Papers associated with primary germ layer (and mixer)

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	Membrane potential drives the exit from pluripotency and cell fate commitment via calcium and mTOR., Sempou E., Nat Commun. November 5, 2022; 13 (1): 6681.
	Nascent transcriptome reveals orchestration of zygotic genome activation in early embryogenesis., Chen H., Curr Biol. October 10, 2022; 32 (19): 4314-4324.e7.
	Uncovering the mesendoderm gene regulatory network through multi-omic data integration., Jansen C., Cell Rep. February 15, 2022; 38 (7): 110364.
	Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., Bright AR., EMBO J. May 3, 2021; 40 (9): e104913.
	Modeling endoderm development and disease in Xenopus., Edwards NA., Curr Top Dev Biol. January 1, 2021; 145 61-90.
	Dusp1 modulates activin/smad2 mediated germ layer specification via FGF signal inhibition in Xenopus embryos., Umair Z., Anim Cells Syst (Seoul). November 27, 2020; 24 (6): 359-370.
	Endodermal Maternal Transcription Factors Establish Super-Enhancers during Zygotic Genome Activation., Paraiso KD., Cell Rep. June 4, 2019; 27 (10): 2962-2977.e5.
	AKT signaling displays multifaceted functions in neural crest development., Sittewelle M., Dev Biol. December 1, 2018; 444 Suppl 1 S144-S155.
	Nodal/Activin Pathway is a Conserved Neural Induction Signal in Chordates., Le Petillon Y., Nat Ecol Evol. August 1, 2017; 1 (8): 1192-1200.
	Lineage commitment of embryonic cells involves MEK1-dependent clearance of pluripotency regulator Ventx2., Scerbo P., Elife. June 27, 2017; 6
	A catalog of Xenopus tropicalis transcription factors and their regional expression in the early gastrula stage embryo., Blitz IL., Dev Biol. June 15, 2017; 426 (2): 409-417.
	A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs., Charney RM., Semin Cell Dev Biol. June 1, 2017; 66 12-24.
	Ascl1 represses the mesendoderm induction in Xenopus., Min Z., Acta Biochim Biophys Sin (Shanghai). November 1, 2016; 48 (11): 1006-1015.
	A novel role for Ascl1 in the regulation of mesendoderm formation via HDAC-dependent antagonism of VegT., Gao L., Development. February 1, 2016; 143 (3): 492-503.
	Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development., Owens ND., Cell Rep. January 26, 2016; 14 (3): 632-47.
	Sebox regulates mesoderm formation in early amphibian embryos., Chen G., Dev Dyn. November 1, 2015; 244 (11): 1415-26.
	PV.1 induced by FGF-Xbra functions as a repressor of neurogenesis in Xenopus embryos., Yoon J., BMB Rep. December 1, 2014; 47 (12): 673-8.
	Genome-wide view of TGFβ/Foxh1 regulation of the early mesendoderm program., Chiu WT., Development. December 1, 2014; 141 (23): 4537-47.
	Gtpbp2 is required for BMP signaling and mesoderm patterning in Xenopus embryos., Kirmizitas A., Dev Biol. August 15, 2014; 392 (2): 358-67.
	Two different network topologies yield bistability in models of mesoderm and anterior mesendoderm specification in amphibians., Brown LE., J Theor Biol. July 21, 2014; 353 67-77.
	Inference of the Xenopus tropicalis embryonic regulatory network and spatial gene expression patterns., Zheng Z., BMC Syst Biol. January 8, 2014; 8 3.
	The Xenopus Tgfbi is required for embryogenesis through regulation of canonical Wnt signalling., Wang F., Dev Biol. July 1, 2013; 379 (1): 16-27.
	Klf4 is required for germ-layer differentiation and body axis patterning during Xenopus embryogenesis., Cao Q., Development. November 1, 2012; 139 (21): 3950-61.
	Conservation and evolutionary divergence in the activity of receptor-regulated smads., Sorrentino GM., Evodevo. October 1, 2012; 3 (1): 22.
	The Mix family of homeobox genes--key regulators of mesendoderm formation during vertebrate development., Pereira LA., Dev Biol. July 15, 2012; 367 (2): 163-77.
	A developmental requirement for HIRA-dependent H3.3 deposition revealed at gastrulation in Xenopus., Szenker E., Cell Rep. June 28, 2012; 1 (6): 730-40.
