Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (577) GO Terms (106) Nucleotides (552) Proteins (48) Interactants (2509) Wiki
XB--484552

Papers associated with sox2



???displayGene.coCitedPapers???
147 ???displayGene.morpholinoPapers???

???pagination.result.count???

???pagination.result.page??? 1 2 3 4 5 6 7 8 9 10 11 ???pagination.result.next???

Sort Newest To Oldest Sort Oldest To Newest

referenced by:

Development of subdomains in the medial pallium of Xenopus laevis and Trachemys scripta: Insights into the anamniote-amniote transition., Jiménez S, Moreno N., Front Neuroanat. 16 1039081.   


Disrupted endosomal trafficking of the Vangl-Celsr polarity complex underlies congenital anomalies in Xenopus trachea-esophageal morphogenesis., Edwards NA, Rankin SA, Kashyap A, Warren A, Agricola ZN, Kenny AP, Kofron M, Shen Y, Chung WK, Zorn AM., Dev Cell. May 21, 2025;   


Krüppel-like factors play essential roles in regulating pluripotency and the formation of neural crest stem cells., Rigney S, York JR, LaBonne C., Development. May 1, 2025; 152 (9):   


Musashi-dependent mRNA translational activation is mediated through association with the Scd6/Like-sm family member, LSM14B., Bronson K, Banik J, Lim J, Reddick MM, Hardy L, Childs GV, MacNicol MC, MacNicol AM., Sci Rep. April 10, 2025; 15 (1): 12363.   


Deletion of sf3b4 causes splicing defects and gene dysregulation that disrupt craniofacial development and survival., Griffin C, Coppenrath K, Khan D, Lin Z, Horb M, Saint-Jeannet JP., Dis Model Mech. March 1, 2025; 18 (3):   


Adeno-associated viral tools to trace neural development and connectivity across amphibians., Jaeger ECB, Vijatovic D, Deryckere A, Zorin N, Nguyen AL, Ivanian G, Woych J, Arnold RC, Gurrola AO, Shvartsman A, Barbieri F, Toma FA, Cline HT, Shay TF, Kelley DB, Yamaguchi A, Shein-Idelson M, Tosches MA, Sweeney LB., Dev Cell. November 25, 2024;   


Histological and gene-expression analyses of pyloric sphincter formation during stomach metamorphosis in Xenopus laevis., Nagura K, Ikeda T, Hasebe T, Satou-Kobayashi Y, Udagawa S, Shigenobu S, Ishizuya-Oka A, Taira M., Dev Biol. September 21, 2024; 517 100-116.

Temporal Transcriptomic Profiling of the Developing Xenopus laevis Eye., Hack SJ, Petereit J, Tseng KA., Cells. August 21, 2024; 13 (16):   


Sox21 homeologs autoregulate expression levels to control progression through neurogenesis., Damuth DL, Cunningham DD, Silva EM., Genesis. August 1, 2024; 62 (4): e23612.   


SoxB1 transcription factors are essential for initiating and maintaining neural plate border gene expression., Schock EN, York JR, Li AP, Tu AY, LaBonne C., Development. July 15, 2024; 151 (14):   


Molecular analysis of a self-organizing signaling pathway for Xenopus axial patterning from egg to tailbud., Azbazdar Y, De Robertis EM., Proc Natl Acad Sci U S A. July 9, 2024; 121 (28): e2408346121.   


Differential cellular stiffness across tissues that contribute to Xenopus neural tube closure., Suzuki M, Yasue N, Ueno N., Dev Growth Differ. June 26, 2024; 66 (5): 320-328.   


Interactions between genistein and Wnt pathway in colon adenocarcinoma and early embryos., Azbazdar Y, Sosa EA, Monka J, Kurmangaliyev YZ, Tejeda-Muñoz N., Heliyon. June 15, 2024; 10 (11): e32243.   


Na,K-ATPase activity promotes macropinocytosis in colon cancer via Wnt signaling., Tejeda-Muñoz N, Azbazdar Y, Sosa EA, Monka J, Wei PS, Binder G, Mei KC, Kurmangaliyev YZ, De Robertis EM., Biol Open. May 15, 2024; 13 (5):   


A time-resolved single-cell roadmap of the logic driving anterior neural crest diversification from neural border to migration stages., Kotov A, Seal S, Alkobtawi M, Kappès V, Ruiz SM, Arbès H, Harland RM, Peshkin L, Monsoro-Burq AH., Proc Natl Acad Sci U S A. May 7, 2024; 121 (19): e2311685121.   


Using Xenopus to discover new candidate genes involved in BOR and other congenital hearing loss syndromes., Neal SJ, Rajasekaran A, Jusić N, Taylor L, Read M, Alfandari D, Alfandari D, Pignoni F, Moody SA., J Exp Zool B Mol Dev Evol. May 1, 2024; 342 (3): 212-240.   


