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Summary Anatomy Item Literature (6278) Expression Attributions Wiki
XB-ANAT-475

Papers associated with primary germ layer (and ventx1)

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Cdx1 and Gsc distinctly regulate the transcription of BMP4 target gene ventx3.2 by directly binding to the proximal promoter region in Xenopus gastrulae., Goutam RS., Mol Cells. March 22, 2024; 100058.                        


Membrane potential drives the exit from pluripotency and cell fate commitment via calcium and mTOR., Sempou E., Nat Commun. November 5, 2022; 13 (1): 6681.                                            


Lysosomes are required for early dorsal signaling in the Xenopus embryo., Tejeda-Muñoz N., Proc Natl Acad Sci U S A. April 26, 2022; 119 (17): e2201008119.                          


Reduced Retinoic Acid Signaling During Gastrulation Induces Developmental Microcephaly., Gur M., Front Cell Dev Biol. January 1, 2022; 10 844619.                        


Goosecoid Controls Neuroectoderm Specification via Dual Circuits of Direct Repression and Indirect Stimulation in Xenopus Embryos., Umair Z., Mol Cells. October 31, 2021; 44 (10): 723-735.          


Rab7 is required for mesoderm patterning and gastrulation in Xenopus., Kreis J., Biol Open. July 15, 2021; 10 (7):                                           


Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., Bright AR., EMBO J. May 3, 2021; 40 (9): e104913.                        


Dusp1 modulates activin/smad2 mediated germ layer specification via FGF signal inhibition in Xenopus embryos., Umair Z., Anim Cells Syst (Seoul). November 27, 2020; 24 (6): 359-370.            


Foxd4l1.1 negatively regulates transcription of neural repressor ventx1.1 during neuroectoderm formation in Xenopus embryos., Kumar S, Kumar S., Sci Rep. October 8, 2020; 10 (1): 16780.            


Ventx1.1 competes with a transcriptional activator Xcad2 to regulate negatively its own expression., Kumar S, Kumar S., BMB Rep. June 1, 2019; 52 (6): 403-408.                


Ventx1.1 as a Direct Repressor of Early Neural Gene zic3 in Xenopus laevis., Umair Z., Mol Cells. December 31, 2018; 41 (12): 1061-1071.          


RAPGEF5 Regulates Nuclear Translocation of β-Catenin., Griffin JN., Dev Cell. January 22, 2018; 44 (2): 248-260.e4.                                                


Lineage commitment of embryonic cells involves MEK1-dependent clearance of pluripotency regulator Ventx2., Scerbo P., Elife. June 27, 2017; 6                               


Genome-wide analysis of dorsal and ventral transcriptomes of the Xenopus laevis gastrula., Ding Y., Dev Biol. June 15, 2017; 426 (2): 176-187.                                  


Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing., Popov IK., Dev Biol. June 15, 2017; 426 (2): 429-441.                    


A catalog of Xenopus tropicalis transcription factors and their regional expression in the early gastrula stage embryo., Blitz IL., Dev Biol. June 15, 2017; 426 (2): 409-417.        


A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs., Charney RM., Semin Cell Dev Biol. June 1, 2017; 66 12-24.    


Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula transition., Wagner G., PLoS Genet. May 12, 2017; 13 (5): e1006757.                                    


Genomic integration of Wnt/β-catenin and BMP/Smad1 signaling coordinates foregut and hindgut transcriptional programs., Stevens ML., Development. April 1, 2017; 144 (7): 1283-1295.                            


Specification of anteroposterior axis by combinatorial signaling during Xenopus development., Carron C., Wiley Interdiscip Rev Dev Biol. January 1, 2016; 5 (2): 150-68.            


Small C-terminal Domain Phosphatase 3 Dephosphorylates the Linker Sites of Receptor-regulated Smads (R-Smads) to Ensure Transforming Growth Factor β (TGFβ)-mediated Germ Layer Induction in Xenopus Embryos., Sun G., J Biol Chem. July 10, 2015; 290 (28): 17239-49.                  


Kdm2a/b Lysine Demethylases Regulate Canonical Wnt Signaling by Modulating the Stability of Nuclear β-Catenin., Lu L., Dev Cell. June 22, 2015; 33 (6): 660-74.                                  


E2a is necessary for Smad2/3-dependent transcription and the direct repression of lefty during gastrulation., Wills AE., Dev Cell. February 9, 2015; 32 (3): 345-57.                  


Xenopus laevis FGF receptor substrate 3 (XFrs3) is important for eye development and mediates Pax6 expression in lens placode through its Shp2-binding sites., Kim YJ., Dev Biol. January 1, 2015; 397 (1): 129-39.                                          


PV.1 induced by FGF-Xbra functions as a repressor of neurogenesis in Xenopus embryos., Yoon J., BMB Rep. December 1, 2014; 47 (12): 673-8.        


