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Summary Expression Phenotypes Gene Literature (110) GO Terms (8) Nucleotides (76) Proteins (47) Interactants (1136) Wiki
XB-GENEPAGE-478760

Papers associated with six3



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Development of a heat-stable alkaline phosphatase reporter system for cis-regulatory analysis and its application to 3D digital imaging of Xenopus embryonic tissues., Sakagami K, Igawa T, Saikawa K, Sakaguchi Y, Hossain N, Kato C, Kinemori K, Suzuki N, Suzuki M, Kawaguchi A, Ochi H, Tajika Y, Ogino H., Dev Growth Differ. March 4, 2024;         

19th International Xenopus Conference Meeting Report: Latest developments and future perspectives., Zhou C, Kulkarni S., Dev Dyn. February 1, 2024; 253 (2): 272-276.

In vitro modeling of cranial placode differentiation: Recent advances, challenges, and perspectives., Griffin C, Saint-Jeannet JP., Dev Biol. February 1, 2024; 506 20-30.

Mechanical Tensions Regulate Gene Expression in the Xenopus laevis Axial Tissues., Eroshkin FM, Fefelova EA, Bredov DV, Orlov EE, Kolyupanova NM, Mazur AM, Sokolov AS, Zhigalova NA, Prokhortchouk EB, Nesterenko AM, Zaraisky AG., Int J Mol Sci. January 10, 2024; 25 (2):         

Prdm15 acts upstream of Wnt4 signaling in anterior neural development of Xenopus laevis., Saumweber E, Mzoughi S, Khadra A, Werberger A, Schumann S, Guccione E, Schmeisser MJ, Kühl SJ., Front Cell Dev Biol. January 1, 2024; 12 1316048.                            

Using Xenopus to discover new candidate genes involved in BOR and other congenital hearing loss syndromes., Neal SJ, Rajasekaran A, Jusić N, Taylor L, Read M, Alfandari D, Alfandari D, Pignoni F, Moody SA., J Exp Zool B Mol Dev Evol. October 13, 2023;             

Transmembrane protein 150b attenuates BMP signaling in the Xenopus organizer., Keum BR, Yeo I, Koo Y, Han W, Choi SC, Kim GH, Han JK., J Cell Physiol. August 1, 2023; 238 (8): 1850-1866.                        

Patterning of the Vertebrate Head in Time and Space by BMP Signaling., Zhu K, Spaink HP, Durston AJ., J Dev Biol. July 3, 2023; 11 (3):         

Production and characterization of monoclonal antibodies to Xenopus proteins., Horr B, Kurtz R, Pandey A, Hoffstrom BG, Schock E, LaBonne C, Alfandari D, Alfandari D., Development. February 15, 2023; 150 (4):               

Production and characterization of monoclonal antibodies to xenopus proteins., Horr B, Kurtz R, Pandey A, Hoffstrom BG, Schock E, LaBonne C, Alfandari D, Alfandari D., Development. February 14, 2023;                 

Regulation of gene expression downstream of a novel Fgf/Erk pathway during Xenopus development., Cowell LM, King M, West H, Broadsmith M, Genever P, Pownall ME, Isaacs HV., PLoS One. January 1, 2023; 18 (10): e0286040.                                  

Hes5.9 Coordinate FGF and Notch Signaling to Modulate Gastrulation via Regulating Cell Fate Specification and Cell Migration in Xenopus tropicalis., Huang X, Zhang L, Yang S, Zhang Y, Wu M, Chen P., Genes (Basel). November 18, 2020; 11 (11):                   

TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis., Chen M, Amado N, Tan J, Reis A, Ge M, Abreu JG, He X., Elife. September 14, 2020; 9                                                                                           

Dach1 regulates neural crest migration during embryonic development., Kim YK, Lee H, Ismail T, Kim Y, Lee HS., Biochem Biophys Res Commun. July 5, 2020; 527 (4): 896-901.        

miR-199 plays both positive and negative regulatory roles in Xenopus eye development., Ritter RA, Ulrich CH, Brzezinska BN, Shah VV, Zamora MJ, Kelly LE, El-Hodiri HM, Sater AK., Genesis. March 1, 2020; 58 (3-4): e23354.                        

Bioinformatics Screening of Genes Specific for Well-Regenerating Vertebrates Reveals c-answer, a Regulator of Brain Development and Regeneration., Korotkova DD, Lyubetsky VA, Ivanova AS, Rubanov LI, Seliverstov AV, Zverkov OA, Martynova NY, Nesterenko AM, Tereshina MB, Peshkin L, Zaraisky AG., Cell Rep. October 22, 2019; 29 (4): 1027-1040.e6.                              

What are the roles of retinoids, other morphogens, and Hox genes in setting up the vertebrate body axis?, Durston AJ., Genesis. July 1, 2019; 57 (7-8): e23296.            

