C. David Allis - Publications

Publications (20)

XB-PERS-1969

Publications By C. David Allis

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The n-SET domain of Set1 regulates H2B ubiquitylation-dependent H3K4 methylation., Kim J, Kim JA, McGinty RK, Nguyen UT, Muir TW, Allis CD, Roeder RG., Mol Cell. March 28, 2013; 49 (6): 1121-33.
Phosphorylation of histone H3 Ser10 establishes a hierarchy for subsequent intramolecular modification events., Liokatis S, Stützer A, Elsässer SJ, Theillet FX, Klingberg R, van Rossum B, Schwarzer D, Allis CD, Fischle W, Selenko P., Nat Struct Mol Biol. August 1, 2012; 19 (8): 819-23.
Histone monoubiquitylation position determines specificity and direction of enzymatic cross-talk with histone methyltransferases Dot1L and PRC2., Whitcomb SJ, Fierz B, McGinty RK, Holt M, Ito T, Muir TW, Allis CD., J Biol Chem. July 6, 2012; 287 (28): 23718-25.
Recognition of a mononucleosomal histone modification pattern by BPTF via multivalent interactions., Ruthenburg AJ, Li H, Milne TA, Dewell S, McGinty RK, Yuen M, Ueberheide B, Dou Y, Muir TW, Patel DJ, Allis CD., Cell. May 27, 2011; 145 (5): 692-706.
Analysis of histones and chromatin in Xenopus laevis egg and oocyte extracts., Banaszynski LA, Allis CD, Shechter D., Methods. May 1, 2010; 51 (1): 3-10.
A distinct H2A.X isoform is enriched in Xenopus laevis eggs and early embryos and is phosphorylated in the absence of a checkpoint., Shechter D, Chitta RK, Xiao A, Shabanowitz J, Hunt DF, Allis CD., Proc Natl Acad Sci U S A. January 20, 2009; 106 (3): 749-54.
Analysis of histones in Xenopus laevis. I. A distinct index of enriched variants and modifications exists in each cell type and is remodeled during developmental transitions., Shechter D, Nicklay JJ, Chitta RK, Shabanowitz J, Hunt DF, Allis CD., J Biol Chem. January 9, 2009; 284 (2): 1064-74.
Analysis of histones in Xenopus laevis. II. mass spectrometry reveals an index of cell type-specific modifications on H3 and H4., Nicklay JJ, Shechter D, Chitta RK, Garcia BA, Shabanowitz J, Allis CD, Hunt DF., J Biol Chem. January 9, 2009; 284 (2): 1075-85.
Extraction, purification and analysis of histones., Shechter D, Dormann HL, Allis CD, Hake SB., Nat Protoc. January 1, 2007; 2 (6): 1445-57.
A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling., Wysocka J, Swigut T, Xiao H, Milne TA, Kwon SY, Landry J, Kauer M, Tackett AJ, Chait BT, Badenhorst P, Wu C, Allis CD., Nature. July 6, 2006; 442 (7098): 86-90.
Regulation of HP1-chromatin binding by histone H3 methylation and phosphorylation., Fischle W, Tseng BS, Dormann HL, Ueberheide BM, Garcia BA, Shabanowitz J, Hunt DF, Funabiki H, Allis CD., Nature. December 22, 2005; 438 (7071): 1116-22.
WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development., Wysocka J, Swigut T, Milne TA, Dou Y, Zhang X, Burlingame AL, Roeder RG, Brivanlou AH, Allis CD., Cell. June 17, 2005; 121 (6): 859-72.
The enhancement of histone H4 and H2A serine 1 phosphorylation during mitosis and S-phase is evolutionarily conserved., Barber CM, Turner FB, Wang Y, Hagstrom K, Taverna SD, Mollah S, Ueberheide B, Meyer BJ, Hunt DF, Cheung P, Allis CD., Chromosoma. May 1, 2004; 112 (7): 360-71.
Involvement of histone methylation and phosphorylation in regulation of transcription by thyroid hormone receptor., Li J, Lin Q, Yoon HG, Huang ZQ, Strahl BD, Allis CD, Wong J., Mol Cell Biol. August 1, 2002; 22 (16): 5688-97.
Methylation of histone H4 at arginine 3 facilitating transcriptional activation by nuclear hormone receptor., Wang H, Huang ZQ, Xia L, Feng Q, Erdjument-Bromage H, Strahl BD, Briggs SD, Allis CD, Wong J, Tempst P, Zhang Y., Science. August 3, 2001; 293 (5531): 853-7.
Chromatin-associated protein phosphatase 1 regulates aurora-B and histone H3 phosphorylation., Murnion ME, Adams RR, Callister DM, Allis CD, Earnshaw WC, Swedlow JR., J Biol Chem. July 13, 2001; 276 (28): 26656-65.
Chromatin docking and exchange activity enhancement of RCC1 by histones H2A and H2B., Nemergut ME, Mizzen CA, Stukenberg T, Allis CD, Macara IG., Science. May 25, 2001; 292 (5521): 1540-3.
Core histone N-termini play an essential role in mitotic chromosome condensation., de la Barre AE, Gerson V, Gout S, Creaven M, Allis CD, Dimitrov S., EMBO J. February 1, 2000; 19 (3): 379-91.
Transcriptionally active Xenopus laevis somatic 5 S ribosomal RNA genes are packaged with hyperacetylated histone H4, whereas transcriptionally silent oocyte genes are not., Howe L, Ranalli TA, Allis CD, Ausió J., J Biol Chem. August 14, 1998; 273 (33): 20693-6.
Analysis of nucleosome assembly and histone exchange using antibodies specific for acetylated H4., Perry CA, Dadd CA, Allis CD, Annunziato AT., Biochemistry. December 14, 1993; 32 (49): 13605-14.

