Heithem El-Hodiri - Publications

Publications (41)

XB-PERS-545

Publications By Heithem El-Hodiri

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miR-199 plays both positive and negative regulatory roles in Xenopus eye development., Ritter RA, Ulrich CH, Brzezinska BN, Shah VV, Zamora MJ, Kelly LE, El-Hodiri HM, Sater AK., Genesis. March 1, 2020; 58 (3-4): e23354.
The C-terminus of the retinal homeobox (rax) gene product modulates transcription in a context-dependent manner., Buescher JL, El-Hodiri HM., Mol Vis. February 23, 2019; 25 165-173.
Identification of retinal homeobox (rax) gene-dependent genes by a microarray approach: The DNA endoglycosylase neil3 is a major downstream component of the rax genetic pathway., Pan Y, Kelly LE, El-Hodiri HM., Dev Dyn. November 1, 2018; 247 (11): 1199-1210.
Visualization of Gene Expression Patterns by In Situ Hybridization on Early Stages of Development of Xenopus laevis., El-Hodiri HM, Kelly LE., Methods Mol Biol. January 1, 2018; 1797 325-335.
Regulation of photoreceptor gene transcription via a highly conserved transcriptional regulatory element by vsx gene products., Pan Y, Comiskey DF, Kelly LE, Chandler DS, El-Hodiri HM., Mol Vis. December 14, 2016; 22 1421-1428.
Xenopus laevis Nkx5.3 and sensory organ homeobox (SOHo) are expressed in developing sensory organs and ganglia of the head and anterior trunk., Kelly LE, El-Hodiri HM., Dev Genes Evol. November 1, 2016; 226 (6): 423-428.
Autoregulation of retinal homeobox (rax) gene promoter activity through a highly conserved genomic element., Kelly LE, Martinez-De Luna RI, El-Hodiri HM., Genesis. November 1, 2016; 54 (11): 562-567.
Expression of the insulinoma-associated 1 (insm1) gene in Xenopus laevis tadpole retina and brain., Bosse JL, El-Hodiri HM., Gene Expr Patterns. September 1, 2016; 22 (1): 26-29.
In vivo functional analysis of transcription factor: response element interaction using transgenic Xenopus laevis., El-Hodiri HM, Pan Y, Kelly LE., Methods Mol Biol. January 1, 2012; 884 41-51.
The Retinal Homeobox (Rx) gene is necessary for retinal regeneration., Martinez-De Luna RI, Kelly LE, El-Hodiri HM., Dev Biol. May 1, 2011; 353 (1): 10-8.
Regulation of retinal homeobox gene transcription by cooperative activity among cis-elements., Martinez-de Luna RI, Moose HE, Kelly LE, Nekkalapudi S, El-Hodiri HM., Gene. November 1, 2010; 467 (1-2): 13-24.
Regulation of photoreceptor gene expression by the retinal homeobox (Rx) gene product., Pan Y, Martinez-De Luna RI, Lou CH, Nekkalapudi S, Kelly LE, Sater AK, El-Hodiri HM., Dev Biol. March 15, 2010; 339 (2): 494-506.
Temporal regulation of Ath5 gene expression during eye development., Willardsen MI, Suli A, Pan Y, Marsh-Armstrong N, Chien CB, El-Hodiri H, Brown NL, Moore KB, Vetter ML., Dev Biol. February 15, 2009; 326 (2): 471-81.
xArx2: an aristaless homolog that regulates brain regionalization during development in Xenopus laevis., Wolanski M, Khosrowshahian F, Kelly LE, El-Hodiri HM, Crawford MJ., Genesis. January 1, 2009; 47 (1): 19-31.
The function of the Aristaless-related homeobox (Arx) gene product as a transcriptional repressor is diminished by mutations associated with X-linked mental retardation (XLMR)., Fullenkamp AN, El-Hodiri HM., Biochem Biophys Res Commun. December 5, 2008; 377 (1): 73-8.
PP2A:B56epsilon is required for eye induction and eye field separation., Rorick AM, Mei W, Liette NL, Phiel C, El-Hodiri HM, Yang J., Dev Biol. February 15, 2007; 302 (2): 477-93.
Expression of the forkhead transcription factor FoxN4 in progenitor cells in the developing Xenopus laevis retina and brain., Kelly LE, Nekkalapudi S, El-Hodiri HM., Gene Expr Patterns. January 1, 2007; 7 (3): 233-8.
The Xenopus ortholog of the nuclear hormone receptor Nr2e3 is primarily expressed in developing photoreceptors., Martinez-De Luna RI, El-Hodiri HM., Int J Dev Biol. January 1, 2007; 51 (3): 235-40.
The Rx-like homeobox gene (Rx-L) is necessary for normal photoreceptor development., Pan Y, Nekkalapudi S, Kelly LE, El-Hodiri HM., Invest Ophthalmol Vis Sci. October 1, 2006; 47 (10): 4245-53.
Pbx1 and Meis1 regulate activity of the Xenopus laevis Zic3 promoter through a highly conserved region., Kelly LE, Carrel TL, Herman GE, El-Hodiri HM., Biochem Biophys Res Commun. June 9, 2006; 344 (3): 1031-7.
