Papers associated with primary germ layer (and foxa2)

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	Retinoic acid control of pax8 during renal specification of Xenopus pronephros involves hox and meis3., Durant-Vesga J., Dev Biol. January 1, 2023; 493 17-28.
	The homeodomain transcription factor Ventx2 regulates respiratory progenitor cell number and differentiation timing during Xenopus lung development., Rankin SA, Rankin SA., Dev Growth Differ. September 1, 2022; 64 (7): 347-361.
	Engagement of Foxh1 in chromatin regulation revealed by protein interactome analyses., Zhou JJ., Dev Growth Differ. August 1, 2022; 64 (6): 297-305.
	HMCES modulates the transcriptional regulation of nodal/activin and BMP signaling in mESCs., Liang T., Cell Rep. July 12, 2022; 40 (2): 111038.
	Uncovering the mesendoderm gene regulatory network through multi-omic data integration., Jansen C., Cell Rep. February 15, 2022; 38 (7): 110364.
	Modeling endoderm development and disease in Xenopus., Edwards NA., Curr Top Dev Biol. January 1, 2021; 145 61-90.
	Generation of a FOXH1 homozygous knockout human embryonic stem cell line by CRISPR/Cas9 system., Zhang T., Stem Cell Res. December 10, 2020; 50 102121.
	TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis., Chen M., Elife. September 14, 2020; 9
	Endosome-Mediated Epithelial Remodeling Downstream of Hedgehog-Gli Is Required for Tracheoesophageal Separation., Nasr T., Dev Cell. December 16, 2019; 51 (6): 665-674.e6.
	Endodermal Maternal Transcription Factors Establish Super-Enhancers during Zygotic Genome Activation., Paraiso KD., Cell Rep. June 4, 2019; 27 (10): 2962-2977.e5.
	Xenopus slc7a5 is essential for notochord function and eye development., Katada T., Mech Dev. February 1, 2019; 155 48-59.
	Liver Specification in the Absence of Cardiac Differentiation Revealed by Differential Sensitivity to Wnt/β Catenin Pathway Activation., Haworth K., Front Physiol. January 1, 2019; 10 155.
	Maternal Gdf3 is an obligatory cofactor in Nodal signaling for embryonic axis formation in zebrafish., Bisgrove BW., Elife. November 15, 2017; 6
	Id genes are essential for early heart formation., Cunningham TJ., Genes Dev. July 1, 2017; 31 (13): 1325-1338.
	A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs., Charney RM., Semin Cell Dev Biol. June 1, 2017; 66 12-24.
	The histone methyltransferase Setd7 promotes pancreatic progenitor identity., Kofent J., Development. October 1, 2016; 143 (19): 3573-3581.
	A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification., Rankin SA, Rankin SA., Cell Rep. June 28, 2016; 16 (1): 66-78.
	At new heights - endodermal lineages in development and disease., Ober EA., Development. June 1, 2015; 142 (11): 1912-1917.
	E2a is necessary for Smad2/3-dependent transcription and the direct repression of lefty during gastrulation., Wills AE., Dev Cell. February 9, 2015; 32 (3): 345-57.
	A Molecular atlas of Xenopus respiratory system development., Rankin SA, Rankin SA., Dev Dyn. January 1, 2015; 244 (1): 69-85.
	Recessive mutations in PCBD1 cause a new type of early-onset diabetes., Simaite D., Diabetes. October 1, 2014; 63 (10): 3557-64.
	Gene regulatory networks governing lung specification., Rankin SA, Rankin SA., J Cell Biochem. August 1, 2014; 115 (8): 1343-50.
	Hhex and Cer1 mediate the Sox17 pathway for cardiac mesoderm formation in embryonic stem cells., Liu Y., Stem Cells. June 1, 2014; 32 (6): 1515-26.
	Inference of the Xenopus tropicalis embryonic regulatory network and spatial gene expression patterns., Zheng Z., BMC Syst Biol. January 8, 2014; 8 3.
	FoxA4 favours notochord formation by inhibiting contiguous mesodermal fates and restricts anterior neural development in Xenopus embryos., Murgan S., PLoS One. January 1, 2014; 9 (10): e110559.
	TBX3 Directs Cell-Fate Decision toward Mesendoderm., Weidgang CE., Stem Cell Reports. August 29, 2013; 1 (3): 248-65.