Regulatory remodeling in the allo-tetraploid frog Xenopus laevis., Elurbe DM, Paranjpe SS, Georgiou G, van Kruijsbergen I, Bogdanovic O, Gibeaux R, Heald R, Lister R, Huynen MA, van Heeringen SJ, Veenstra GJC., Genome Biol. October 24, 2017; 18 (1): 198.              

A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates., Plouhinec JL, Medina-Ruiz S, Borday C, Bernard E, Vert JP, Eisen MB, Harland RM, Monsoro-Burq AH., PLoS Biol. October 19, 2017; 15 (10): e2004045.                                              

Co-accumulation of cis-regulatory and coding mutations during the pseudogenization of the Xenopus laevis homoeologs six6.L and six6.S., Ochi H, Kawaguchi A, Tanouchi M, Suzuki N, Kumada T, Iwata Y, Ogino H., Dev Biol. July 1, 2017; 427 (1): 84-92.                      

Collinear Hox-Hox interactions are involved in patterning the vertebrate anteroposterior (A-P) axis., Zhu K, Spaink HP, Durston AJ., PLoS One. April 11, 2017; 12 (4): e0175287.                

Gene expression analysis of developing cell groups in the pretectal region of Xenopus laevis., Morona R, Ferran JL, Puelles L, González A., J Comp Neurol. March 1, 2017; 525 (4): 715-752.                                            

Members of the Rusc protein family interact with Sufu and inhibit vertebrate Hedgehog signaling., Jin Z, Schwend T, Fu J, Bao Z, Liang J, Zhao H, Mei W, Yang J., Development. November 1, 2016; 143 (21): 3944-3955.                        

Tbx3 represses bmp4 expression and, with Pax6, is required and sufficient for retina formation., Motahari Z, Martinez-De Luna RI, Viczian AS, Zuber ME., Development. October 1, 2016; 143 (19): 3560-3572.                                      

NF2/Merlin is required for the axial pattern formation in the Xenopus laevis embryo., Zhu X, Min Z, Tan R, Tao Q, Tao Q., Mech Dev. November 1, 2015; 138 Pt 3 305-12.                

The small leucine-rich repeat secreted protein Asporin induces eyes in Xenopus embryos through the IGF signalling pathway., Luehders K, Sasai N, Davaapil H, Kurosawa-Yoshida M, Hiura H, Brah T, Ohnuma S., Development. October 1, 2015; 142 (19): 3351-61.                              

Transcriptional regulator PRDM12 is essential for human pain perception., Chen YC, Chen YC, Auer-Grumbach M, Matsukawa S, Zitzelsberger M, Themistocleous AC, Strom TM, Samara C, Moore AW, Cho LT, Young GT, Weiss C, Schabhüttl M, Stucka R, Schmid AB, Parman Y, Graul-Neumann L, Heinritz W, Passarge E, Watson RM, Hertz JM, Moog U, Baumgartner M, Valente EM, Pereira D, Restrepo CM, Katona I, Dusl M, Stendel C, Wieland T, Stafford F, Reimann F, von Au K, Finke C, Willems PJ, Nahorski MS, Shaikh SS, Carvalho OP, Nicholas AK, Karbani G, McAleer MA, Cilio MR, McHugh JC, Murphy SM, Irvine AD, Jensen UB, Windhager R, Weis J, Bergmann C, Rautenstrauss B, Baets J, De Jonghe P, Reilly MM, Kropatsch R, Kurth I, Chrast R, Michiue T, Bennett DL, Woods CG, Senderek J., Nat Genet. July 1, 2015; 47 (7): 803-8.          

Temporally coordinated signals progressively pattern the anteroposterior and dorsoventral body axes., Tuazon FB, Mullins MC., Semin Cell Dev Biol. June 1, 2015; 42 118-33.

Efficient retina formation requires suppression of both Activin and BMP signaling pathways in pluripotent cells., Wong KA, Trembley M, Abd Wahab S, Viczian AS., Biol Open. March 6, 2015; 4 (4): 573-83.                

The requirement of histone modification by PRDM12 and Kdm4a for the development of pre-placodal ectoderm and neural crest in Xenopus., Matsukawa S, Miwata K, Asashima M, Michiue T., Dev Biol. March 1, 2015; 399 (1): 164-176.                    

Biological and biochemical properties of two Xenopus laevis N-acetylgalactosaminyltransferases with contrasting roles in embryogenesis., Voglmeir J, Laurent N, Flitsch SL, Oelgeschläger M, Wilson IB., Comp Biochem Physiol B Biochem Mol Biol. February 1, 2015; 180 40-7.          

Xenopus mutant reveals necessity of rax for specifying the eye field which otherwise forms tissue with telencephalic and diencephalic character., Fish MB, Nakayama T, Fisher M, Hirsch N, Cox A, Reeder R, Carruthers S, Hall A, Stemple DL, Grainger RM., Dev Biol. November 15, 2014; 395 (2): 317-330.                  