Conserved regulatory elements establish the dynamic expression of Rpx/HesxI in early vertebrate development., Chou SJ, Hermesz E, Hatta T, Feltner D, El-Hodiri HM, Jamrich M, Mahon K., Dev Biol. April 15, 2006; 292 (2): 533-45.
Expression of a novel Ski-like gene in Xenopus development., Seufert DW, Hegde RS, Nekkalapudi S, Kelly LE, El-Hodiri HM., Gene Expr Patterns. December 1, 2005; 6 (1): 22-8.
Smad1 and Smad8 function similarly in mammalian central nervous system development., Hester M, Thompson JC, Mills J, Liu Y, El-Hodiri HM, Weinstein M., Mol Cell Biol. June 1, 2005; 25 (11): 4683-92.
Recombineered Xenopus tropicalis BAC expresses a GFP reporter under the control of Arx transcriptional regulatory elements in transgenic Xenopus laevis embryos., Kelly LE, Davy BE, Berbari NF, Robinson ML, El-Hodiri HM., Genesis. April 1, 2005; 41 (4): 185-91.
Xenopus aristaless-related homeobox (xARX) gene product functions as both a transcriptional activator and repressor in forebrain development., Seufert DW, Prescott NL, El-Hodiri HM., Dev Dyn. February 1, 2005; 232 (2): 313-24.
Xenopus laevis FoxE1 is primarily expressed in the developing pituitary and thyroid., El-Hodiri HM, Seufert DW, Nekkalapudi S, Prescott NL, Kelly LE, Jamrich M., Int J Dev Biol. January 1, 2005; 49 (7): 881-4.
Smad2 and Smad3 coordinately regulate craniofacial and endodermal development., Liu Y, Festing M, Thompson JC, Hester M, Rankin S, El-Hodiri HM, Zorn AM, Weinstein M., Dev Biol. June 15, 2004; 270 (2): 411-26.
Regulation of vertebrate eye development by Rx genes., Bailey TJ, El-Hodiri H, Zhang L, Shah R, Mathers PH, Jamrich M., Int J Dev Biol. January 1, 2004; 48 (8-9): 761-70.
Evidence for antagonism of BMP-4 signals by MAP kinase during Xenopus axis determination and neural specification., Sater AK, El-Hodiri HM, Goswami M, Alexander TB, Al-Sheikh O, Etkin LD, Akif Uzman J., Differentiation. September 1, 2003; 71 (7): 434-44.
Targeted expression of the dominant-negative FGFR4a in the eye using Xrx1A regulatory sequences interferes with normal retinal development., Zhang L, El-Hodiri HM, Ma HF, Zhang X, Servetnick M, Wensel TG, Jamrich M., Development. September 1, 2003; 130 (17): 4177-86.
The Xenopus arx gene is expressed in the developing rostral forebrain., El-Hodiri HM, Qi XL, Seufert DW., Dev Genes Evol. January 1, 2003; 212 (12): 608-12.
The role of ZIC3 in vertebrate development., Herman GE, El-Hodiri HM., Cytogenet Genome Res. January 1, 2002; 99 (1-4): 229-35.
Fox (forkhead) genes are involved in the dorso-ventral patterning of the Xenopus mesoderm., El-Hodiri H, Bhatia-Dey N, Kenyon K, Ault K, Dirksen M, Jamrich M., Int J Dev Biol. January 1, 2001; 45 (1): 265-71.
Modules in the photoreceptor RGS9-1.Gbeta 5L GTPase-accelerating protein complex control effector coupling, GTPase acceleration, protein folding, and stability., He W, Lu L, Zhang X, El-Hodiri HM, Chen CK, Slep KC, Simon MI, Jamrich M, Wensel TG., J Biol Chem. November 24, 2000; 275 (47): 37093-100.
Regulation of the pancreatic islet-specific gene BETA2 (neuroD) by neurogenin 3., Huang HP, Liu M, El-Hodiri HM, Chu K, Jamrich M, Tsai MJ., Mol Cell Biol. May 1, 2000; 20 (9): 3292-307.
Identification and cloning of xp95, a putative signal transduction protein in Xenopus oocytes., Che S, El-Hodiri HM, Wu CF, Nelman-Gonzalez M, Weil MM, Etkin LD, Clark RB, Kuang J., J Biol Chem. February 26, 1999; 274 (9): 5522-31.
Mitogen-activated protein kinase and neural specification in Xenopus., Uzgare AR, Uzman JA, El-Hodiri HM, Sater AK., Proc Natl Acad Sci U S A. December 8, 1998; 95 (25): 14833-8.
Characterization and function of Xnf7 during early development of Xenopus., Etkin LD, el-Hodiri HM, Nakamura H, Wu CF, Shou W, Gong SG., J Cell Physiol. November 1, 1997; 173 (2): 144-6.
xnf7 functions in dorsal-ventral patterning of the Xenopus embryo., El-Hodiri HM, Shou W, Etkin LD., Dev Biol. October 1, 1997; 190 (1): 1-17.
Mitogen-activated protein kinase and cyclin B/Cdc2 phosphorylate Xenopus nuclear factor 7 (xnf7) in extracts from mature oocytes. Implications for regulation of xnf7 subcellular localization., El-Hodiri HM, Che S, Nelman-Gonzalez M, Kuang J, Etkin LD., J Biol Chem. August 15, 1997; 272 (33): 20463-70.
Interaction of the CCAAT displacement protein with shared regulatory elements required for transcription of paired histone genes., el-Hodiri HM, Perry M., Mol Cell Biol. July 1, 1995; 15 (7): 3587-96.

