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A single-cell, time-resolved profiling of Xenopus mucociliary epithelium reveals nonhierarchical model of development. , Lee J , Møller AF, Chae S, Bussek A , Park TJ, Kim Y, Lee HS , Pers TH, Kwon T , Sedzinski J , Natarajan KN., Sci Adv. April 7, 2023; 9 (14): eadd5745.
Temporal Notch signaling regulates mucociliary cell fates through Hes-mediated competitive de-repression. , Brislinger-Engelhardt MM, Lorenz F, Haas M, Bowden S, Tasca A, Kreutz C, Walentek P ., bioRxiv. February 15, 2023;
Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions. , Johnson K, Freedman S, Braun R, LaBonne C ., BMC Genomics. October 23, 2022; 23 (1): 723.
Signaling Control of Mucociliary Epithelia: Stem Cells, Cell Fates, and the Plasticity of Cell Identity in Development and Disease. , Walentek P ., Cells Tissues Organs. January 1, 2022; 211 (6): 736-753.
Xenopus epidermal and endodermal epithelia as models for mucociliary epithelial evolution, disease, and metaplasia. , Walentek P ., Genesis. February 1, 2021; 59 (1-2): e23406.
Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network. , Mukherjee S , Chaturvedi P , Rankin SA , Rankin SA , Fish MB, Wlizla M , Paraiso KD , MacDonald M, Chen X, Weirauch MT, Blitz IL , Cho KW , Zorn AM ., Elife. September 7, 2020; 9
Repression of Inappropriate Gene Expression in the Vertebrate Embryonic Ectoderm. , Reich S, Weinstein DC ., Genes (Basel). November 6, 2019; 10 (11):
ΔN- Tp63 Mediates Wnt/ β-Catenin-Induced Inhibition of Differentiation in Basal Stem Cells of Mucociliary Epithelia. , Haas M, Gómez Vázquez JL, Sun DI, Tran HT, Brislinger M, Tasca A, Shomroni O, Vleminckx K , Vleminckx K , Walentek P ., Cell Rep. September 24, 2019; 28 (13): 3338-3352.e6.
RARγ is required for mesodermal gene expression prior to gastrulation in Xenopus. , Janesick A , Tang W, Shioda T, Blumberg B ., Development. September 17, 2018; 145 (18):
A gene regulatory network underlying the formation of pre-placodal ectoderm in Xenopus laevis. , Maharana SK , Schlosser G ., BMC Biol. July 16, 2018; 16 (1): 79.
Tbx2 is required for the suppression of mesendoderm during early Xenopus development. , Teegala S , Chauhan R, Lei E, Weinstein DC ., Dev Dyn. July 1, 2018; 247 (7): 903-913.
Manipulating and Analyzing Cell Type Composition of the Xenopus Mucociliary Epidermis. , Walentek P ., Methods Mol Biol. January 1, 2018; 1865 251-263.
A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates. , Plouhinec JL, Medina-Ruiz S, Borday C, Bernard E, Vert JP, Eisen MB, Harland RM , Monsoro-Burq AH ., PLoS Biol. October 19, 2017; 15 (10): e2004045.
Wbp2nl has a developmental role in establishing neural and non-neural ectodermal fates. , Marchak A, Grant PA , Neilson KM , Datta Majumdar H, Yaklichkin S , Johnson D, Moody SA ., Dev Biol. September 1, 2017; 429 (1): 213-224.
A catalog of Xenopus tropicalis transcription factors and their regional expression in the early gastrula stage embryo. , Blitz IL , Paraiso KD , Patrushev I , Chiu WTY , Cho KWY , Gilchrist MJ ., Dev Biol. June 15, 2017; 426 (2): 409-417.
The role of nitric oxide during embryonic epidermis development of Xenopus laevis. , Tomankova S, Abaffy P, Sindelka R ., Biol Open. June 15, 2017; 6 (6): 862-871.
Rfx2 Stabilizes Foxj1 Binding at Chromatin Loops to Enable Multiciliated Cell Gene Expression. , Quigley IK , Kintner C ., PLoS Genet. January 19, 2017; 13 (1): e1006538.
