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Uncovering the mesendoderm gene regulatory network through multi-omic data integration. , Jansen C, Paraiso KD , Zhou JJ , Blitz IL , Fish MB, Charney RM , Cho JS, Yasuoka Y , Sudou N , Bright AR, Wlizla M , Veenstra GJC , Taira M , Zorn AM , Mortazavi A, Cho KWY., Cell Rep. February 15, 2022; 38 (7): 110364.
Modeling endoderm development and disease in Xenopus. , Edwards NA , Zorn AM ., Curr Top Dev Biol. January 1, 2021; 145 61-90.
Timing is everything: Reiterative Wnt, BMP and RA signaling regulate developmental competence during endoderm organogenesis. , Rankin SA , Rankin SA , McCracken KW, Luedeke DM, Han L , Wells JM , Shannon JM, Zorn AM ., Dev Biol. February 1, 2018; 434 (1): 121-132.
Transcriptome analysis identifies genes involved in sex determination and development of Xenopus laevis gonads. , Piprek RP, Damulewicz M, Kloc M , Kubiak JZ ., Differentiation. January 1, 2018; 100 46-56.
A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates. , Plouhinec JL, Medina-Ruiz S, Borday C, Bernard E, Vert JP, Eisen MB, Harland RM , Monsoro-Burq AH ., PLoS Biol. October 19, 2017; 15 (10): e2004045.
A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs. , Charney RM , Paraiso KD , Blitz IL , Cho KWY., Semin Cell Dev Biol. June 1, 2017; 66 12-24.
Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula transition. , Wagner G, Singhal N, Nicetto D, Straub T, Kremmer E, Rupp RAW ., PLoS Genet. May 12, 2017; 13 (5): e1006757.
Genomic integration of Wnt/ β-catenin and BMP/Smad1 signaling coordinates foregut and hindgut transcriptional programs. , Stevens ML , Chaturvedi P , Rankin SA , Rankin SA , Macdonald M, Jagannathan S, Yukawa M, Barski A, Zorn AM ., Development. April 1, 2017; 144 (7): 1283-1295.
Genomic integration of Wnt/ β-catenin and BMP/Smad1 signaling coordinates foregut and hindgut transcriptional programs. , Stevens ML , Chaturvedi P , Rankin SA , Rankin SA , Macdonald M, Jagannathan S, Yukawa M, Barski A, Zorn AM ., Development. April 1, 2017; 144 (7): 1283-1295.
A Retinoic Acid- Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification. , Rankin SA , Rankin SA , Han L , McCracken KW, Kenny AP , Anglin CT, Grigg EA, Crawford CM, Wells JM , Shannon JM, Zorn AM ., Cell Rep. June 28, 2016; 16 (1): 66-78.
A Retinoic Acid- Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification. , Rankin SA , Rankin SA , Han L , McCracken KW, Kenny AP , Anglin CT, Grigg EA, Crawford CM, Wells JM , Shannon JM, Zorn AM ., Cell Rep. June 28, 2016; 16 (1): 66-78.
Inference of the Xenopus tropicalis embryonic regulatory network and spatial gene expression patterns. , Zheng Z, Christley S, Chiu WT , Blitz IL , Xie X, Cho KW , Nie Q., BMC Syst Biol. January 8, 2014; 8 3.
A genome-wide survey of maternal and embryonic transcripts during Xenopus tropicalis development. , Paranjpe SS, Jacobi UG, van Heeringen SJ, Veenstra GJ ., BMC Genomics. November 6, 2013; 14 762.
sfrp1 promotes cardiomyocyte differentiation in Xenopus via negative-feedback regulation of Wnt signalling. , Gibb N , Lavery DL, Hoppler S ., Development. April 1, 2013; 140 (7): 1537-49.
TAK1 promotes BMP4/ Smad1 signaling via inhibition of erk MAPK: a new link in the FGF/BMP regulatory network. , Liu C, Goswami M, Talley J, Chesser-Martinez PL, Lou CH, Sater AK ., Differentiation. April 1, 2012; 83 (4): 210-9.
Comparative gene expression analysis and fate mapping studies suggest an early segregation of cardiogenic lineages in Xenopus laevis. , Gessert S, Kühl M ., Dev Biol. October 15, 2009; 334 (2): 395-408.
Comparative gene expression analysis and fate mapping studies suggest an early segregation of cardiogenic lineages in Xenopus laevis. , Gessert S, Kühl M ., Dev Biol. October 15, 2009; 334 (2): 395-408.
HIF-1alpha signaling upstream of NKX2.5 is required for cardiac development in Xenopus. , Nagao K, Taniyama Y, Kietzmann T, Doi T, Komuro I, Morishita R., J Biol Chem. April 25, 2008; 283 (17): 11841-9.
HIF-1alpha signaling upstream of NKX2.5 is required for cardiac development in Xenopus. , Nagao K, Taniyama Y, Kietzmann T, Doi T, Komuro I, Morishita R., J Biol Chem. April 25, 2008; 283 (17): 11841-9.
The Gata5 target, TGIF2, defines the pancreatic region by modulating BMP signals within the endoderm. , Spagnoli FM , Brivanlou AH ., Development. February 1, 2008; 135 (3): 451-61.
An atlas of differential gene expression during early Xenopus embryogenesis. , Pollet N , Muncke N, Verbeek B, Li Y, Fenger U, Delius H, Niehrs C ., Mech Dev. March 1, 2005; 122 (3): 365-439.
Induction of cardiomyocytes by GATA4 in Xenopus ectodermal explants. , Latinkić BV, Kotecha S , Mohun TJ ., Development. August 1, 2003; 130 (16): 3865-76.
Inhibition of Wnt activity induces heart formation from posterior mesoderm. , Marvin MJ, Di Rocco G, Gardiner A, Bush SM, Lassar AB., Genes Dev. February 1, 2001; 15 (3): 316-27.
A role for GATA5 in Xenopus endoderm specification. , Weber H, Symes CE, Walmsley ME, Rodaway AR, Patient RK ., Development. October 1, 2000; 127 (20): 4345-60.
Serrate and Notch specify cell fates in the heart field by suppressing cardiomyogenesis. , Rones MS, McLaughlin KA , Raffin M, Mercola M ., Development. September 1, 2000; 127 (17): 3865-76.
FOG acts as a repressor of red blood cell development in Xenopus. , Deconinck AE, Mead PE , Tevosian SG, Crispino JD, Katz SG, Zon LI , Orkin SH., Development. May 1, 2000; 127 (10): 2031-40.