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ZSWIM4 regulates embryonic patterning and BMP signaling by promoting nuclear Smad1 degradation. , Wang C , Liu Z, Zeng Y, Zhou L, Long Q, Hassan IU, Zhang Y , Qi X, Cai D, Mao B , Lu G, Sun J, Yao Y, Deng Y, Zhao Q, Feng B, Zhou Q, Chan WY, Zhao H ., EMBO Rep. February 1, 2024; 25 (2): 646-671.
Transmembrane protein 150b attenuates BMP signaling in the Xenopus organizer. , Keum BR, Yeo I, Koo Y, Han W, Choi SC, Kim GH , Han JK ., J Cell Physiol. August 1, 2023; 238 (8): 1850-1866.
Patterning of the Vertebrate Head in Time and Space by BMP Signaling. , Zhu K , Spaink HP, Durston AJ., J Dev Biol. July 3, 2023; 11 (3):
Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions. , Johnson K, Freedman S, Braun R, LaBonne C ., BMC Genomics. October 23, 2022; 23 (1): 723.
Uncovering the mesendoderm gene regulatory network through multi-omic data integration. , Jansen C, Paraiso KD , Zhou JJ , Blitz IL , Fish MB, Charney RM , Cho JS, Yasuoka Y , Sudou N , Bright AR, Wlizla M , Veenstra GJC , Taira M , Zorn AM , Mortazavi A, Cho KWY., Cell Rep. February 15, 2022; 38 (7): 110364.
Reduced Retinoic Acid Signaling During Gastrulation Induces Developmental Microcephaly. , Gur M, Bendelac-Kapon L, Shabtai Y, Pillemer G, Fainsod A ., Front Cell Dev Biol. January 1, 2022; 10 844619.
Goosecoid Controls Neuroectoderm Specification via Dual Circuits of Direct Repression and Indirect Stimulation in Xenopus Embryos. , Umair Z, Kumar V , Goutam RS, Kumar S , Kumar S , Lee U, Kim J ., Mol Cells. October 31, 2021; 44 (10): 723-735.
Molecular mechanisms of hearing loss in Nager syndrome. , Maharana SK , Saint-Jeannet JP ., Dev Biol. August 1, 2021; 476 200-208.
Dusp1 modulates activin/smad2 mediated germ layer specification via FGF signal inhibition in Xenopus embryos. , Umair Z, Kumar S , Rafiq K , Kumar V , Reman ZU, Lee SH, Kim S, Lee JY , Lee U, Kim J ., Anim Cells Syst (Seoul). November 27, 2020; 24 (6): 359-370.
Foxd4l1.1 negatively regulates transcription of neural repressor ventx1.1 during neuroectoderm formation in Xenopus embryos. , Kumar S , Kumar S , Umair Z, Kumar V , Kumar S , Lee U, Kim J ., Sci Rep. October 8, 2020; 10 (1): 16780.
TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis. , Chen M, Amado N, Tan J, Reis A, Ge M, Abreu JG , He X ., Elife. September 14, 2020; 9
Bighead is a Wnt antagonist secreted by the Xenopus Spemann organizer that promotes Lrp6 endocytosis. , Ding Y , Colozza G , Sosa EA, Moriyama Y , Rundle S, Salwinski L, De Robertis EM ., Proc Natl Acad Sci U S A. September 25, 2018; 115 (39): E9135-E9144.
Roles of Xenopus chemokine ligand CXCLh (XCXCLh) in early embryogenesis. , Goto T , Ito Y , Michiue T ., Dev Growth Differ. May 1, 2018; 60 (4): 226-238.
A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates. , Plouhinec JL, Medina-Ruiz S, Borday C, Bernard E, Vert JP, Eisen MB, Harland RM , Monsoro-Burq AH ., PLoS Biol. October 19, 2017; 15 (10): e2004045.
Nodal/Activin Pathway is a Conserved Neural Induction Signal in Chordates. , Le Petillon Y, Luxardi G , Scerbo P , Cibois M, Leon A, Subirana L, Irimia M, Kodjabachian L , Escriva H, Bertrand S., Nat Ecol Evol. August 1, 2017; 1 (8): 1192-1200.
A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs. , Charney RM , Paraiso KD , Blitz IL , Cho KWY., Semin Cell Dev Biol. June 1, 2017; 66 12-24.
Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula transition. , Wagner G, Singhal N, Nicetto D, Straub T, Kremmer E, Rupp RAW ., PLoS Genet. May 12, 2017; 13 (5): e1006757.
Coordinating heart morphogenesis: A novel role for hyperpolarization-activated cyclic nucleotide-gated (HCN) channels during cardiogenesis in Xenopus laevis. , Pitcairn E, Harris H, Epiney J, Pai VP , Lemire JM , Ye B, Shi NQ, Levin M , McLaughlin KA ., Commun Integr Biol. May 10, 2017; 10 (3): e1309488.
