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Summary Expression Phenotypes Gene Literature (100) GO Terms (15) Nucleotides (243) Proteins (53) Interactants (620) Wiki
XB-GENEPAGE-480430

Papers associated with zic3



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Transmembrane H+ fluxes and the regulation of neural induction in Xenopus laevis., Leung HC, Leclerc C, Moreau M, Shipley AM, Miller AL, Miller AL, Webb SE., Zygote. April 1, 2022; 30 (2): 267-278.        

Goosecoid Controls Neuroectoderm Specification via Dual Circuits of Direct Repression and Indirect Stimulation in Xenopus Embryos., Umair Z, Kumar V, Goutam RS, Kumar S, Kumar S, Lee U, Kim J., Mol Cells. October 31, 2021; 44 (10): 723-735.          

SUMOylation Potentiates ZIC Protein Activity to Influence Murine Neural Crest Cell Specification., Bellchambers HM, Barratt KS, Diamand KEM, Arkell RM., Int J Mol Sci. September 28, 2021; 22 (19):


Smad2 and Smad3 differentially modulate chordin transcription via direct binding on the distal elements in gastrula Xenopus embryos., Kumar V, Umair Z, Kumar S, Kumar S, Lee U, Kim J., Biochem Biophys Res Commun. June 25, 2021; 559 168-175.          

Altering metabolite distribution at Xenopus cleavage stages affects left-right gene expression asymmetries., Onjiko RM, Nemes P, Moody SA., Genesis. June 1, 2021; 59 (5-6): e23418.          

Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., Bright AR, van Genesen S, Li Q, Grasso A, Frölich S, van der Sande M, van Heeringen SJ, Veenstra GJC., EMBO J. May 3, 2021; 40 (9): e104913.                        

Cav1 channels is also a story of non excitable cells: Application to calcium signalling in two different non related models., Pelletier L, Moreau M., Biochim Biophys Acta Mol Cell Res. May 1, 2021; 1868 (6): 118996.

Characterising open chromatin in chick embryos identifies cis-regulatory elements important for paraxial mesoderm formation and axis extension., Mok GF, Folkes L, Weldon SA, Maniou E, Martinez-Heredia V, Godden AM, Williams RM, Sauka-Spengler T, Wheeler GN, Moxon S, Münsterberg AE., Nat Commun. February 19, 2021; 12 (1): 1157.              

Dusp1 modulates activin/smad2 mediated germ layer specification via FGF signal inhibition in Xenopus embryos., Umair Z, Kumar S, Rafiq K, Kumar V, Reman ZU, Lee SH, Kim S, Lee JY, Lee U, Kim J., Anim Cells Syst (Seoul). November 27, 2020; 24 (6): 359-370.            

Foxd4l1.1 negatively regulates transcription of neural repressor ventx1.1 during neuroectoderm formation in Xenopus embryos., Kumar S, Kumar S, Umair Z, Kumar V, Kumar S, Lee U, Kim J., Sci Rep. October 8, 2020; 10 (1): 16780.            

Epigenetic homogeneity in histone methylation underlies sperm programming for embryonic transcription., Oikawa M, Simeone A, Hormanseder E, Teperek M, Gaggioli V, O'Doherty A, Falk E, Sporniak M, D'Santos C, Franklin VNR, Kishore K, Bradshaw CR, Keane D, Freour T, David L, Grzybowski AT, Ruthenburg AJ, Gurdon J, Jullien J., Nat Commun. July 13, 2020; 11 (1): 3491.              

Dach1 regulates neural crest migration during embryonic development., Kim YK, Lee H, Ismail T, Kim Y, Lee HS., Biochem Biophys Res Commun. July 5, 2020; 527 (4): 896-901.        

Natural size variation among embryos leads to the corresponding scaling in gene expression., Leibovich A, Edri T, Klein SL, Moody SA, Fainsod A., Dev Biol. June 15, 2020; 462 (2): 165-179.                    

Trpc1 as the Missing Link Between the Bmp and Ca2+ Signalling Pathways During Neural Specification in Amphibians., Néant I, Leung HC, Webb SE, Miller AL, Miller AL, Moreau M, Leclerc C., Sci Rep. November 5, 2019; 9 (1): 16049.                                    

Xenbase: Facilitating the Use of Xenopus to Model Human Disease., Nenni MJ, Fisher ME, Fisher ME, James-Zorn C, Pells TJ, Ponferrada V, Chu S, Fortriede JD, Burns KA, Wang Y, Lotay VS, Wang DZ, Segerdell E, Chaturvedi P, Karimi K, Vize PD, Zorn AM., Front Physiol. January 1, 2019; 10 154.          