The n-SET domain of Set1 regulates H2B ubiquitylation-dependent H3K4 methylation., Kim J, Kim JA, McGinty RK, Nguyen UT, Muir TW, Allis CD, Roeder RG., Mol Cell. March 28, 2013; 49 (6): 1121-33.

Phosphorylation of histone H3 Ser10 establishes a hierarchy for subsequent intramolecular modification events., Liokatis S, Stützer A, Elsässer SJ, Theillet FX, Klingberg R, van Rossum B, Schwarzer D, Allis CD, Fischle W, Selenko P., Nat Struct Mol Biol. August 1, 2012; 19 (8): 819-23.

Histone monoubiquitylation position determines specificity and direction of enzymatic cross-talk with histone methyltransferases Dot1L and PRC2., Whitcomb SJ, Fierz B, McGinty RK, Holt M, Ito T, Muir TW, Allis CD., J Biol Chem. July 6, 2012; 287 (28): 23718-25.

Recognition of a mononucleosomal histone modification pattern by BPTF via multivalent interactions., Ruthenburg AJ, Li H, Milne TA, Dewell S, McGinty RK, Yuen M, Ueberheide B, Dou Y, Muir TW, Patel DJ, Allis CD., Cell. May 27, 2011; 145 (5): 692-706.

Analysis of histones and chromatin in Xenopus laevis egg and oocyte extracts., Banaszynski LA, Allis CD, Shechter D., Methods. May 1, 2010; 51 (1): 3-10.

A distinct H2A.X isoform is enriched in Xenopus laevis eggs and early embryos and is phosphorylated in the absence of a checkpoint., Shechter D, Chitta RK, Xiao A, Shabanowitz J, Hunt DF, Allis CD., Proc Natl Acad Sci U S A. January 20, 2009; 106 (3): 749-54.

Analysis of histones in Xenopus laevis. I. A distinct index of enriched variants and modifications exists in each cell type and is remodeled during developmental transitions., Shechter D, Nicklay JJ, Chitta RK, Shabanowitz J, Hunt DF, Allis CD., J Biol Chem. January 9, 2009; 284 (2): 1064-74.

Analysis of histones in Xenopus laevis. II. mass spectrometry reveals an index of cell type-specific modifications on H3 and H4., Nicklay JJ, Shechter D, Chitta RK, Garcia BA, Shabanowitz J, Allis CD, Hunt DF., J Biol Chem. January 9, 2009; 284 (2): 1075-85.

Extraction, purification and analysis of histones., Shechter D, Dormann HL, Allis CD, Hake SB., Nat Protoc. January 1, 2007; 2 (6): 1445-57.

A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling., Wysocka J, Swigut T, Xiao H, Milne TA, Kwon SY, Landry J, Kauer M, Tackett AJ, Chait BT, Badenhorst P, Wu C, Allis CD., Nature. July 6, 2006; 442 (7098): 86-90.

Regulation of HP1-chromatin binding by histone H3 methylation and phosphorylation., Fischle W, Tseng BS, Dormann HL, Ueberheide BM, Garcia BA, Shabanowitz J, Hunt DF, Funabiki H, Allis CD., Nature. December 22, 2005; 438 (7071): 1116-22.

WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development., Wysocka J, Swigut T, Milne TA, Dou Y, Zhang X, Burlingame AL, Roeder RG, Brivanlou AH, Allis CD., Cell. June 17, 2005; 121 (6): 859-72.

The enhancement of histone H4 and H2A serine 1 phosphorylation during mitosis and S-phase is evolutionarily conserved., Barber CM, Turner FB, Wang Y, Hagstrom K, Taverna SD, Mollah S, Ueberheide B, Meyer BJ, Hunt DF, Cheung P, Allis CD., Chromosoma. May 1, 2004; 112 (7): 360-71.

Involvement of histone methylation and phosphorylation in regulation of transcription by thyroid hormone receptor., Li J, Lin Q, Yoon HG, Huang ZQ, Strahl BD, Allis CD, Wong J., Mol Cell Biol. August 1, 2002; 22 (16): 5688-97.

Methylation of histone H4 at arginine 3 facilitating transcriptional activation by nuclear hormone receptor., Wang H, Huang ZQ, Xia L, Feng Q, Erdjument-Bromage H, Strahl BD, Briggs SD, Allis CD, Wong J, Tempst P, Zhang Y., Science. August 3, 2001; 293 (5531): 853-7.

Chromatin-associated protein phosphatase 1 regulates aurora-B and histone H3 phosphorylation., Murnion ME, Adams RR, Callister DM, Allis CD, Earnshaw WC, Swedlow JR., J Biol Chem. July 13, 2001; 276 (28): 26656-65.

Chromatin docking and exchange activity enhancement of RCC1 by histones H2A and H2B., Nemergut ME, Mizzen CA, Stukenberg T, Allis CD, Macara IG., Science. May 25, 2001; 292 (5521): 1540-3.

Core histone N-termini play an essential role in mitotic chromosome condensation., de la Barre AE, Gerson V, Gout S, Creaven M, Allis CD, Dimitrov S., EMBO J. February 1, 2000; 19 (3): 379-91.

Transcriptionally active Xenopus laevis somatic 5 S ribosomal RNA genes are packaged with hyperacetylated histone H4, whereas transcriptionally silent oocyte genes are not., Howe L, Ranalli TA, Allis CD, Ausió J., J Biol Chem. August 14, 1998; 273 (33): 20693-6.

Analysis of nucleosome assembly and histone exchange using antibodies specific for acetylated H4., Perry CA, Dadd CA, Allis CD, Annunziato AT., Biochemistry. December 14, 1993; 32 (49): 13605-14.

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