Coordinating heart morphogenesis: A novel role for hyperpolarization-activated cyclic nucleotide-gated (HCN) channels during cardiogenesis in Xenopus laevis. , Pitcairn E, Harris H, Epiney J, Pai VP , Lemire JM , Ye B, Shi NQ, Levin M , McLaughlin KA ., Commun Integr Biol. May 10, 2017; 10 (3): e1309488.
Tbx2 regulates anterior neural specification by repressing FGF signaling pathway. , Cho GS, Park DS, Choi SC, Han JK ., Dev Biol. January 15, 2017; 421 (2): 183-193.
FoxD1 protein interacts with Wnt and BMP signaling to differentially pattern mesoderm and neural tissue. , Polevoy H, Malyarova A, Fonar Y, Elias S, Frank D ., Int J Dev Biol. January 1, 2017; 61 (3-4-5): 293-302.
Tbx3 represses bmp4 expression and, with Pax6, is required and sufficient for retina formation. , Motahari Z, Martinez-De Luna RI , Viczian AS , Zuber ME ., Development. October 1, 2016; 143 (19): 3560-3572.
Activation of a T-box- Otx2- Gsc gene network independent of TBP and TBP-related factors. , Gazdag E, Jacobi UG, van Kruijsbergen I, Weeks DL , Veenstra GJ ., Development. April 15, 2016; 143 (8): 1340-50.
Noggin4 is a long-range inhibitor of Wnt8 signalling that regulates head development in Xenopus laevis. , Eroshkin FM, Nesterenko AM, Borodulin AV , Martynova NY, Ermakova GV, Gyoeva FK, Orlov EE, Belogurov AA, Lukyanov KA, Bayramov AV, Zaraisky AG ., Sci Rep. January 22, 2016; 6 23049.
Specification of anteroposterior axis by combinatorial signaling during Xenopus development. , Carron C, Shi DL ., Wiley Interdiscip Rev Dev Biol. January 1, 2016; 5 (2): 150-68.
The small leucine-rich repeat secreted protein Asporin induces eyes in Xenopus embryos through the IGF signalling pathway. , Luehders K, Sasai N, Davaapil H, Kurosawa-Yoshida M, Hiura H, Brah T, Ohnuma S ., Development. October 1, 2015; 142 (19): 3351-61.
Kdm2a/b Lysine Demethylases Regulate Canonical Wnt Signaling by Modulating the Stability of Nuclear β-Catenin. , Lu L, Gao Y, Zhang Z , Cao Q, Zhang X, Zou J, Cao Y ., Dev Cell. June 22, 2015; 33 (6): 660-74.
Kdm2a/b Lysine Demethylases Regulate Canonical Wnt Signaling by Modulating the Stability of Nuclear β-Catenin. , Lu L, Gao Y, Zhang Z , Cao Q, Zhang X, Zou J, Cao Y ., Dev Cell. June 22, 2015; 33 (6): 660-74.
Notum is required for neural and head induction via Wnt deacylation, oxidation, and inactivation. , Zhang X, Cheong SM, Amado NG, Reis AH, MacDonald BT, Zebisch M, Jones EY, Abreu JG , He X ., Dev Cell. March 23, 2015; 32 (6): 719-30.
Insulin-like factor regulates neural induction through an IGF1 receptor-independent mechanism. , Haramoto Y , Takahashi S , Oshima T, Onuma Y , Ito Y , Asashima M ., Sci Rep. January 12, 2015; 5 11603.
Fezf2 promotes neuronal differentiation through localised activation of Wnt/ β-catenin signalling during forebrain development. , Zhang S , Li J, Lea R, Vleminckx K , Vleminckx K , Amaya E ., Development. December 1, 2014; 141 (24): 4794-805.
Fezf2 promotes neuronal differentiation through localised activation of Wnt/ β-catenin signalling during forebrain development. , Zhang S , Li J, Lea R, Vleminckx K , Vleminckx K , Amaya E ., Development. December 1, 2014; 141 (24): 4794-805.
Occupancy of tissue-specific cis-regulatory modules by Otx2 and TLE/Groucho for embryonic head specification. , Yasuoka Y , Suzuki Y, Takahashi S , Someya H, Sudou N , Haramoto Y , Cho KW , Asashima M , Sugano S, Taira M ., Nat Commun. July 9, 2014; 5 4322.
Fgfr signaling is required as the early eye field forms to promote later patterning and morphogenesis of the eye. , Atkinson-Leadbeater K , Hehr CL , McFarlane S ., Dev Dyn. May 1, 2014; .
Fgfr signaling is required as the early eye field forms to promote later patterning and morphogenesis of the eye. , Atkinson-Leadbeater K , Hehr CL , McFarlane S ., Dev Dyn. May 1, 2014; .
