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Summary Stage Literature (2217) Attributions Wiki
XB-STAGE-7

Papers associated with gastrula stage

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Possible regulation of Oct60 transcription by a positive feedback loop in Xenopus oocytes., Morichika K, Sugimoto M, Yasuda K, Kinoshita T., Zygote. May 1, 2014; 1-9.

The evolutionary history of vertebrate cranial placodes II. Evolution of ectodermal patterning., Schlosser G, Patthey C, Shimeld SM., Dev Biol. May 1, 2014; 389 (1): 98-119.   


Setting appropriate boundaries: fate, patterning and competence at the neural plate border., Groves AK, LaBonne C., Dev Biol. May 1, 2014; 389 (1): 2-12.   


Polarized Wnt signaling regulates ectodermal cell fate in Xenopus., Huang YL, Niehrs C., Dev Cell. April 28, 2014; 29 (2): 250-7.   


Quantitative analysis of cell arrangement indicates early differentiation of the neural region during Xenopus gastrulation., Yamashita S, Michiue T., J Theor Biol. April 7, 2014; 346 1-7.

Developmental expression and role of Kinesin Eg5 during Xenopus laevis embryogenesis., Fernández JP, Agüero TH, Vega López GA, Marranzino G, Cerrizuela S, Aybar MJ., Dev Dyn. April 1, 2014; 243 (4): 527-40.   


The Role of Sdf-1α signaling in Xenopus laevis somite morphogenesis., Leal MA, Fickel SR, Sabillo A, Ramirez J, Vergara HM, Nave C, Saw D, Domingo CR., Dev Dyn. April 1, 2014; 243 (4): 509-26.   


The evolution and conservation of left-right patterning mechanisms., Blum M, Feistel K, Thumberger T, Schweickert A., Development. April 1, 2014; 141 (8): 1603-13.   


Ras-dva1 small GTPase regulates telencephalon development in Xenopus laevis embryos by controlling Fgf8 and Agr signaling at the anterior border of the neural plate., Tereshina MB, Ermakova GV, Ivanova AS, Zaraisky AG., Biol Open. March 15, 2014; 3 (3): 192-203.   


Novel animal pole-enriched maternal mRNAs are preferentially expressed in neural ectoderm., Grant PA, Yan B, Johnson MA, Johnson DL, Moody SA., Dev Dyn. March 1, 2014; 243 (3): 478-96.   


Expression and localization of Rdd proteins in Xenopus embryo., Lim JC, Kurihara S, Tamaki R, Mashima Y, Maéno M., Anat Cell Biol. March 1, 2014; 47 (1): 18-27.   


The Prdm13 histone methyltransferase encoding gene is a Ptf1a-Rbpj downstream target that suppresses glutamatergic and promotes GABAergic neuronal fate in the dorsal neural tube., Hanotel J, Bessodes N, Thélie A, Hedderich M, Parain K, Van Driessche B, Brandão Kde O, Kricha S, Jorgensen MC, Grapin-Botton A, Serup P, Van Lint C, Perron M, Pieler T, Henningfeld KA, Bellefroid EJ., Dev Biol. February 15, 2014; 386 (2): 340-57.   


Time-lapse X-ray phase-contrast microtomography for in vivo imaging and analysis of morphogenesis., Moosmann J, Ershov A, Weinhardt V, Baumbach T, Prasad MS, LaBonne C, Xiao X, Kashef J, Hofmann R., Nat Protoc. February 1, 2014; 9 (2): 294-304.   


Commitment to nutritional endoderm in Eleutherodactylus coqui involves altered nodal signaling and global transcriptional repression., Chatterjee S, Elinson RP., J Exp Zool B Mol Dev Evol. January 1, 2014; 322 (1): 27-44.

Small RNA profiling of Xenopus embryos reveals novel miRNAs and a new class of small RNAs derived from intronic transposable elements., Harding JL, Horswell S, Heliot C, Armisen J, Zimmerman LB, Luscombe NM, Miska EA, Hill CS., Genome Res. January 1, 2014; 24 (1): 96-106.

PTK7 modulates Wnt signaling activity via LRP6., Bin-Nun N, Lichtig H, Malyarova A, Levy M, Elias S, Frank D., Development. January 1, 2014; 141 (2): 410-21.   


Expression cloning of camelid nanobodies specific for Xenopus embryonic antigens., Itoh K, Sokol SY., PLoS One. January 1, 2014; 9 (10): e107521.   