Nodal signalling in Xenopus: the role of Xnr5 in left/ right asymmetry and heart development. , Tadjuidje E , Kofron M , Mir A, Wylie C , Heasman J , Cha SW ., Open Biol. August 1, 2016; 6 (8):
Ptbp1 and Exosc9 knockdowns trigger skin stability defects through different pathways. , Noiret M , Mottier S, Angrand G, Gautier-Courteille C , Lerivray H, Viet J, Paillard L , Mereau A, Hardy S , Audic Y ., Dev Biol. January 15, 2016; 409 (2): 489-501.
Expression pattern of bcar3, a downstream target of Gata2, and its binding partner, bcar1, during Xenopus development. , Green YS, Kwon S, Christian JL ., Gene Expr Patterns. January 1, 2016; 20 (1): 55-62.
Gmnc Is a Master Regulator of the Multiciliated Cell Differentiation Program. , Zhou F, Narasimhan V, Shboul M, Chong YL, Reversade B , Roy S., Curr Biol. December 21, 2015; 25 (24): 3267-73.
ATP4a is required for development and function of the Xenopus mucociliary epidermis - a potential model to study proton pump inhibitor-associated pneumonia. , Walentek P , Beyer T, Hagenlocher C, Müller C, Feistel K , Schweickert A , Harland RM , Blum M ., Dev Biol. December 15, 2015; 408 (2): 292-304.
RNA-Seq and microarray analysis of the Xenopus inner ear transcriptome discloses orthologous OMIM(®) genes for hereditary disorders of hearing and balance. , Ramírez-Gordillo D, Powers TR , van Velkinburgh JC, Trujillo-Provencio C, Schilkey F, Serrano EE ., BMC Res Notes. November 18, 2015; 8 691.
Kruppel-like factor family genes are expressed during Xenopus embryogenesis and involved in germ layer formation and body axis patterning. , Gao Y, Cao Q, Lu L, Zhang X, Zhang Z , Zhang Z , Dong X, Jia W, Cao Y , Cao Y ., Dev Dyn. October 1, 2015; 244 (10): 1328-46.
Myocyte enhancer factor 2D regulates ectoderm specification and adhesion properties of animal cap cells in the early Xenopus embryo. , Katz Imberman S, Kolpakova A , Keren A, Bengal E ., FEBS J. August 1, 2015; 282 (15): 2930-47.
BMP signalling controls the construction of vertebrate mucociliary epithelia. , Cibois M, Luxardi G , Chevalier B, Thomé V, Mercey O, Zaragosi LE , Barbry P, Pasini A, Marcet B, Kodjabachian L ., Development. July 1, 2015; 142 (13): 2352-63.
The serpin PN1 is a feedback regulator of FGF signaling in germ layer and primary axis formation. , Acosta H, Iliev D, Grahn TH, Gouignard N , Maccarana M, Griesbach J, Herzmann S, Sagha M, Climent M , Pera EM ., Development. March 15, 2015; 142 (6): 1146-58.
Sox5 Is a DNA-binding cofactor for BMP R-Smads that directs target specificity during patterning of the early ectoderm. , Nordin K, LaBonne C ., Dev Cell. November 10, 2014; 31 (3): 374-382.
Setting appropriate boundaries: fate, patterning and competence at the neural plate border. , Groves AK, LaBonne C ., Dev Biol. May 1, 2014; 389 (1): 2-12.
A secretory cell type develops alongside multiciliated cells, ionocytes and goblet cells, and provides a protective, anti-infective function in the frog embryonic mucociliary epidermis. , Dubaissi E , Rousseau K, Lea R, Soto X , Nardeosingh S, Schweickert A , Amaya E , Thornton DJ , Papalopulu N ., Development. April 1, 2014; 141 (7): 1514-25.
Xenopus embryonic epidermis as a mucociliary cellular ecosystem to assess the effect of sex hormones in a non-reproductive context. , Castillo-Briceno P , Kodjabachian L ., Front Zool. February 6, 2014; 11 (1): 9.
Early embryonic specification of vertebrate cranial placodes. , Schlosser G ., Wiley Interdiscip Rev Dev Biol. January 1, 2014; 3 (5): 349-63.
Developmental expression of Pitx2c in Xenopus trigeminal and profundal placodes. , Jeong YH, Park BK, Saint-Jeannet JP , Lee YH , Lee YH ., Int J Dev Biol. January 1, 2014; 58 (9): 701-4.