Setting appropriate boundaries: fate, patterning and competence at the neural plate border. , Groves AK, LaBonne C ., Dev Biol. May 1, 2014; 389 (1): 2-12.
Inference of the Xenopus tropicalis embryonic regulatory network and spatial gene expression patterns. , Zheng Z, Christley S, Chiu WT , Blitz IL , Xie X, Cho KW , Nie Q., BMC Syst Biol. January 8, 2014; 8 3.
Zygotic expression of Exostosin1 ( Ext1) is required for BMP signaling and establishment of dorsal- ventral pattern in Xenopus. , Shieh YE, Wells DE, Sater AK ., Int J Dev Biol. January 1, 2014; 58 (1): 27-34.
Role of Sp5 as an essential early regulator of neural crest specification in xenopus. , Park DS, Seo JH, Hong M, Bang W, Han JK , Choi SC., Dev Dyn. December 1, 2013; 242 (12): 1382-94.
Scaling of dorsal-ventral patterning by embryo size-dependent degradation of Spemann's organizer signals. , Inomata H , Shibata T, Haraguchi T , Sasai Y ., Cell. June 6, 2013; 153 (6): 1296-311.
BMP signal attenuates FGF pathway in anteroposterior neural patterning. , Cho GS, Choi SC, Han JK ., Biochem Biophys Res Commun. May 10, 2013; 434 (3): 509-15.
Regulation of primitive hematopoiesis by class I histone deacetylases. , Shah RR, Koniski A, Shinde M, Blythe SA , Fass DM, Haggarty SJ, Palis J, Klein PS ., Dev Dyn. February 1, 2013; 242 (2): 108-21.
Signaling and transcriptional regulation in neural crest specification and migration: lessons from xenopus embryos. , Pegoraro C, Monsoro-Burq AH ., Wiley Interdiscip Rev Dev Biol. January 1, 2013; 2 (2): 247-59.
A developmental requirement for HIRA-dependent H3.3 deposition revealed at gastrulation in Xenopus. , Szenker E, Lacoste N, Almouzni G ., Cell Rep. June 28, 2012; 1 (6): 730-40.
TAK1 promotes BMP4/ Smad1 signaling via inhibition of erk MAPK: a new link in the FGF/BMP regulatory network. , Liu C, Goswami M, Talley J, Chesser-Martinez PL, Lou CH, Sater AK ., Differentiation. April 1, 2012; 83 (4): 210-9.
Transcription factors involved in lens development from the preplacodal ectoderm. , Ogino H , Ochi H , Reza HM, Yasuda K., Dev Biol. March 15, 2012; 363 (2): 333-47.
Maternal xNorrin, a canonical Wnt signaling agonist and TGF-β antagonist, controls early neuroectoderm specification in Xenopus. , Xu S, Cheng F, Liang J, Wu W, Zhang J., PLoS Biol. January 1, 2012; 10 (3): e1001286.
xCITED2 Induces Neural Genes in Animal Cap Explants of Xenopus Embryos. , Yoon J, Kim JH , Lee OJ, Yu SB , Yu SB , Kim JI , Kim SC, Park JB , Lee JY , Kim J ., Exp Neurobiol. September 1, 2011; 20 (3): 123-9.
Use of fully modified 2'-O-methyl antisense oligos for loss-of-function studies in vertebrate embryos. , Schneider PN, Olthoff JT, Matthews AJ, Houston DW ., Genesis. March 1, 2011; 49 (3): 117-23.
SNW1 is a critical regulator of spatial BMP activity, neural plate border formation, and neural crest specification in vertebrate embryos. , Wu MY, Ramel MC, Howell M, Hill CS ., PLoS Biol. February 15, 2011; 9 (2): e1000593.
Peptidyl-prolyl cis-trans isomerase xFKBP1B induces ectopic secondary axis and is involved in eye formation during Xenopus embryogenesis. , Terukina G, Yoshida Y, Takahashi N., Dev Growth Differ. January 1, 2011; 53 (1): 55-68.
Neuronatin promotes neural lineage in ESCs via Ca(2+) signaling. , Lin HH, Bell E , Uwanogho D, Perfect LW, Noristani H, Bates TJ, Snetkov V, Price J, Sun YM., Stem Cells. November 1, 2010; 28 (11): 1950-60.
Neural crest migration requires the activity of the extracellular sulphatases XtSulf1 and XtSulf2. , Guiral EC, Faas L, Pownall ME ., Dev Biol. May 15, 2010; 341 (2): 375-88.
B1 SOX coordinate cell specification with patterning and morphogenesis in the early zebrafish embryo. , Okuda Y, Ogura E, Kondoh H, Kamachi Y., PLoS Genet. May 6, 2010; 6 (5): e1000936.