Papers associated with primary germ layer (and lhx1)

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	Xenopus Ssbp2 is required for embryonic pronephros morphogenesis and terminal differentiation., Cervino AS., Sci Rep. October 4, 2023; 13 (1): 16671.
	Retinoic acid control of pax8 during renal specification of Xenopus pronephros involves hox and meis3., Durant-Vesga J., Dev Biol. January 1, 2023; 493 17-28.
	Hnf1b renal expression directed by a distal enhancer responsive to Pax8., Goea L., Sci Rep. November 19, 2022; 12 (1): 19921.
	Evo-Devo of Urbilateria and its larval forms., De Robertis EM., Dev Biol. July 1, 2022; 487 10-20.
	Uncovering the mesendoderm gene regulatory network through multi-omic data integration., Jansen C., Cell Rep. February 15, 2022; 38 (7): 110364.
	Retinoic Acid is Required for Normal Morphogenetic Movements During Gastrulation., Gur M., Front Cell Dev Biol. January 1, 2022; 10 857230.
	The enpp4 ectonucleotidase regulates kidney patterning signalling networks in Xenopus embryos., Massé K., Commun Biol. October 7, 2021; 4 (1): 1158.
	Temporal transcriptomic profiling reveals dynamic changes in gene expression of Xenopus animal cap upon activin treatment., Satou-Kobayashi Y., Sci Rep. July 15, 2021; 11 (1): 14537.
	The Wnt/PCP formin Daam1 drives cell-cell adhesion during nephron development., Krneta-Stankic V., Cell Rep. July 6, 2021; 36 (1): 109340.
	Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., Bright AR., EMBO J. May 3, 2021; 40 (9): e104913.
	Establishing embryonic territories in the context of Wnt signaling., Velloso I., Int J Dev Biol. January 1, 2021; 65 (4-5-6): 227-233.
	TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis., Chen M., Elife. September 14, 2020; 9
	Natural size variation among embryos leads to the corresponding scaling in gene expression., Leibovich A., Dev Biol. June 15, 2020; 462 (2): 165-179.
	Evolution of cis-regulatory modules for the head organizer gene goosecoid in chordates: comparisons between Branchiostoma and Xenopus., Yasuoka Y., Zoological Lett. August 2, 2019; 5 27.
	Arid3a regulates nephric tubule regeneration via evolutionarily conserved regeneration signal-response enhancers., Suzuki N., Elife. January 8, 2019; 8
	Dynamin Binding Protein Is Required for Xenopus laevis Kidney Development., DeLay BD., Front Physiol. January 1, 2019; 10 143.
	The Lhx1-Ldb1 complex interacts with Furry to regulate microRNA expression during pronephric kidney development., Espiritu EB., Sci Rep. October 30, 2018; 8 (1): 16029.
	Retinoic acid-induced expression of Hnf1b and Fzd4 is required for pancreas development in Xenopus laevis., Gere-Becker MB., Development. June 8, 2018; 145 (12):
	Tissue-Specific Gene Inactivation in Xenopus laevis: Knockout of lhx1 in the Kidney with CRISPR/Cas9., DeLay BD., Genetics. February 1, 2018; 208 (2): 673-686.
	A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates., Plouhinec JL., PLoS Biol. October 19, 2017; 15 (10): e2004045.
	Xenopus pitx3 target genes lhx1 and xnr5 are identified using a novel three-fluor flow cytometry-based analysis of promoter activation and repression., Hooker LN., Dev Dyn. September 1, 2017; 246 (9): 657-669.
	Peroxiredoxin1, a novel regulator of pronephros development, influences retinoic acid and Wnt signaling by controlling ROS levels., Chae S., Sci Rep. August 21, 2017; 7 (1): 8874.
	A gene regulatory program controlling early Xenopus mesendoderm formation: Network conservation and motifs., Charney RM., Semin Cell Dev Biol. June 1, 2017; 66 12-24.
	Spemann organizer transcriptome induction by early beta-catenin, Wnt, Nodal, and Siamois signals in Xenopus laevis., Ding Y., Proc Natl Acad Sci U S A. April 11, 2017; 114 (15): E3081-E3090.
	Activation of a T-box-Otx2-Gsc gene network independent of TBP and TBP-related factors., Gazdag E., Development. April 15, 2016; 143 (8): 1340-50.
	Specification of anteroposterior axis by combinatorial signaling during Xenopus development., Carron C., Wiley Interdiscip Rev Dev Biol. January 1, 2016; 5 (2): 150-68.