Semicircular canal morphogenesis in the zebrafish inner ear requires the function of gpr126 (lauscher), an adhesion class G protein-coupled receptor gene. , Geng FS, Abbas L, Baxendale S, Holdsworth CJ, Swanson AG, Slanchev K, Hammerschmidt M, Topczewski J, Whitfield TT., Development. November 1, 2013; 140 (21): 4362-74.
Regulation of neurogenesis by Fgf8a requires Cdc42 signaling and a novel Cdc42 effector protein. , Hulstrand AM, Houston DW ., Dev Biol. October 15, 2013; 382 (2): 385-99.
Optimal histone H3 to linker histone H1 chromatin ratio is vital for mesodermal competence in Xenopus. , Lim CY, Reversade B , Knowles BB, Solter D., Development. February 1, 2013; 140 (4): 853-60.
Elastic recoil can either amplify or attenuate muscle- tendon power, depending on inertial vs. fluid dynamic loading. , Richards CT, Sawicki GS., J Theor Biol. November 21, 2012; 313 68-78.
Rab11 regulates planar polarity and migratory behavior of multiciliated cells in Xenopus embryonic epidermis. , Kim K, Lake BB, Haremaki T , Weinstein DC , Sokol SY ., Dev Dyn. September 1, 2012; 241 (9): 1385-95.
Xmab21l3 mediates dorsoventral patterning in Xenopus laevis. , Sridharan J, Haremaki T , Jin Y, Teegala S , Weinstein DC ., Mech Dev. July 1, 2012; 129 (5-8): 136-46.
Understanding ciliated epithelia: the power of Xenopus. , Werner ME, Mitchell BJ ., Genesis. March 1, 2012; 50 (3): 176-85.
Foxi2 is an animally localized maternal mRNA in Xenopus, and an activator of the zygotic ectoderm activator Foxi1e. , Cha SW , McAdams M, Kormish J , Wylie C , Kofron M ., PLoS One. January 1, 2012; 7 (7): e41782.
High mobility group B proteins regulate mesoderm formation and dorsoventral patterning during zebrafish and Xenopus early development. , Cao JM, Li SQ, Zhang HW , Shi DL ., Mech Dev. January 1, 2012; 129 (9-12): 263-74.
The homeobox leucine zipper gene Homez plays a role in Xenopus laevis neurogenesis. , Ghimouz R, Bar I, Hanotel J, Minela B, Keruzore M, Thelie A , Bellefroid EJ ., Biochem Biophys Res Commun. November 11, 2011; 415 (1): 11-6.
The analysis of the expression of a novel gene, Xenopus polka dots, which was expressed in the embryonic and larval epidermis during early development. , Yoshii S, Yamaguchi M, Oogata Y, Tazaki A , Mochii M , Suzuki S, Kinoshita T., Zoolog Sci. November 1, 2011; 28 (11): 809-16.
An essential role for transcription before the MBT in Xenopus laevis. , Skirkanich J , Luxardi G , Yang J , Kodjabachian L , Klein PS ., Dev Biol. September 15, 2011; 357 (2): 478-91.
The roles of maternal Vangl2 and aPKC in Xenopus oocyte and embryo patterning. , Cha SW , Tadjuidje E , Wylie C , Heasman J ., Development. September 1, 2011; 138 (18): 3989-4000.
The functions of maternal Dishevelled 2 and 3 in the early Xenopus embryo. , Tadjuidje E , Cha SW , Louza M , Wylie C , Heasman J ., Dev Dyn. July 1, 2011; 240 (7): 1727-36.
Embryonic frog epidermis: a model for the study of cell-cell interactions in the development of mucociliary disease. , Dubaissi E , Papalopulu N ., Dis Model Mech. March 1, 2011; 4 (2): 179-92.
Specification of ion transport cells in the Xenopus larval skin. , Quigley IK , Stubbs JL, Kintner C ., Development. February 1, 2011; 138 (4): 705-14.
Geminin cooperates with Polycomb to restrain multi-lineage commitment in the early embryo. , Lim JW, Hummert P, Mills JC, Kroll KL ., Development. January 1, 2011; 138 (1): 33-44.