Two different vestigial like 4 genes are differentially expressed during Xenopus laevis development., Barrionuevo MG, Aybar MJ, Aybar MJ, Tríbulo C., Int J Dev Biol. January 1, 2014; 58 (5): 369-77.   


Differential expression of arid5b isoforms in Xenopus laevis pronephros., Le Bouffant R, Cunin AC, Buisson I, Cartry J, Riou JF, Umbhauer M., Int J Dev Biol. January 1, 2014; 58 (5): 363-8.   


Expression pattern of zcchc24 during early Xenopus development., Vitorino M, Correia E, Serralheiro AR, De-Jesus AC, Inácio JM, Belo JA., Int J Dev Biol. January 1, 2014; 58 (1): 45-50.   


Vertical signalling involves transmission of Hox information from gastrula mesoderm to neurectoderm., Bardine N, Lamers G, Wacker S, Donow C, Knoechel W, Durston A., PLoS One. January 1, 2014; 9 (12): e115208.   


Optogenetics in Developmental Biology: using light to control ion flux-dependent signals in Xenopus embryos., Spencer Adams D, Lemire JM, Kramer RH, Levin M., Int J Dev Biol. January 1, 2014; 58 (10-12): 851-61.   


Epithelial cell division in the Xenopus laevis embryo during gastrulation., Hatte G, Tramier M, Prigent C, Tassan JP., Int J Dev Biol. January 1, 2014; 58 (10-12): 775-81.   


Ephrin-Eph signaling in embryonic tissue separation., Fagotto F, Winklbauer R, Rohani N., Cell Adh Migr. January 1, 2014; 8 (4): 308-26.   


Chordin forms a self-organizing morphogen gradient in the extracellular space between ectoderm and mesoderm in the Xenopus embryo., Plouhinec JL, Zakin L, Moriyama Y, De Robertis EM., Proc Natl Acad Sci U S A. December 17, 2013; 110 (51): 20372-9.   


PPARβ interprets a chromatin signature of pluripotency to promote embryonic differentiation at gastrulation., Rotman N, Guex N, Gouranton E, Wahli W., PLoS One. December 9, 2013; 8 (12): e83300.   


SAMS, a syndrome of short stature, auditory-canal atresia, mandibular hypoplasia, and skeletal abnormalities is a unique neurocristopathy caused by mutations in Goosecoid., Parry DA, Logan CV, Stegmann AP, Abdelhamed ZA, Calder A, Khan S, Bonthron DT, Clowes V, Sheridan E, Ghali N, Chudley AE, Dobbie A, Stumpel CT, Johnson CA., Am J Hum Genet. December 5, 2013; 93 (6): 1135-42.   


Calpain2 protease: A new member of the Wnt/Ca(2+) pathway modulating convergent extension movements in Xenopus., Zanardelli S, Christodoulou N, Skourides PA., Dev Biol. December 1, 2013; 384 (1): 83-100.   


The Xenopus homologue of Down syndrome critical region protein 6 drives dorsoanterior gene expression and embryonic axis formation by antagonising polycomb group proteins., Li HY, Grifone R, Saquet A, Carron C, Shi DL., Development. December 1, 2013; 140 (24): 4903-13.   


A secreted splice variant of the Xenopus frizzled-4 receptor is a biphasic modulator of Wnt signalling., Gorny AK, Kaufmann LT, Swain RK, Steinbeisser H., Cell Commun Signal. November 19, 2013; 11 89.   


A conserved Oct4/POUV-dependent network links adhesion and migration to progenitor maintenance., Livigni A, Peradziryi H, Sharov AA, Chia G, Hammachi F, Migueles RP, Sukparangsi W, Pernagallo S, Bradley M, Nichols J, Ko MSH, Brickman JM., Curr Biol. November 18, 2013; 23 (22): 2233-2244.   


Characterization of the nutritional endoderm in the direct developing frog Eleutherodactylus coqui., Karadge U, Elinson RP., Dev Genes Evol. November 1, 2013; 223 (6): 351-62.

Planar cell polarity proteins differentially regulate extracellular matrix organization and assembly during zebrafish gastrulation., Dohn MR, Mundell NA, Sawyer LM, Dunlap JA, Jessen JR., Dev Biol. November 1, 2013; 383 (1): 39-51.

The distribution of Dishevelled in convergently extending mesoderm., Panousopoulou E, Tyson RA, Bretschneider T, Green JB., Dev Biol. October 15, 2013; 382 (2): 496-503.   


