainger RM., Exp Cell Res. December 15, 2020; 397 (2): 112316.

Generation of a FOXH1 homozygous knockout human embryonic stem cell line by CRISPR/Cas9 system., Zhang T, Huang W, Xue X., Stem Cell Res. December 10, 2020; 50 102121.  

Wnt-inducible Lrp6-APEX2 interacting proteins identify ESCRT machinery and Trk-fused gene as components of the Wnt signaling pathway., Colozza G, Jami-Alahmadi Y, Dsouza A, Tejeda-Muñoz N, Albrecht LV, Sosa EA, Wohlschlegel JA, De Robertis EM., Sci Rep. December 9, 2020; 10 (1): 21555.            

Mcrs1 interacts with Six1 to influence early craniofacial and otic development., Neilson KM, Keer S, Bousquet N, Macrorie O, Majumdar HD, Kenyon KL, Alfandari D, Alfandari D, Moody SA., Dev Biol. November 1, 2020; 467 (1-2): 39-50.                  

Dynamic expression of MMP28 during cranial morphogenesis., Gouignard N, Gouignard N, Theveneau E, Saint-Jeannet JP., Philos Trans R Soc Lond B Biol Sci. October 12, 2020; 375 (1809): 20190559.

Amphibian thalamic nuclear organization during larval development and in the adult frog Xenopus laevis: Genoarchitecture and hodological analysis., Morona R, Bandín S, López JM, Moreno N, González A., J Comp Neurol. October 1, 2020; 528 (14): 2361-2403.                                                                

TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis., Chen M, Amado N, Tan J, Reis A, Ge M, Abreu JG, He X., Elife. September 14, 2020; 9                                                                                           

Maximizing CRISPR/Cas9 phenotype penetrance applying predictive modeling of editing outcomes in Xenopus and zebrafish embryos., Naert T, Tulkens D, Edwards NA, Carron M, Shaidani NI, Wlizla M, Boel A, Demuynck S, Horb ME, Coucke P, Willaert A, Zorn AM, Vleminckx K, Vleminckx K., Sci Rep. September 4, 2020; 10 (1): 14662.                      

Apcdd1 is a dual BMP/Wnt inhibitor in the developing nervous system and skin., Vonica A, Bhat N, Phan K, Guo J, Iancu L, Weber JA, Karger A, Cain JW, Wang ECE, DeStefano GM, O'Donnell-Luria AH, Christiano AM, Riley B, Butler SJ, Luria V., Dev Biol. August 1, 2020; 464 (1): 71-87.      

The transcription factor Hypermethylated in Cancer 1 (Hic1) regulates neural crest migration via interaction with Wnt signaling., Ray H, Chang C., Dev Biol. July 15, 2020; 463 (2): 169-181.                

The Stemness Gene Mex3A Is a Key Regulator of Neuroblast Proliferation During Neurogenesis., Naef V, De Sarlo M, Testa G, Corsinovi D, Azzarelli R, Borello U, Ori M., Front Cell Dev Biol. July 14, 2020; 8 549533.            

Dach1 regulates neural crest migration during embryonic development., Kim YK, Lee H, Ismail T, Kim Y, Lee HS., Biochem Biophys Res Commun. July 5, 2020; 527 (4): 896-901.        

Long-term association of a transcription factor with its chromatin binding site can stabilize gene expression and cell fate commitment., Gurdon JB, Javed K, Vodnala M, Garrett N., Proc Natl Acad Sci U S A. June 30, 2020; 117 (26): 15075-15084.            

Natural size variation among embryos leads to the corresponding scaling in gene expression., Leibovich A, Edri T, Klein SL, Moody SA, Fainsod A., Dev Biol. June 15, 2020; 462 (2): 165-179.                    

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