Specific induction of cranial placode cells from Xenopus ectoderm by modulating the levels of BMP, Wnt and FGF signaling., Watanabe T, Kanai Y, Matsukawa S, Michiue T., Genesis. October 1, 2014; .

Custos controls β-catenin to regulate head development during vertebrate embryogenesis., Komiya Y, Mandrekar N, Sato A, Dawid IB, Habas R., Proc Natl Acad Sci U S A. September 9, 2014; 111 (36): 13099-104.                                

Sirtuin inhibitor Ex-527 causes neural tube defects, ventral edema formations, and gastrointestinal malformations in Xenopus laevis embryos., Ohata Y, Matsukawa S, Moriyama Y, Michiue T, Morimoto K, Sato Y, Kuroda H., Dev Growth Differ. August 1, 2014; 56 (6): 460-8.          

The evolutionary history of vertebrate cranial placodes--I: cell type evolution., Patthey C, Schlosser G, Shimeld SM., Dev Biol. May 1, 2014; 389 (1): 82-97.        

Setting appropriate boundaries: fate, patterning and competence at the neural plate border., Groves AK, LaBonne C., Dev Biol. May 1, 2014; 389 (1): 2-12.    

FoxA4 favours notochord formation by inhibiting contiguous mesodermal fates and restricts anterior neural development in Xenopus embryos., Murgan S, Castro Colabianchi AM, Monti RJ, Boyadjián López LE, Aguirre CE, Stivala EG, Carrasco AE, López SL., PLoS One. January 1, 2014; 9 (10): e110559.                              

Left-right patterning in Xenopus conjoined twin embryos requires serotonin signaling and gap junctions., Vandenberg LN, Blackiston DJ, Rea AC, Dore TM, Levin M., Int J Dev Biol. January 1, 2014; 58 (10-12): 799-809.                

Simple and efficient CRISPR/Cas9-mediated targeted mutagenesis in Xenopus tropicalis., Nakayama T, Fish MB, Fisher M, Oomen-Hajagos J, Thomsen GH, Grainger RM., Genesis. December 1, 2013; 51 (12): 835-43.            

Developmental mechanisms directing early anterior forebrain specification in vertebrates., Andoniadou CL, Martinez-Barbera JP., Cell Mol Life Sci. October 1, 2013; 70 (20): 3739-52.        

Polycomb repressive complex PRC2 regulates Xenopus retina development downstream of Wnt/β-catenin signaling., Aldiri I, Moore KB, Hutcheson DA, Zhang J, Vetter ML., Development. July 1, 2013; 140 (14): 2867-78.                

sox4 and sox11 function during Xenopus laevis eye development., Cizelsky W, Hempel A, Metzig M, Tao S, Hollemann T, Kühl M, Kühl SJ., PLoS One. July 1, 2013; 8 (7): e69372.              

β-Adrenergic signaling promotes posteriorization in Xenopus early development., Mori S, Moriyama Y, Yoshikawa K, Furukawa T, Kuroda H., Dev Growth Differ. April 1, 2013; 55 (3): 350-8.            

Tet3 CXXC domain and dioxygenase activity cooperatively regulate key genes for Xenopus eye and neural development., Xu Y, Xu Y, Xu C, Kato A, Tempel W, Abreu JG, Bian C, Hu Y, Hu D, Zhao B, Cerovina T, Diao J, Wu F, He HH, Cui Q, Clark E, Ma C, Barbara A, Veenstra GJ, Xu G, Kaiser UB, Liu XS, Sugrue SP, He X, Min J, Kato Y, Shi YG., Cell. December 7, 2012; 151 (6): 1200-13.                

Transcription factors involved in lens development from the preplacodal ectoderm., Ogino H, Ochi H, Reza HM, Yasuda K., Dev Biol. March 15, 2012; 363 (2): 333-47.      

HESX1- and TCF3-mediated repression of Wnt/β-catenin targets is required for normal development of the anterior forebrain., Andoniadou CL, Signore M, Young RM, Gaston-Massuet C, Wilson SW, Fuchs E, Martinez-Barbera JP., Development. November 1, 2011; 138 (22): 4931-42.

Over-expression of atf4 in Xenopus embryos interferes with neurogenesis and eye formation., Liu JT, Yang Y, Guo XG, Chen M, Ding HZ, Chen YL, Chen YL, Wang MR., Dongwuxue Yanjiu. October 1, 2011; 32 (5): 485-91.            

Eukaryotic initiation factor 6 (eif6) overexpression affects eye development in Xenopus laevis., De Marco N, Tussellino M, Vitale A, Campanella C., Differentiation. September 1, 2011; 82 (2): 108-15.          

Circadian Cycles of Gene Expression in the Coral, Acropora millepora., Brady AK, Snyder KA, Vize PD., PLoS One. January 1, 2011; 6 (9): e25072.      

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