Papers associated with primary germ layer (and bix1.1)

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	Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions., Johnson K., BMC Genomics. October 23, 2022; 23 (1): 723.
	Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network., Mukherjee S., Elife. September 7, 2020; 9
	A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs., Charney RM., Semin Cell Dev Biol. June 1, 2017; 66 12-24.
	Genome-wide view of TGFβ/Foxh1 regulation of the early mesendoderm program., Chiu WT., Development. December 1, 2014; 141 (23): 4537-47.
	Inference of the Xenopus tropicalis embryonic regulatory network and spatial gene expression patterns., Zheng Z., BMC Syst Biol. January 8, 2014; 8 3.
	The Mix family of homeobox genes--key regulators of mesendoderm formation during vertebrate development., Pereira LA., Dev Biol. July 15, 2012; 367 (2): 163-77.
	fus/TLS orchestrates splicing of developmental regulators during gastrulation., Dichmann DS., Genes Dev. June 15, 2012; 26 (12): 1351-63.
	Global analysis of the transcriptional network controlling Xenopus endoderm formation., Sinner D., Development. May 1, 2006; 133 (10): 1955-66.
	Inhibition of neurogenesis by SRp38, a neuroD-regulated RNA-binding protein., Liu KJ, Liu KJ., Development. April 1, 2005; 132 (7): 1511-23.
	Identification of novel genes affecting mesoderm formation and morphogenesis through an enhanced large scale functional screen in Xenopus., Chen JA., Mech Dev. March 1, 2005; 122 (3): 307-31.
	Regulation of apoptosis in theXenopus embryo by Bix3., Trindade M., Development. October 1, 2003; 130 (19): 4611-22.
	Molecular components of the endoderm specification pathway in Xenopus tropicalis., D'Souza A., Dev Dyn. January 1, 2003; 226 (1): 118-27.
	Xenopus Brachyury regulates mesodermal expression of Zic3, a gene controlling left-right asymmetry., Kitaguchi T., Dev Growth Differ. February 1, 2002; 44 (1): 55-61.
	Making mesoderm--upstream and downstream of Xbra., Smith JC., Int J Dev Biol. January 1, 2001; 45 (1): 219-24.
	Maternal VegT is the initiator of a molecular network specifying endoderm in Xenopus laevis., Xanthos JB., Development. January 1, 2001; 128 (2): 167-80.
	A screen for targets of the Xenopus T-box gene Xbra., Saka Y., Mech Dev. May 1, 2000; 93 (1-2): 27-39.
	Homeodomain and winged-helix transcription factors recruit activated Smads to distinct promoter elements via a common Smad interaction motif., Germain S., Genes Dev. February 15, 2000; 14 (4): 435-51.
	Bix1, a direct target of Xenopus T-box genes, causes formation of ventral mesoderm and endoderm., Tada M., Development. October 1, 1998; 125 (20): 3997-4006.

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