	The cytoskeletal protein Zyxin inhibits Shh signaling during the CNS patterning in Xenopus laevis through interaction with the transcription factor Gli1., Martynova NY., Dev Biol. August 1, 2013; 380 (1): 37-48.
	Homeoprotein hhex-induced conversion of intestinal to ventral pancreatic precursors results in the formation of giant pancreata in Xenopus embryos., Zhao H., Proc Natl Acad Sci U S A. May 29, 2012; 109 (22): 8594-9.
	Genomic targets of Brachyury (T) in differentiating mouse embryonic stem cells., Evans AL., PLoS One. January 1, 2012; 7 (3): e33346.
	A revised model of Xenopus dorsal midline development: differential and separable requirements for Notch and Shh signaling., Peyrot SM., Dev Biol. April 15, 2011; 352 (2): 254-66.
	Functional analysis of Rfx6 and mutant variants associated with neonatal diabetes., Pearl EJ., Dev Biol. March 1, 2011; 351 (1): 135-45.
	Retinoic acid is a key regulatory switch determining the difference between lung and thyroid fates in Xenopus laevis., Wang JH., BMC Dev Biol. January 26, 2011; 11 75.
	MID1 and MID2 are required for Xenopus neural tube closure through the regulation of microtubule organization., Suzuki M., Development. July 1, 2010; 137 (14): 2329-39.
	Evolutionary origin of the Otx2 enhancer for its expression in visceral endoderm., Kurokawa D., Dev Biol. June 1, 2010; 342 (1): 110-20.
	Sfrp5 coordinates foregut specification and morphogenesis by antagonizing both canonical and noncanonical Wnt11 signaling., Li Y., Genes Dev. November 1, 2008; 22 (21): 3050-63.
	Upstream stimulatory factors, USF1 and USF2 are differentially expressed during Xenopus embryonic development., Fujimi TJ., Gene Expr Patterns. July 1, 2008; 8 (6): 376-381.
	The Gata5 target, TGIF2, defines the pancreatic region by modulating BMP signals within the endoderm., Spagnoli FM., Development. February 1, 2008; 135 (3): 451-61.
	Repression of Wnt/beta-catenin signaling in the anterior endoderm is essential for liver and pancreas development., McLin VA., Development. June 1, 2007; 134 (12): 2207-17.
	Evolution of axis specification mechanisms in jawed vertebrates: insights from a chondrichthyan., Coolen M., PLoS One. April 18, 2007; 2 (4): e374.
	PP2A:B56epsilon is required for eye induction and eye field separation., Rorick AM., Dev Biol. February 15, 2007; 302 (2): 477-93.
	Negative regulation of Hedgehog signaling by the cholesterogenic enzyme 7-dehydrocholesterol reductase., Koide T., Development. June 1, 2006; 133 (12): 2395-405.
	Global analysis of the transcriptional network controlling Xenopus endoderm formation., Sinner D., Development. May 1, 2006; 133 (10): 1955-66.
	The Vg1-related protein Gdf3 acts in a Nodal signaling pathway in the pre-gastrulation mouse embryo., Chen C., Development. January 1, 2006; 133 (2): 319-29.
	GATA4, 5 and 6 mediate TGFbeta maintenance of endodermal gene expression in Xenopus embryos., Afouda BA., Development. February 1, 2005; 132 (4): 763-74.
	Of Fox and Frogs: Fox (fork head/winged helix) transcription factors in Xenopus development., Pohl BS., Gene. January 3, 2005; 344 21-32.
	Sox17 and beta-catenin cooperate to regulate the transcription of endodermal genes., Sinner D., Development. July 1, 2004; 131 (13): 3069-80.
	Smad2 and Smad3 coordinately regulate craniofacial and endodermal development., Liu Y., Dev Biol. June 15, 2004; 270 (2): 411-26.
	Analysis of Spemann organizer formation in Xenopus embryos by cDNA macroarrays., Wessely O., Dev Biol. May 15, 2004; 269 (2): 552-66.
	Notch signaling can regulate endoderm formation in zebrafish., Kikuchi Y., Dev Dyn. April 1, 2004; 229 (4): 756-62.
	Inhibition of mesodermal fate by Xenopus HNF3beta/FoxA2., Suri C., Dev Biol. January 1, 2004; 265 (1): 90-104.

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