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Intrinsically disordered regions are not sufficient to direct the compartmental localization of nucleolar proteins in the nucleus. , Lavering ED, Gandhamaneni M, Weeks DL ., PLoS Biol. November 1, 2023; 21 (11): e3002378.
A cyclin-dependent kinase-mediated phosphorylation switch of disordered protein condensation. , Valverde JM, Dubra G, Phillips M, Haider A, Elena-Real C, Fournet A, Alghoul E, Chahar D, Andrés-Sanchez N, Paloni M, Bernadó P, van Mierlo G, Vermeulen M, van den Toorn H, Heck AJR, Constantinou A, Barducci A, Ghosh K, Sibille N, Knipscheer P , Krasinska L, Fisher D , Altelaar M., Nat Commun. October 9, 2023; 14 (1): 6316.
Time-resolved quantitative proteomic analysis of the developing Xenopus otic vesicle reveals putative congenital hearing loss candidates. , Baxi AB, Nemes P , Moody SA ., iScience. September 15, 2023; 26 (9): 107665.
Molecular dissection of condensin II-mediated chromosome assembly using in vitro assays. , Yoshida MM, Kinoshita K, Aizawa Y, Tane S, Yamashita D, Shintomi K, Hirano T., Elife. August 19, 2022; 11
Component analysis of nucleolar protein compartments using Xenopus laevis oocytes. , Lavering ED, Petros IN, Weeks DL ., Dev Growth Differ. August 1, 2022; 64 (6): 306-317.
Defective heart chamber growth and myofibrillogenesis after knockout of adprhl1 gene function by targeted disruption of the ancestral catalytic active site. , Smith SJ , Towers N , Demetriou K, Mohun TJ ., PLoS One. July 29, 2020; 15 (7): e0235433.
Structural insights into the ability of nucleoplasmin to assemble and chaperone histone octamers for DNA deposition. , Franco A, Arranz R, Fernández-Rivero N, Velázquez-Campoy A, Martín-Benito J, Segura J, Prado A, Valpuesta JM, Muga A., Sci Rep. July 1, 2019; 9 (1): 9487.
Isolation of nanobodies against Xenopus embryonic antigens using immune and non-immune phage display libraries. , Itoh K, Reis AH, Hayhurst A, Sokol SY ., PLoS One. May 2, 2019; 14 (5): e0216083.
Real-time observation of nucleoplasmin-mediated DNA decondensation and condensation reveals its specific functions as a chaperone. , Huo XM, Meng LF, Jiang T, Li M, Sun FZ, Sun B, Li JK., Biochim Biophys Acta Gene Regul Mech. August 1, 2018; 1861 (8): 743-751.
Dual roles for ATP in the regulation of phase separated protein aggregates in Xenopus oocyte nucleoli. , Hayes MH, Peuchen EH , Dovichi NJ , Weeks DL ., Elife. July 17, 2018; 7
A NuRD Complex from Xenopus laevis Eggs Is Essential for DNA Replication during Early Embryogenesis. , Christov CP, Dingwell KS, Skehel M, Wilkes HS, Sale JE, Smith JC , Krude T., Cell Rep. February 27, 2018; 22 (9): 2265-2278.
Dynamic intramolecular regulation of the histone chaperone nucleoplasmin controls histone binding and release. , Warren C, Matsui T, Karp JM, Onikubo T, Cahill S, Brenowitz M, Cowburn D, Girvin M, Shechter D ., Nat Commun. December 20, 2017; 8 (1): 2215.
Chromosomal passenger complex hydrodynamics suggests chaperoning of the inactive state by nucleoplasmin/nucleophosmin. , Hanley ML, Yoo TY, Sonnett M, Needleman DJ, Mitchison TJ ., Mol Biol Cell. June 1, 2017; 28 (11): 1444-1456.
A Quantitative Characterization of Nucleoplasmin/Histone Complexes Reveals Chaperone Versatility. , Fernández-Rivero N, Franco A, Velázquez-Campoy A, Alonso E, Muga A, Prado A., Sci Rep. August 25, 2016; 6 32114.
Expression and purification of the full murine NPM2 and study of its interaction with protamines and histones. , Ellard K, Serpa JJ, Petrotchenko EV, Borchers CH, Ausió J., Biochem Biophys Rep. March 31, 2016; 6 165-171.
Hermes (Rbpms) is a Critical Component of RNP Complexes that Sequester Germline RNAs during Oogenesis. , Aguero T , Zhou Y, Kloc M , Chang P, Houliston E , King ML ., J Dev Biol. March 1, 2016; 4 (1):
Soft viscoelastic properties of nuclear actin age oocytes due to gravitational creep. , Feric M, Broedersz CP, Brangwynne CP ., Sci Rep. November 18, 2015; 5 16607.