Brain enlargement with rostral bias in larvae from a spontaneously occurring female variant line of Xenopus; role of aberrant embryonic Wnt/β-catenin signaling., Hongo I, Yamaguchi C, Okamoto H., Cells Dev. April 3, 2024; 203918.   


Deterministic nuclear reprogramming of mammalian nuclei to a totipotency-like state by Amphibian meiotic oocytes for stem cell therapy in humans., Wen MH, Barbosa Triana H, Butler R, Hu HW, Dai YH, Lawrence N, Hong JJ, Garrett N, Jones-Green R, Rawlins EL, Dong Z, Koziol MJ, Gurdon JB., Biol Open. March 1, 2024; 13 (3):   


Maternal and zygotic contributions to H3K4me1 chromatin marking during germ layer formation., Paraiso KD, Blitz IL, Cho KWY., Dev Biol. February 15, 2024; 518 8-19.

Cell lineage-guided mass spectrometry reveals increased energy metabolism and reactive oxygen species in the vertebrate organizer., Baxi AB, Li J, Quach VM, Pade LR, Moody SA, Nemes P., Proc Natl Acad Sci U S A. February 6, 2024; 121 (6): e2311625121.   


A CRISPR-Cas9-mediated versatile method for targeted integration of a fluorescent protein gene to visualize endogenous gene expression in Xenopus laevis., Mochii M, Akizuki K, Ossaka H, Kagawa N, Umesono Y, Suzuki KT., Dev Biol. February 1, 2024; 506 42-51.   


ZSWIM4 regulates embryonic patterning and BMP signaling by promoting nuclear Smad1 degradation., Wang C, Liu Z, Zeng Y, Zhou L, Long Q, Hassan IU, Zhang Y, Qi X, Cai D, Mao B, Lu G, Sun J, Yao Y, Deng Y, Zhao Q, Feng B, Zhou Q, Chan WY, Zhao H., EMBO Rep. February 1, 2024; 25 (2): 646-671.   


In vitro modeling of cranial placode differentiation: Recent advances, challenges, and perspectives., Griffin C, Saint-Jeannet JP., Dev Biol. February 1, 2024; 506 20-30.

Deciphering the Calcium Code: A Review of Calcium Activity Analysis Methods Employed to Identify Meaningful Activity in Early Neural Development., Paudel S, Yue M, Nalamalapu R, Saha MS., Biomolecules. January 22, 2024; 14 (1):   


BRCA1 and ELK-1 regulate neural progenitor cell fate in the optic tectum in response to visual experience in Xenopus laevis tadpoles., Huang LC, McKeown CR, He HY, Ta AC, Cline HT., Proc Natl Acad Sci U S A. January 16, 2024; 121 (3): e2316542121.   


Xenopus as a model system for studying pigmentation and pigmentary disorders., El Mir J, Nasrallah A, Thézé N, Cario M, Fayyad-Kazan H, Thiébaud P, Rezvani HR., Pigment Cell Melanoma Res. January 7, 2024; 38 (1): e13178.   


Enhancement of neural crest formation by mechanical force in Xenopus development., Kaneshima T, Ogawa M, Yamamoto T, Tsuboyama Y, Miyata Y, Kotani T, Okajima T, Michiue T., Int J Dev Biol. January 1, 2024; 68 (1): 25-37.   


Head organizer: Cerberus and IGF cooperate in brain induction in Xenopus embryos., Azbazdar Y, Pera EM, De Robertis EM., Cells Dev. December 16, 2023; 203897.   


Information integration during bioelectric regulation of morphogenesis of the embryonic frog brain., Manicka S, Pai VP, Levin M., iScience. December 15, 2023; 26 (12): 108398.   


The sulfotransferase XB5850668.L is required to apportion embryonic ectodermal domains., Marchak A, Neilson KM, Majumdar HD, Yamauchi K, Klein SL, Moody SA., Dev Dyn. December 1, 2023; 252 (12): 1407-1427.   


TBC1D32 variants disrupt retinal ciliogenesis and cause retinitis pigmentosa., Bocquet B, Borday C, Erkilic N, Mamaeva D, Donval A, Masson C, Parain K, Kaminska K, Quinodoz M, Perea-Romero I, Garcia-Garcia G, Jimenez-Medina C, Boukhaddaoui H, Coget A, Leboucq N, Calzetti G, Gandolfi S, Percesepe A, Barili V, Uliana V, Delsante M, Bozzetti F, Scholl HP, Corton M, Ayuso C, Millan JM, Rivolta C, Meunier I, Perron M, Kalatzis V., JCI Insight. November 8, 2023; 8 (21):   


Hybridization led to a rewired pluripotency network in the allotetraploid Xenopus laevis., Phelps WA, Hurton MD, Ayers TN, Carlson AE, Rosenbaum JC, Lee MT., Elife. October 3, 2023; 12   


Addition of exogenous diacylglycerol enhances Wnt/β-catenin signaling through stimulation of macropinocytosis., Azbazdar Y, Tejeda-Munoz N, Monka JC, Dayrit A, Binder G, Ozhan G, De Robertis EM., iScience. September 20, 2023; 26 (10): 108075.   