Ventx1.1 as a Direct Repressor of Early Neural Gene zic3 in Xenopus laevis., Umair Z, Kumar S, Kim DH, Rafiq K, Kumar V, Kim S, Park JB, Lee JY, Lee U, Kim J., Mol Cells. December 31, 2018; 41 (12): 1061-1071.          

Bighead is a Wnt antagonist secreted by the Xenopus Spemann organizer that promotes Lrp6 endocytosis., Ding Y, Colozza G, Sosa EA, Moriyama Y, Rundle S, Salwinski L, De Robertis EM., Proc Natl Acad Sci U S A. September 25, 2018; 115 (39): E9135-E9144.                    

The atypical mitogen-activated protein kinase ERK3 is essential for establishment of epithelial architecture., Takahashi C, Miyatake K, Kusakabe M, Nishida E., J Biol Chem. June 1, 2018; 293 (22): 8342-8361.                                      

Spemann organizer transcriptome induction by early beta-catenin, Wnt, Nodal, and Siamois signals in Xenopus laevis., Ding Y, Ploper D, Sosa EA, Colozza G, Moriyama Y, Benitez MD, Zhang K, Merkurjev D, De Robertis EM., Proc Natl Acad Sci U S A. April 11, 2017; 114 (15): E3081-E3090.                        

Copy number variation as a genetic basis for heterotaxy and heterotaxy-spectrum congenital heart defects., Cowan JR, Tariq M, Shaw C, Rao M, Belmont JW, Lalani SR, Smolarek TA, Ware SM., Philos Trans R Soc Lond B Biol Sci. December 19, 2016; 371 (1710):


IFT46 plays crucial roles in craniofacial and cilia development., Park I, Lee HK, Kim C, Ismail T, Kim YK, Park JW, Kwon OS, Kang BS, Lee DS, Park TJ, Park MJ, Choi SC, Lee HS., Biochem Biophys Res Commun. August 26, 2016; 477 (3): 419-25.            

The positive transcriptional elongation factor (P-TEFb) is required for neural crest specification., Hatch VL, Marin-Barba M, Moxon S, Ford CT, Ward NJ, Tomlinson ML, Desanlis I, Hendry AE, Hontelez S, van Kruijsbergen I, Veenstra GJ, Münsterberg AE, Wheeler GN., Dev Biol. August 15, 2016; 416 (2): 361-72.                                    

Kcnip1 a Ca²⁺-dependent transcriptional repressor regulates the size of the neural plate in Xenopus., Néant I, Mellström B, Gonzalez P, Naranjo JR, Moreau M, Leclerc C., Biochim Biophys Acta. September 1, 2015; 1853 (9): 2077-85.  

E2a is necessary for Smad2/3-dependent transcription and the direct repression of lefty during gastrulation., Wills AE, Baker JC., Dev Cell. February 9, 2015; 32 (3): 345-57.                  

PV.1 induced by FGF-Xbra functions as a repressor of neurogenesis in Xenopus embryos., Yoon J, Kim JH, Lee SY, Kim S, Park JB, Lee JY, Kim J., BMB Rep. December 1, 2014; 47 (12): 673-8.        

Global identification of Smad2 and Eomesodermin targets in zebrafish identifies a conserved transcriptional network in mesendoderm and a novel role for Eomesodermin in repression of ectodermal gene expression., Nelson AC, Cutty SJ, Niini M, Stemple DL, Flicek P, Houart C, Bruce AE, Wardle FC., BMC Biol. October 3, 2014; 12 81.            

Two different network topologies yield bistability in models of mesoderm and anterior mesendoderm specification in amphibians., Brown LE, King JR, Loose M., J Theor Biol. July 21, 2014; 353 67-77.                    

PV.1 suppresses the expression of FoxD5b during neural induction in Xenopus embryos., Yoon J, Kim JH, Kim SC, Park JB, Lee JY, Kim J., Mol Cells. March 1, 2014; 37 (3): 220-5.        

ERF and ETV3L are retinoic acid-inducible repressors required for primary neurogenesis., Janesick A, Abbey R, Chung C, Liu S, Taketani M, Blumberg B., Development. August 1, 2013; 140 (15): 3095-106.                                                              

WNK4 is an essential effector of anterior formation in FGF signaling., Shimizu M, Goto T, Sato A, Shibuya H., Genes Cells. June 1, 2013; 18 (6): 442-9.        

Conserved structural domains in FoxD4L1, a neural forkhead box transcription factor, are required to repress or activate target genes., Klein SL, Neilson KM, Orban J, Yaklichkin S, Hoffbauer J, Mood K, Daar IO, Moody SA., PLoS One. April 4, 2013; 8 (4): e61845.                  