Reconstitution of mitotic chromatids with a minimum set of purified factors. , Shintomi K, Takahashi TS, Hirano T., Nat Cell Biol. August 1, 2015; 17 (8): 1014-23.
Developmentally Regulated Post-translational Modification of Nucleoplasmin Controls Histone Sequestration and Deposition. , Onikubo T, Nicklay JJ, Xing L, Warren C, Anson B, Wang WL, Burgos ES, Ruff SE, Shabanowitz J, Cheng RH, Hunt DF, Shechter D ., Cell Rep. March 17, 2015; 10 (10): 1735-1748.
Methods to study histone chaperone function in nucleosome assembly and chromatin transcription. , Senapati P, Sudarshan D, Gadad SS, Shandilya J, Swaminathan V, Kundu TK., Methods Mol Biol. January 1, 2015; 1288 375-94.
Purification of nuclear localization signal-containing proteins and its application to investigation of the mechanisms of the cell division cycle. , Christodoulou A, Yokoyama H ., Small GTPases. January 1, 2015; 6 (1): 20-7.
A role for BMP-induced homeobox gene MIXL1 in acute myelogenous leukemia and identification of type I BMP receptor as a potential target for therapy. , Raymond A, Liu B, Liang H, Wei C, Guindani M, Lu Y, Liang S, St John LS, Molldrem J, Nagarajan L., Oncotarget. December 30, 2014; 5 (24): 12675-93.
Centromeric histone variant CENP-A represses acetylation-dependent chromatin transcription that is relieved by histone chaperone NPM1. , Shandilya J, Senapati P, Hans F, Menoni H, Bouvet P, Dimitrov S, Angelov D, Kundu TK., J Biochem. October 1, 2014; 156 (4): 221-7.
Phosphorylation and arginine methylation mark histone H2A prior to deposition during Xenopus laevis development. , Wang WL, Anderson LC, Nicklay JJ, Chen H , Gamble MJ, Shabanowitz J, Hunt DF, Shechter D ., Epigenetics Chromatin. September 6, 2014; 7 22.
Deep proteomics of the Xenopus laevis egg using an mRNA-derived reference database. , Wühr M , Freeman RM, Presler M, Horb ME , Peshkin L , Gygi S, Kirschner MW ., Curr Biol. July 7, 2014; 24 (13): 1467-1475.
Maintenance of multipotency in human dermal fibroblasts treated with Xenopus laevis egg extract requires exogenous fibroblast growth factor-2. , Kole D, Ambady S , Page RL, Dominko T ., Cell Reprogram. February 1, 2014; 16 (1): 18-28.
A nuclear F-actin scaffold stabilizes ribonucleoprotein droplets against gravity in large cells. , Feric M, Brangwynne CP ., Nat Cell Biol. October 1, 2013; 15 (10): 1253-9.
The nuclear F-actin interactome of Xenopus oocytes reveals an actin-bundling kinesin that is essential for meiotic cytokinesis. , Samwer M, Dehne HJ, Spira F, Kollmar M, Gerlich DW, Urlaub H, Görlich D., EMBO J. July 3, 2013; 32 (13): 1886-902.
Structure of the arginine methyltransferase PRMT5- MEP50 reveals a mechanism for substrate specificity. , Ho MC, Wilczek C, Bonanno JB, Xing L, Seznec J, Matsui T, Carter LG, Onikubo T, Kumar PR, Chan MK, Brenowitz M, Cheng RH, Reimer U, Almo SC, Shechter D ., PLoS One. January 1, 2013; 8 (2): e57008.
Chromatin-bound NLS proteins recruit membrane vesicles and nucleoporins for nuclear envelope assembly via importin-α/β. , Lu Q, Lu Z, Liu Q, Guo L, Ren H, Fu J, Jiang Q, Clarke PR, Zhang C., Cell Res. November 1, 2012; 22 (11): 1562-75.
Routing of Biomolecules and Transgenes' Vectors in Nuclei of Oocytes. , Malecki M, Malecki B., J Fertili In Vitro. April 30, 2012; 2012 (2): 108-118.
A large scale screen for neural stem cell markers in Xenopus retina. , Parain K , Mazurier N, Bronchain O , Borday C, Cabochette P, Chesneau A, Colozza G , El Yakoubi W, Hamdache J, Locker M , Gilchrist MJ , Pollet N , Perron M ., Dev Neurobiol. April 1, 2012; 72 (4): 491-506.
Protein arginine methyltransferase Prmt5- Mep50 methylates histones H2A and H4 and the histone chaperone nucleoplasmin in Xenopus laevis eggs. , Wilczek C, Chitta R, Woo E, Shabanowitz J, Chait BT, Hunt DF, Shechter D ., J Biol Chem. December 9, 2011; 286 (49): 42221-42231.