	Hspa9 is required for pronephros specification and formation in Xenopus laevis., Gassié L., Dev Dyn. December 1, 2015; 244 (12): 1538-49.
	Kruppel-like factor family genes are expressed during Xenopus embryogenesis and involved in germ layer formation and body axis patterning., Gao Y., Dev Dyn. October 1, 2015; 244 (10): 1328-46.
	Early neural ectodermal genes are activated by Siamois and Twin during blastula stages., Klein SL., Genesis. May 1, 2015; 53 (5): 308-20.
	TRPP2-dependent Ca2+ signaling in dorso-lateral mesoderm is required for kidney field establishment in Xenopus., Futel M., J Cell Sci. March 1, 2015; 128 (5): 888-99.
	E2a is necessary for Smad2/3-dependent transcription and the direct repression of lefty during gastrulation., Wills AE., Dev Cell. February 9, 2015; 32 (3): 345-57.
	Pax8 and Pax2 are specifically required at different steps of Xenopus pronephros development., Buisson I., Dev Biol. January 15, 2015; 397 (2): 175-90.
	Heat shock 70-kDa protein 5 (Hspa5) is essential for pronephros formation by mediating retinoic acid signaling., Shi W., J Biol Chem. January 2, 2015; 290 (1): 577-89.
	Two different network topologies yield bistability in models of mesoderm and anterior mesendoderm specification in amphibians., Brown LE., J Theor Biol. July 21, 2014; 353 67-77.
	Occupancy of tissue-specific cis-regulatory modules by Otx2 and TLE/Groucho for embryonic head specification., Yasuoka Y., Nat Commun. July 9, 2014; 5 4322.
	The Wnt/JNK signaling target gene alcam is required for embryonic kidney development., Cizelsky W., Development. May 1, 2014; 141 (10): 2064-74.
	Inference of the Xenopus tropicalis embryonic regulatory network and spatial gene expression patterns., Zheng Z., BMC Syst Biol. January 8, 2014; 8 3.
	Comparative expression analysis of cysteine-rich intestinal protein family members crip1, 2 and 3 during Xenopus laevis embryogenesis., Hempel A., Int J Dev Biol. January 1, 2014; 58 (10-12): 841-9.
	A conserved Oct4/POUV-dependent network links adhesion and migration to progenitor maintenance., Livigni A., Curr Biol. November 18, 2013; 23 (22): 2233-2244.
	Dhrs3 protein attenuates retinoic acid signaling and is required for early embryonic patterning., Kam RK., J Biol Chem. November 1, 2013; 288 (44): 31477-87.
	ANKS6 is a central component of a nephronophthisis module linking NEK8 to INVS and NPHP3., Hoff S., Nat Genet. August 1, 2013; 45 (8): 951-6.
	Optimal histone H3 to linker histone H1 chromatin ratio is vital for mesodermal competence in Xenopus., Lim CY., Development. February 1, 2013; 140 (4): 853-60.
	Comparative Functional Analysis of ZFP36 Genes during Xenopus Development., Tréguer K., PLoS One. January 1, 2013; 8 (1): e54550.
	Variation in the schedules of somite and neural development in frogs., Sáenz-Ponce N., Proc Natl Acad Sci U S A. December 11, 2012; 109 (50): 20503-7.
	Retinoic acid-dependent control of MAP kinase phosphatase-3 is necessary for early kidney development in Xenopus., Le Bouffant R., Biol Cell. September 1, 2012; 104 (9): 516-32.
	Gastrulation and pre-gastrulation morphogenesis, inductions, and gene expression: similarities and dissimilarities between urodelean and anuran embryos., Kaneda T., Dev Biol. September 1, 2012; 369 (1): 1-18.
	Microarray-based identification of Pitx3 targets during Xenopus embryogenesis., Hooker L., Dev Dyn. September 1, 2012; 241 (9): 1487-505.
	Suppression of Bmp4 signaling by the zinc-finger repressors Osr1 and Osr2 is required for Wnt/β-catenin-mediated lung specification in Xenopus., Rankin SA, Rankin SA., Development. August 1, 2012; 139 (16): 3010-20.
	Tiki1 is required for head formation via Wnt cleavage-oxidation and inactivation., Zhang X., Cell. June 22, 2012; 149 (7): 1565-77.
	Plasma membrane cholesterol depletion disrupts prechordal plate and affects early forebrain patterning., Reis AH., Dev Biol. May 15, 2012; 365 (2): 350-62.

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