	Dynamic in vivo binding of transcription factors to cis-regulatory modules of cer and gsc in the stepwise formation of the Spemann-Mangold organizer., Sudou N., Development. May 1, 2012; 139 (9): 1651-61.
	Xenopus Nanos1 is required to prevent endoderm gene expression and apoptosis in primordial germ cells., Lai F., Development. April 1, 2012; 139 (8): 1476-86.
	Transcriptional activation by Oct4 is sufficient for the maintenance and induction of pluripotency., Hammachi F., Cell Rep. February 23, 2012; 1 (2): 99-109.
	Ventx factors function as Nanog-like guardians of developmental potential in Xenopus., Scerbo P., PLoS One. January 1, 2012; 7 (5): e36855.
	KDEL tagging: a method for generating dominant-negative inhibitors of the secretion of TGF-beta superfamily proteins., Matsukawa S., Int J Dev Biol. January 1, 2012; 56 (5): 351-6.
	mNanog possesses dorsal mesoderm-inducing ability by modulating both BMP and Activin/nodal signaling in Xenopus ectodermal cells., Miyazaki A., PLoS One. January 1, 2012; 7 (10): e46630.
	An essential role for transcription before the MBT in Xenopus laevis., Skirkanich J., Dev Biol. September 15, 2011; 357 (2): 478-91.
	xCITED2 Induces Neural Genes in Animal Cap Explants of Xenopus Embryos., Yoon J., Exp Neurobiol. September 1, 2011; 20 (3): 123-9.
	HEB and E2A function as SMAD/FOXH1 cofactors., Yoon SJ., Genes Dev. August 1, 2011; 25 (15): 1654-61.
	Negative autoregulation of Oct3/4 through Cdx1 promotes the onset of gastrulation., Rousso SZ., Dev Dyn. April 1, 2011; 240 (4): 796-807.
	Early activation of FGF and nodal pathways mediates cardiac specification independently of Wnt/beta-catenin signaling., Samuel LJ., PLoS One. October 28, 2009; 4 (10): e7650.
	CDK9/cyclin complexes modulate endoderm induction by direct interaction with Mix.3/mixer., Zhu H., Dev Dyn. June 1, 2009; 238 (6): 1346-57.
	Bmp signaling is necessary and sufficient for ventrolateral endoderm specification in Xenopus., Wills A., Dev Dyn. August 1, 2008; 237 (8): 2177-86.
	Retinoic acid-mediated patterning of the pre-pancreatic endoderm in Xenopus operates via direct and indirect mechanisms., Pan FC., Mech Dev. August 1, 2007; 124 (7-8): 518-31.
	Xenopus glucose transporter 1 (xGLUT1) is required for gastrulation movement in Xenopus laevis., Suzawa K., Int J Dev Biol. January 1, 2007; 51 (3): 183-90.
	FoxD3 regulation of Nodal in the Spemann organizer is essential for Xenopus dorsal mesoderm development., Steiner AB., Development. December 1, 2006; 133 (24): 4827-38.
	Hex acts with beta-catenin to regulate anteroposterior patterning via a Groucho-related co-repressor and Nodal., Zamparini AL., Development. September 1, 2006; 133 (18): 3709-22.
	Conserved roles for Oct4 homologues in maintaining multipotency during early vertebrate development., Morrison GM., Development. May 1, 2006; 133 (10): 2011-22.
	Global analysis of the transcriptional network controlling Xenopus endoderm formation., Sinner D., Development. May 1, 2006; 133 (10): 1955-66.
	The RNA-binding protein, Vg1RBP, is required for pancreatic fate specification., Spagnoli FM., Dev Biol. April 15, 2006; 292 (2): 442-56.
	A novel Cripto-related protein reveals an essential role for EGF-CFCs in Nodal signalling in Xenopus embryos., Dorey K., Dev Biol. April 15, 2006; 292 (2): 303-16.
	Emilin1 links TGF-beta maturation to blood pressure homeostasis., Zacchigna L., Cell. March 10, 2006; 124 (5): 929-42.
	Cooperative non-cell and cell autonomous regulation of Nodal gene expression and signaling by Lefty/Antivin and Brachyury in Xenopus., Cha YR., Dev Biol. February 15, 2006; 290 (2): 246-64.
	Genomic profiling of mixer and Sox17beta targets during Xenopus endoderm development., Dickinson K., Dev Dyn. February 1, 2006; 235 (2): 368-81.

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