Crystal structure and function of human nucleoplasmin ( npm2): a histone chaperone in oocytes and embryos. , Platonova O, Akey IV, Head JF, Akey CW., Biochemistry. September 20, 2011; 50 (37): 8078-89.
The nuclear transport machinery recognizes nucleoplasmin-histone complexes. , Arregi I, Falces J, Bañuelos S, Urbaneja MA, Taneva SG., Biochemistry. August 23, 2011; 50 (33): 7104-10.
Active liquid-like behavior of nucleoli determines their size and shape in Xenopus laevis oocytes. , Brangwynne CP , Mitchison TJ , Hyman AA ., Proc Natl Acad Sci U S A. March 15, 2011; 108 (11): 4334-9.
Recognition of nucleoplasmin by its nuclear transport receptor importin α/β: insights into a complete import complex. , Falces J, Arregi I, Konarev PV, Urbaneja MA, Svergun DI, Taneva SG, Bañuelos S., Biochemistry. November 16, 2010; 49 (45): 9756-69.
Nucleoplasmin binds histone H2A- H2B dimers through its distal face. , Ramos I, Martín-Benito J, Finn R, Bretaña L, Aloria K, Arizmendi JM, Ausió J, Muga A, Valpuesta JM, Prado A., J Biol Chem. October 29, 2010; 285 (44): 33771-8.
Novel binding of the mitotic regulator TPX2 (target protein for Xenopus kinesin-like protein 2) to importin-alpha. , Giesecke A, Stewart M., J Biol Chem. June 4, 2010; 285 (23): 17628-35.
A mechanism for histone chaperoning activity of nucleoplasmin: thermodynamic and structural models. , Taneva SG, Bañuelos S, Falces J, Arregi I, Muga A, Konarev PV, Svergun DI, Velázquez-Campoy A, Urbaneja MA., J Mol Biol. October 23, 2009; 393 (2): 448-63.
Xmc mediates Xctr1-independent morphogenesis in Xenopus laevis. , Haremaki T , Weinstein DC ., Dev Dyn. September 1, 2009; 238 (9): 2382-7.
Nucleolar protein B23/ nucleophosmin regulates the vertebrate SUMO pathway through SENP3 and SENP5 proteases. , Yun C, Wang Y, Mukhopadhyay D, Backlund P, Kolli N, Yergey A, Wilkinson KD, Dasso M., J Cell Biol. November 17, 2008; 183 (4): 589-95.
Thermodynamic characterization of nucleoplasmin unfolding: interplay between function and stability. , Franco G, Banuelos S, Falces J, Muga A, Urbaneja MA., Biochemistry. July 29, 2008; 47 (30): 7954-62.
NSC348884, a nucleophosmin inhibitor disrupts oligomer formation and induces apoptosis in human cancer cells. , Qi W, Shakalya K, Stejskal A, Goldman A, Beeck S, Cooke L, Mahadevan D., Oncogene. July 10, 2008; 27 (30): 4210-20.
Antibody microarray analyses of signal transduction protein expression and phosphorylation during porcine oocyte maturation. , Pelech S, Jelinkova L, Susor A, Zhang H , Shi X, Pavlok A, Kubelka M, Kovarova H., J Proteome Res. July 1, 2008; 7 (7): 2860-71.
Cdk11 is a RanGTP-dependent microtubule stabilization factor that regulates spindle assembly rate. , Yokoyama H , Gruss OJ , Rybina S, Caudron M, Schelder M, Wilm M, Mattaj IW , Karsenti E ., J Cell Biol. March 10, 2008; 180 (5): 867-75.
Phosphorylation of both nucleoplasmin domains is required for activation of its chromatin decondensation activity. , Bañuelos S, Omaetxebarria MJ, Ramos I, Larsen MR, Arregi I, Jensen ON, Arizmendi JM, Prado A, Muga A., J Biol Chem. July 20, 2007; 282 (29): 21213-21.
Evolutionarily conserved role of nucleostemin: controlling proliferation of stem/progenitor cells during early vertebrate development. , Beekman C, Nichane M, De Clercq S, Maetens M, Floss T, Wurst W, Bellefroid E , Marine JC., Mol Cell Biol. December 1, 2006; 26 (24): 9291-301.
Nucleoplasmin facilitates reprogramming and in vivo development of bovine nuclear transfer embryos. , Betthauser JM, Pfister-Genskow M, Xu H, Golueke PJ, Lacson JC, Koppang RW, Myers C, Liu B, Hoeschele I, Eilertsen KJ, Leno GH., Mol Reprod Dev. August 1, 2006; 73 (8): 977-86.
Xp54 and related (DDX6-like) RNA helicases: roles in messenger RNP assembly, translation regulation and RNA degradation. , Weston A, Sommerville J., Nucleic Acids Res. June 12, 2006; 34 (10): 3082-94.