Suv4-20h histone methyltransferases promote neuroectodermal differentiation by silencing the pluripotency-associated Oct-25 gene., Nicetto D, Hahn M, Jung J, Schneider TD, Straub T, David R, Schotta G, Rupp RA., PLoS Genet. January 1, 2013; 9 (1): e1003188.                                                                

A developmental requirement for HIRA-dependent H3.3 deposition revealed at gastrulation in Xenopus., Szenker E, Lacoste N, Almouzni G., Cell Rep. June 28, 2012; 1 (6): 730-40.                                      

Specific domains of FoxD4/5 activate and repress neural transcription factor genes to control the progression of immature neural ectoderm to differentiating neural plate., Neilson KM, Klein SL, Mhaske P, Mood K, Daar IO, Moody SA., Dev Biol. May 15, 2012; 365 (2): 363-75.                        

Early neural crest induction requires an initial inhibition of Wnt signals., Steventon B, Mayor R., Dev Biol. May 1, 2012; 365 (1): 196-207.              

An essential and highly conserved role for Zic3 in left-right patterning, gastrulation and convergent extension morphogenesis., Cast AE, Gao C, Amack JD, Ware SM., Dev Biol. April 1, 2012; 364 (1): 22-31.            

TAK1 promotes BMP4/Smad1 signaling via inhibition of erk MAPK: a new link in the FGF/BMP regulatory network., Liu C, Goswami M, Talley J, Chesser-Martinez PL, Lou CH, Sater AK., Differentiation. April 1, 2012; 83 (4): 210-9.                  

Xenopus Zic3 controls notochord and organizer development through suppression of the Wnt/β-catenin signaling pathway., Fujimi TJ, Hatayama M, Aruga J., Dev Biol. January 15, 2012; 361 (2): 220-31.                          

Geminin is required for zygotic gene expression at the Xenopus mid-blastula transition., Kerns SL, Schultz KM, Barry KA, Thorne TM, McGarry TJ., PLoS One. January 1, 2012; 7 (5): e38009.                        

Transcriptomic analysis of avian digits reveals conserved and derived digit identities in birds., Wang Z, Young RL, Xue H, Wagner GP., Nature. September 4, 2011; 477 (7366): 583-6.

xCITED2 Induces Neural Genes in Animal Cap Explants of Xenopus Embryos., Yoon J, Kim JH, Lee OJ, Yu SB, Yu SB, Kim JI, Kim SC, Park JB, Lee JY, Kim J., Exp Neurobiol. September 1, 2011; 20 (3): 123-9.        

Role of BMP, FGF, calcium signaling, and Zic proteins in vertebrate neuroectodermal differentiation., Aruga J, Mikoshiba K., Neurochem Res. July 1, 2011; 36 (7): 1286-92.      

MIM regulates vertebrate neural tube closure., Liu W, Komiya Y, Mezzacappa C, Khadka DK, Runnels L, Habas R., Development. May 1, 2011; 138 (10): 2035-47.                            

SNW1 is a critical regulator of spatial BMP activity, neural plate border formation, and neural crest specification in vertebrate embryos., Wu MY, Ramel MC, Howell M, Hill CS., PLoS Biol. February 15, 2011; 9 (2): e1000593.                              

Transdifferentiation from cornea to lens in Xenopus laevis depends on BMP signalling and involves upregulation of Wnt signalling., Day RC, Beck CW., BMC Dev Biol. January 26, 2011; 11 54.                                                

The RNA-binding protein Xp54nrb isolated from a Ca²+-dependent screen is expressed in neural structures during Xenopus laevis development., Neant I, Deisig N, Scerbo P, Leclerc C, Moreau M., Int J Dev Biol. January 1, 2011; 55 (10-12): 923-31.        

Prohibitin1 acts as a neural crest specifier in Xenopus development by repressing the transcription factor E2F1., Schneider M, Schambony A, Wedlich D., Development. December 1, 2010; 137 (23): 4073-81.                        

BMP inhibition initiates neural induction via FGF signaling and Zic genes., Marchal L, Luxardi G, Thomé V, Kodjabachian L., Proc Natl Acad Sci U S A. October 13, 2009; 106 (41): 17437-42.        

FGF-activated calcium channels control neural gene expression in Xenopus., Lee KW, Moreau M, Néant I, Bibonne A, Leclerc C., Biochim Biophys Acta. June 1, 2009; 1793 (6): 1033-40.            

foxD5 plays a critical upstream role in regulating neural ectodermal fate and the onset of neural differentiation., Yan B, Neilson KM, Moody SA., Dev Biol. May 1, 2009; 329 (1): 80-95.              

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