Protocols for transgenesis at a safe harbor site in the Xenopus laevis genome using CRISPR-Cas9., Shibata Y, Okumura A, Mochii M, Suzuki KT., STAR Protoc. September 15, 2023; 4 (3): 102382.   


β-Catenin and SOX2 Interaction Regulate Visual Experience-Dependent Cell Homeostasis in the Developing Xenopus Thalamus., Gao J, Lu Y, Luo Y, Duan X, Chen P, Zhang X, Wu X, Qiu M, Shen W., Int J Mol Sci. September 2, 2023; 24 (17):   


Paracrine regulation of neural crest EMT by placodal MMP28., Gouignard N, Bibonne A, Mata JF, Bajanca F, Berki B, Barriga EH, Saint-Jeannet JP, Theveneau E., PLoS Biol. August 1, 2023; 21 (8): e3002261.   


Calcium dynamics at the neural cell primary cilium regulate Hedgehog signaling-dependent neurogenesis in the embryonic neural tube., Shim S, Goyal R, Panoutsopoulos AA, Balashova OA, Lee D, Borodinsky LN., Proc Natl Acad Sci U S A. June 6, 2023; 120 (23): e2220037120.   


Npr3 regulates neural crest and cranial placode progenitors formation through its dual function as clearance and signaling receptor., Devotta A, Juraver-Geslin H, Griffin C, Saint-Jeannet JP., Elife. May 10, 2023; 12   


Production and characterization of monoclonal antibodies to Xenopus proteins., Horr B, Kurtz R, Pandey A, Hoffstrom BG, Schock E, LaBonne C, Alfandari D, Alfandari D., Development. February 15, 2023; 150 (4):   


Production and characterization of monoclonal antibodies to xenopus proteins., Horr B, Kurtz R, Pandey A, Hoffstrom BG, Schock E, LaBonne C, Alfandari D, Alfandari D., Development. February 14, 2023;   


Retinoic acid control of pax8 during renal specification of Xenopus pronephros involves hox and meis3., Durant-Vesga J, Suzuki N, Ochi H, Le Bouffant R, Eschstruth A, Ogino H, Umbhauer M, Riou JF., Dev Biol. January 1, 2023; 493 17-28.   


ADAM11 a novel regulator of Wnt and BMP4 signaling in neural crest and cancer., Pandey A, Cousin H, Horr B, Alfandari D, Alfandari D., Front Cell Dev Biol. January 1, 2023; 11 1271178.   


Zmym4 is required for early cranial gene expression and craniofacial cartilage formation., Jourdeuil K, Neilson KM, Cousin H, Tavares ALP, Majumdar HD, Alfandari D, Alfandari D, Moody SA., Front Cell Dev Biol. January 1, 2023; 11 1274788.   


Alcohol induces neural tube defects by reducing retinoic acid signaling and promoting neural plate expansion., Edri T, Cohen D, Shabtai Y, Fainsod A., Front Cell Dev Biol. January 1, 2023; 11 1282273.   


Ash2l, an obligatory component of H3K4 methylation complexes, regulates neural crest development., Mohammadparast S, Chang C., Dev Biol. December 1, 2022; 492 14-24.   


Membrane potential drives the exit from pluripotency and cell fate commitment via calcium and mTOR., Sempou E, Kostiuk V, Zhu J, Cecilia Guerra M, Tyan L, Hwang W, Camacho-Aguilar E, Caplan MJ, Zenisek D, Warmflash A, Owens NDL, Khokha MK., Nat Commun. November 5, 2022; 13 (1): 6681.   


Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions., Johnson K, Freedman S, Braun R, LaBonne C., BMC Genomics. October 23, 2022; 23 (1): 723.   


CRISPR/Cas9-based simple transgenesis in Xenopus laevis., Shibata Y, Suzuki M, Hirose N, Takayama A, Sanbo C, Inoue T, Umesono Y, Agata K, Ueno N, Suzuki KT, Mochii M., Dev Biol. September 1, 2022; 489 76-83.   


The homeodomain transcription factor Ventx2 regulates respiratory progenitor cell number and differentiation timing during Xenopus lung development., Rankin SA, Rankin SA, Zorn AM., Dev Growth Differ. September 1, 2022; 64 (7): 347-361.   


Functions of block of proliferation 1 during anterior development in Xenopus laevis., Gärtner C, Meßmer A, Dietmann P, Kühl M, Kühl SJ., PLoS One. August 2, 2022; 17 (8): e0273507.   

???pagination.result.page??? 1 2 3 4 5 6 7 8 9 10 11 ???pagination.result.next???