Fezf2 promotes neuronal differentiation through localised activation of Wnt/β-catenin signalling during forebrain development., Zhang S., Development. December 1, 2014; 141 (24): 4794-805.                            


Gtpbp2 is required for BMP signaling and mesoderm patterning in Xenopus embryos., Kirmizitas A., Dev Biol. August 15, 2014; 392 (2): 358-67.                                


Two different network topologies yield bistability in models of mesoderm and anterior mesendoderm specification in amphibians., Brown LE., J Theor Biol. July 21, 2014; 353 67-77.                    


Occupancy of tissue-specific cis-regulatory modules by Otx2 and TLE/Groucho for embryonic head specification., Yasuoka Y., Nat Commun. July 9, 2014; 5 4322.        


Zygotic expression of Exostosin1 (Ext1) is required for BMP signaling and establishment of dorsal-ventral pattern in Xenopus., Shieh YE., Int J Dev Biol. January 1, 2014; 58 (1): 27-34.          


AP-1(c-Jun/FosB) mediates xFoxD5b expression in Xenopus early developmental neurogenesis., Yoon J., Int J Dev Biol. January 1, 2013; 57 (11-12): 865-72.        


Suppression of Bmp4 signaling by the zinc-finger repressors Osr1 and Osr2 is required for Wnt/β-catenin-mediated lung specification in Xenopus., Rankin SA, Rankin SA., Development. August 1, 2012; 139 (16): 3010-20.                                                                                


TAK1 promotes BMP4/Smad1 signaling via inhibition of erk MAPK: a new link in the FGF/BMP regulatory network., Liu C., Differentiation. April 1, 2012; 83 (4): 210-9.                  


Transient expression of Ngn3 in Xenopus endoderm promotes early and ectopic development of pancreatic beta and delta cells., Oropeza D., Genesis. March 1, 2012; 50 (3): 271-85.                        


Ventx factors function as Nanog-like guardians of developmental potential in Xenopus., Scerbo P., PLoS One. January 1, 2012; 7 (5): e36855.              


Inhibition of FGF signaling converts dorsal mesoderm to ventral mesoderm in early Xenopus embryos., Lee SY., Differentiation. September 1, 2011; 82 (2): 99-107.                    


xCITED2 Induces Neural Genes in Animal Cap Explants of Xenopus Embryos., Yoon J., Exp Neurobiol. September 1, 2011; 20 (3): 123-9.        


Conservation and diversification of an ancestral chordate gene regulatory network for dorsoventral patterning., Kozmikova I., PLoS One. February 3, 2011; 6 (2): e14650.                  


The function of heterodimeric AP-1 comprised of c-Jun and c-Fos in activin mediated Spemann organizer gene expression., Lee SY., PLoS One. January 1, 2011; 6 (7): e21796.              


Identification of a novel negative regulator of activin/nodal signaling in mesendodermal formation of Xenopus embryos., Cheong SM., J Biol Chem. June 19, 2009; 284 (25): 17052-60.                        


Identification of novel transcripts with differential dorso-ventral expression in Xenopus gastrula using serial analysis of gene expression., Faunes F., Genome Biol. February 11, 2009; 10 (2): R15.                    


Genetic screens for mutations affecting development of Xenopus tropicalis., Goda T., PLoS Genet. June 1, 2006; 2 (6): e91.                        


Regulation of ADMP and BMP2/4/7 at opposite embryonic poles generates a self-regulating morphogenetic field., Reversade B., Cell. December 16, 2005; 123 (6): 1147-60.                      


Microarray-based identification of VegT targets in Xenopus., Taverner NV., Mech Dev. March 1, 2005; 122 (3): 333-54.                                          


PP2A:B56epsilon is required for Wnt/beta-catenin signaling during embryonic development., Yang J., Development. December 1, 2003; 130 (23): 5569-78.            


Active repression of organizer genes by C-terminal domain of PV.1., Hwang YS., Biochem Biophys Res Commun. August 15, 2003; 308 (1): 79-86.          


A study of mesoderm patterning through the analysis of the regulation of Xmyf-5 expression., Polli M., Development. June 1, 2002; 129 (12): 2917-27.        


Antimorphic PV.1 causes secondary axis by inducing ectopic organizer., Hwang YS., Biochem Biophys Res Commun. April 12, 2002; 292 (4): 1081-6.        


Action range of BMP is defined by its N-terminal basic amino acid core., Ohkawara B., Curr Biol. February 5, 2002; 12 (3): 205-9.          


Siamois functions in the early blastula to induce Spemann's organiser., Kodjabachian L., Mech Dev. October 1, 2001; 108 (1-2): 71-9.          

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