miR-199 plays both positive and negative regulatory roles in Xenopus eye development., Ritter RA, Ulrich CH, Brzezinska BN, Shah VV, Zamora MJ, Kelly LE, El-Hodiri HM, Sater AK., Genesis. March 1, 2020; 58 (3-4): e23354.

The C-terminus of the retinal homeobox (rax) gene product modulates transcription in a context-dependent manner., Buescher JL, El-Hodiri HM., Mol Vis. February 23, 2019; 25 165-173.

Identification of retinal homeobox (rax) gene-dependent genes by a microarray approach: The DNA endoglycosylase neil3 is a major downstream component of the rax genetic pathway., Pan Y, Kelly LE, El-Hodiri HM., Dev Dyn. November 1, 2018; 247 (11): 1199-1210.

Visualization of Gene Expression Patterns by In Situ Hybridization on Early Stages of Development of Xenopus laevis., El-Hodiri HM, Kelly LE., Methods Mol Biol. January 1, 2018; 1797 325-335.

Regulation of photoreceptor gene transcription via a highly conserved transcriptional regulatory element by vsx gene products., Pan Y, Comiskey DF, Kelly LE, Chandler DS, El-Hodiri HM., Mol Vis. December 14, 2016; 22 1421-1428.

Xenopus laevis Nkx5.3 and sensory organ homeobox (SOHo) are expressed in developing sensory organs and ganglia of the head and anterior trunk., Kelly LE, El-Hodiri HM., Dev Genes Evol. November 1, 2016; 226 (6): 423-428.

Autoregulation of retinal homeobox (rax) gene promoter activity through a highly conserved genomic element., Kelly LE, Martinez-De Luna RI, El-Hodiri HM., Genesis. November 1, 2016; 54 (11): 562-567.

Expression of the insulinoma-associated 1 (insm1) gene in Xenopus laevis tadpole retina and brain., Bosse JL, El-Hodiri HM., Gene Expr Patterns. September 1, 2016; 22 (1): 26-29.