Par6b regulates the dynamics of apicobasal polarity during development of the stratified Xenopus epidermis., Wang S, Cha SW, Zorn AM, Wylie C., PLoS One. October 8, 2013; 8 (10): e76854.   


Pfkfb (6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase) isoforms display a tissue-specific and dynamic expression during Xenopus laevis development., Pegoraro C, Maczkowiak F, Monsoro-Burq AH., Gene Expr Patterns. October 1, 2013; 13 (7): 203-11.   


Developmental mechanisms directing early anterior forebrain specification in vertebrates., Andoniadou CL, Martinez-Barbera JP., Cell Mol Life Sci. October 1, 2013; 70 (20): 3739-52.   


Coco regulates dorsoventral specification of germ layers via inhibition of TGFβ signalling., Bates TJ, Vonica A, Heasman J, Brivanlou AH, Bell E., Development. October 1, 2013; 140 (20): 4177-81.   


RAB8B is required for activity and caveolar endocytosis of LRP6., Demir K, Kirsch N, Beretta CA, Erdmann G, Ingelfinger D, Moro E, Argenton F, Carl M, Niehrs C, Boutros M., Cell Rep. September 26, 2013; 4 (6): 1224-34.   


In vivo T-box transcription factor profiling reveals joint regulation of embryonic neuromesodermal bipotency., Gentsch GE, Owens ND, Martin SR, Piccinelli P, Faial T, Trotter MW, Gilchrist MJ, Smith JC., Cell Rep. September 26, 2013; 4 (6): 1185-96.   


The human PDZome: a gateway to PSD95-Disc large-zonula occludens (PDZ)-mediated functions., Belotti E, Polanowska J, Daulat AM, Audebert S, Thomé V, Lissitzky JC, Lembo F, Blibek K, Omi S, Lenfant N, Gangar A, Montcouquiol M, Santoni MJ, Sebbagh M, Aurrand-Lions M, Angers S, Kodjabachian L, Reboul J, Borg JP., Mol Cell Proteomics. September 1, 2013; 12 (9): 2587-603.   


Mutually exclusive signaling signatures define the hepatic and pancreatic progenitor cell lineage divergence., Rodríguez-Seguel E, Mah N, Naumann H, Pongrac IM, Cerdá-Esteban N, Fontaine JF, Wang Y, Chen W, Andrade-Navarro MA, Spagnoli FM., Genes Dev. September 1, 2013; 27 (17): 1932-46.   


Cell-cycle dependent localization of MELK and its new partner RACK1 in epithelial versus mesenchyme-like cells in Xenopus embryo., Chartrain I, Le Page Y, Hatte G, Körner R, Kubiak JZ, Tassan JP., Biol Open. August 21, 2013; 2 (10): 1037-48.   


Development: scaling to size by protease inhibition., De Robertis EM, Colozza G., Curr Biol. August 5, 2013; 23 (15): R652-4.   


MRAS GTPase is a novel stemness marker that impacts mouse embryonic stem cell plasticity and Xenopus embryonic cell fate., Mathieu ME, Faucheux C, Saucourt C, Soulet F, Gauthereau X, Fédou S, Trouillas M, Thézé N, Thiébaud P, Boeuf H., Development. August 1, 2013; 140 (16): 3311-22.   


Three calcium-sensitive genes, fus, brd3 and wdr5, are highly expressed in neural and renal territories during amphibian development., Bibonne A, Néant I, Batut J, Leclerc C, Moreau M, Gilbert T., Biochim Biophys Acta. July 1, 2013; 1833 (7): 1665-71.   


On becoming neural: what the embryo can tell us about differentiating neural stem cells., Moody SA, Klein SL, Karpinski BA, Maynard TM, Lamantia AS., Am J Stem Cells. June 30, 2013; 2 (2): 74-94.   


Scaling of dorsal-ventral patterning by embryo size-dependent degradation of Spemann's organizer signals., Inomata H, Shibata T, Haraguchi T, Sasai Y., Cell. June 6, 2013; 153 (6): 1296-311.   


WNK4 is an essential effector of anterior formation in FGF signaling., Shimizu M, Goto T, Sato A, Shibuya H., Genes Cells. June 1, 2013; 18 (6): 442-9.   


Different thresholds of Wnt-Frizzled 7 signaling coordinate proliferation, morphogenesis and fate of endoderm progenitor cells., Zhang Z, Rankin SA, Zorn AM., Dev Biol. June 1, 2013; 378 (1): 1-12.   

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