In vivo functional analysis of transcription factor: response element interaction using transgenic Xenopus laevis., El-Hodiri HM, Pan Y, Kelly LE., Methods Mol Biol. January 1, 2012; 884 41-51.

The Retinal Homeobox (Rx) gene is necessary for retinal regeneration., Martinez-De Luna RI, Kelly LE, El-Hodiri HM., Dev Biol. May 1, 2011; 353 (1): 10-8.

Regulation of retinal homeobox gene transcription by cooperative activity among cis-elements., Martinez-de Luna RI, Moose HE, Kelly LE, Nekkalapudi S, El-Hodiri HM., Gene. November 1, 2010; 467 (1-2): 13-24.

Regulation of photoreceptor gene expression by the retinal homeobox (Rx) gene product., Pan Y, Martinez-De Luna RI, Lou CH, Nekkalapudi S, Kelly LE, Sater AK, El-Hodiri HM., Dev Biol. March 15, 2010; 339 (2): 494-506.

Temporal regulation of Ath5 gene expression during eye development., Willardsen MI, Suli A, Pan Y, Marsh-Armstrong N, Chien CB, El-Hodiri H, Brown NL, Moore KB, Vetter ML., Dev Biol. February 15, 2009; 326 (2): 471-81.

xArx2: an aristaless homolog that regulates brain regionalization during development in Xenopus laevis., Wolanski M, Khosrowshahian F, Kelly LE, El-Hodiri HM, Crawford MJ., Genesis. January 1, 2009; 47 (1): 19-31.

The function of the Aristaless-related homeobox (Arx) gene product as a transcriptional repressor is diminished by mutations associated with X-linked mental retardation (XLMR)., Fullenkamp AN, El-Hodiri HM., Biochem Biophys Res Commun. December 5, 2008; 377 (1): 73-8.

PP2A:B56epsilon is required for eye induction and eye field separation., Rorick AM, Mei W, Liette NL, Phiel C, El-Hodiri HM, Yang J., Dev Biol. February 15, 2007; 302 (2): 477-93.

Expression of the forkhead transcription factor FoxN4 in progenitor cells in the developing Xenopus laevis retina and brain., Kelly LE, Nekkalapudi S, El-Hodiri HM., Gene Expr Patterns. January 1, 2007; 7 (3): 233-8.

The Xenopus ortholog of the nuclear hormone receptor Nr2e3 is primarily expressed in developing photoreceptors., Martinez-De Luna RI, El-Hodiri HM., Int J Dev Biol. January 1, 2007; 51 (3): 235-40.

The Rx-like homeobox gene (Rx-L) is necessary for normal photoreceptor development., Pan Y, Nekkalapudi S, Kelly LE, El-Hodiri HM., Invest Ophthalmol Vis Sci. October 1, 2006; 47 (10): 4245-53.

Pbx1 and Meis1 regulate activity of the Xenopus laevis Zic3 promoter through a highly conserved region., Kelly LE, Carrel TL, Herman GE, El-Hodiri HM., Biochem Biophys Res Commun. June 9, 2006; 344 (3): 1031-7.

Conserved regulatory elements establish the dynamic expression of Rpx/HesxI in early vertebrate development., Chou SJ, Hermesz E, Hatta T, Feltner D, El-Hodiri HM, Jamrich M, Mahon K., Dev Biol. April 15, 2006; 292 (2): 533-45.

Expression of a novel Ski-like gene in Xenopus development., Seufert DW, Hegde RS, Nekkalapudi S, Kelly LE, El-Hodiri HM., Gene Expr Patterns. December 1, 2005; 6 (1): 22-8.

Smad1 and Smad8 function similarly in mammalian central nervous system development., Hester M, Thompson JC, Mills J, Liu Y, El-Hodiri HM, Weinstein M., Mol Cell Biol. June 1, 2005; 25 (11): 4683-92.

Recombineered Xenopus tropicalis BAC expresses a GFP reporter under the control of Arx transcriptional regulatory elements in transgenic Xenopus laevis embryos., Kelly LE, Davy BE, Berbari NF, Robinson ML, El-Hodiri HM., Genesis. April 1, 2005; 41 (4): 185-91.

Xenopus aristaless-related homeobox (xARX) gene product functions as both a transcriptional activator and repressor in forebrain development., Seufert DW, Prescott NL, El-Hodiri HM., Dev Dyn. February 1, 2005; 232 (2): 313-24.

Xenopus laevis FoxE1 is primarily expressed in the developing pituitary and thyroid., El-Hodiri HM, Seufert DW, Nekkalapudi S, Prescott NL, Kelly LE, Jamrich M., Int J Dev Biol. January 1, 2005; 49 (7): 881-4.

Smad2 and Smad3 coordinately regulate craniofacial and endodermal development., Liu Y, Festing M, Thompson JC, Hester M, Rankin S, El-Hodiri HM, Zorn AM, Weinstein M., Dev Biol. June 15, 2004; 270 (2): 411-26.

Regulation of vertebrate eye development by Rx genes., Bailey TJ, El-Hodiri H, Zhang L, Shah R, Mathers PH, Jamrich M., Int J Dev Biol. January 1, 2004; 48 (8-9): 761-70.

Evidence for antagonism of BMP-4 signals by MAP kinase during Xenopus axis determination and neural specification., Sater AK, El-Hodiri HM, Goswami M, Alexander TB, Al-Sheikh O, Etkin LD, Akif Uzman J., Differentiation. September 1, 2003; 71 (7): 434-44.

Targeted expression of the dominant-negative FGFR4a in the eye using Xrx1A regulatory sequences interferes with normal retinal development., Zhang L, El-Hodiri HM, Ma HF, Zhang X, Servetnick M, Wensel TG, Jamrich M., Development. September 1, 2003; 130 (17): 4177-86.

The Xenopus arx gene is expressed in the developing rostral forebrain., El-Hodiri HM, Qi XL, Seufert DW., Dev Genes Evol. January 1, 2003; 212 (12): 608-12.

The role of ZIC3 in vertebrate development., Herman GE, El-Hodiri HM., Cytogenet Genome Res. January 1, 2002; 99 (1-4): 229-35.

Fox (forkhead) genes are involved in the dorso-ventral patterning of the Xenopus mesoderm., El-Hodiri H, Bhatia-Dey N, Kenyon K, Ault K, Dirksen M, Jamrich M., Int J Dev Biol. January 1, 2001; 45 (1): 265-71.

Modules in the photoreceptor RGS9-1.Gbeta 5L GTPase-accelerating protein complex control effector coupling, GTPase acceleration, protein folding, and stability., He W, Lu L, Zhang X, El-Hodiri HM, Chen CK, Slep KC, Simon MI, Jamrich M, Wensel TG., J Biol Chem. November 24, 2000; 275 (47): 37093-100.

Regulation of the pancreatic islet-specific gene BETA2 (neuroD) by neurogenin 3., Huang HP, Liu M, El-Hodiri HM, Chu K, Jamrich M, Tsai MJ., Mol Cell Biol. May 1, 2000; 20 (9): 3292-307.

Identification and cloning of xp95, a putative signal transduction protein in Xenopus oocytes., Che S, El-Hodiri HM, Wu CF, Nelman-Gonzalez M, Weil MM, Etkin LD, Clark RB, Kuang J., J Biol Chem. February 26, 1999; 274 (9): 5522-31.

Mitogen-activated protein kinase and neural specification in Xenopus., Uzgare AR, Uzman JA, El-Hodiri HM, Sater AK., Proc Natl Acad Sci U S A. December 8, 1998; 95 (25): 14833-8.

Characterization and function of Xnf7 during early development of Xenopus., Etkin LD, el-Hodiri HM, Nakamura H, Wu CF, Shou W, Gong SG., J Cell Physiol. November 1, 1997; 173 (2): 144-6.

xnf7 functions in dorsal-ventral patterning of the Xenopus embryo., El-Hodiri HM, Shou W, Etkin LD., Dev Biol. October 1, 1997; 190 (1): 1-17.

Mitogen-activated protein kinase and cyclin B/Cdc2 phosphorylate Xenopus nuclear factor 7 (xnf7) in extracts from mature oocytes. Implications for regulation of xnf7 subcellular localization., El-Hodiri HM, Che S, Nelman-Gonzalez M, Kuang J, Etkin LD., J Biol Chem. August 15, 1997; 272 (33): 20463-70.

Interaction of the CCAAT displacement protein with shared regulatory elements required for transcription of paired histone genes., el-Hodiri HM, Perry M., Mol Cell Biol. July 1, 1995; 15 (7): 3587-96.

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